RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CARMIL3Q8ND23 1372 aa20.6■□□□□ 0.89
SMC6-206ENST00000446852 FIBPO43427 364 aa20.6■□□□□ 0.89
SMC6-206ENST00000446852 TM4SF1P30408 202 aa20.6■□□□□ 0.89
SMC6-206ENST00000446852 MCM5P33992 734 aa20.6■□□□□ 0.89
SMC6-206ENST00000446852 CCT2P78371 535 aaKnown RBP20.6■□□□□ 0.89
SMC6-206ENST00000446852 NFIXQ14938 502 aa20.6■□□□□ 0.89
SMC6-206ENST00000446852 NKX2-3Q8TAU0 364 aa20.6■□□□□ 0.89
SMC6-206ENST00000446852 DDX11Q96FC9 970 aa20.6■□□□□ 0.89
SMC6-206ENST00000446852 ZNF274Q96GC6 653 aaPredicted RBP20.6■□□□□ 0.89
SMC6-206ENST00000446852 LLPHQ9BRT6 129 aaKnown RBP20.6■□□□□ 0.89
SMC6-206ENST00000446852 NCOA5Q9HCD5 579 aaKnown RBP20.6■□□□□ 0.89
SMC6-206ENST00000446852 EVCP57679 992 aa20.6■□□□□ 0.89
SMC6-206ENST00000446852 MYH15Q9Y2K3 1946 aa20.6■□□□□ 0.89
SMC6-206ENST00000446852 KLRK1P26718 216 aa20.59■□□□□ 0.89
SMC6-206ENST00000446852 RALYLQ86SE5 291 aaKnown RBP20.59■□□□□ 0.89
SMC6-206ENST00000446852 FAM84BQ96KN1 310 aaPredicted RBP20.59■□□□□ 0.89
SMC6-206ENST00000446852 LRP2BPQ9P2M1 347 aa20.59■□□□□ 0.89
SMC6-206ENST00000446852 TIAM2Q8IVF5 1701 aa20.59■□□□□ 0.89
SMC6-206ENST00000446852 ZMYM6O95789 1325 aa20.59■□□□□ 0.89
SMC6-206ENST00000446852 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
SMC6-206ENST00000446852 NAP1L2Q9ULW6 460 aaPredicted RBP20.59■□□□□ 0.89
SMC6-206ENST00000446852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.58■□□□□ 0.89
SMC6-206ENST00000446852 ALX1Q15699 326 aa20.58■□□□□ 0.89
SMC6-206ENST00000446852 FAM173BQ6P4H8 233 aa20.58■□□□□ 0.89
SMC6-206ENST00000446852 LCORLQ8N3X6 602 aa20.58■□□□□ 0.89
SMC6-206ENST00000446852 PATL2C9JE40 543 aaKnown RBP20.58■□□□□ 0.88
SMC6-206ENST00000446852 IFNL3Q8IZI9 196 aa20.58■□□□□ 0.88
SMC6-206ENST00000446852 GNL3LQ9NVN8 582 aaKnown RBP20.58■□□□□ 0.88
SMC6-206ENST00000446852 SALL1Q9NSC2 1324 aa20.57■□□□□ 0.88
SMC6-206ENST00000446852 PTPDC1A2A3K4 754 aa20.57■□□□□ 0.88
SMC6-206ENST00000446852 CAVIN4Q5BKX8 364 aa20.57■□□□□ 0.88
SMC6-206ENST00000446852 ADGRA1Q86SQ6 560 aa20.57■□□□□ 0.88
SMC6-206ENST00000446852 WDR19Q8NEZ3 1342 aa20.57■□□□□ 0.88
SMC6-206ENST00000446852 GSG1L2A8MUP6 293 aa20.56■□□□□ 0.88
SMC6-206ENST00000446852 PRKAB2O43741 272 aa20.56■□□□□ 0.88
SMC6-206ENST00000446852 ADRA2BP18089 450 aa20.56■□□□□ 0.88
SMC6-206ENST00000446852 MIGA1Q8NAN2 632 aa20.56■□□□□ 0.88
SMC6-206ENST00000446852 ABCF2Q9UG63 623 aa20.56■□□□□ 0.88
SMC6-206ENST00000446852 PNPLA7Q6ZV29 1317 aa20.56■□□□□ 0.88
SMC6-206ENST00000446852 NPHP1O15259 732 aa20.56■□□□□ 0.88
SMC6-206ENST00000446852 KRT27Q7Z3Y8 459 aa20.56■□□□□ 0.88
SMC6-206ENST00000446852 SYCE3A1L190 88 aa20.55■□□□□ 0.88
SMC6-206ENST00000446852 CYB5R4Q7L1T6 521 aa20.55■□□□□ 0.88
SMC6-206ENST00000446852 FBXO33Q7Z6M2 555 aa20.55■□□□□ 0.88
SMC6-206ENST00000446852 SLC51AQ86UW1 340 aa20.55■□□□□ 0.88
SMC6-206ENST00000446852 VPS37DQ86XT2 251 aa20.55■□□□□ 0.88
SMC6-206ENST00000446852 NEDD4P46934 1319 aa20.55■□□□□ 0.88
SMC6-206ENST00000446852 TRIM37O94972 964 aa20.55■□□□□ 0.88
SMC6-206ENST00000446852 UBE2HP62256 183 aa20.55■□□□□ 0.88
SMC6-206ENST00000446852 FAM184AQ8NB25 1140 aa20.55■□□□□ 0.88
SMC6-206ENST00000446852 NAPBQ9H115 298 aa20.55■□□□□ 0.88
SMC6-206ENST00000446852 KLF18A0A0U1RQI7 1052 aa20.54■□□□□ 0.88
SMC6-206ENST00000446852 PPFIA3O75145 1194 aa20.54■□□□□ 0.88
SMC6-206ENST00000446852 TRDNQ13061 729 aa20.54■□□□□ 0.88
SMC6-206ENST00000446852 CNBD1Q8NA66 436 aa20.54■□□□□ 0.88
SMC6-206ENST00000446852 HPS5Q9UPZ3 1129 aa20.54■□□□□ 0.88
SMC6-206ENST00000446852 CYP7A1P22680 504 aa20.54■□□□□ 0.88
SMC6-206ENST00000446852 HMGN5P82970 282 aaKnown RBP20.54■□□□□ 0.88
SMC6-206ENST00000446852 ANKRD2Q9GZV1 360 aa20.54■□□□□ 0.88
SMC6-206ENST00000446852 INCENPQ9NQS7 918 aa20.54■□□□□ 0.88
SMC6-206ENST00000446852 TACC3Q9Y6A5 838 aa20.54■□□□□ 0.88
SMC6-206ENST00000446852 GYS1P13807 737 aa20.53■□□□□ 0.88
SMC6-206ENST00000446852 SLC27A3Q5K4L6 730 aa20.53■□□□□ 0.88
SMC6-206ENST00000446852 RAI14Q9P0K7 980 aa20.53■□□□□ 0.88
SMC6-206ENST00000446852 SLC4A4Q9Y6R1 1079 aa20.53■□□□□ 0.88
SMC6-206ENST00000446852 BAZ2AQ9UIF9 1905 aaKnown RBP20.53■□□□□ 0.88
SMC6-206ENST00000446852 GOLGA8BA8MQT2 603 aa20.53■□□□□ 0.88
SMC6-206ENST00000446852 B4E1Z4 1266 aa20.53■□□□□ 0.88
SMC6-206ENST00000446852 KRT85P78386 507 aa20.53■□□□□ 0.88
SMC6-206ENST00000446852 CTDSPL2Q05D32 466 aa20.53■□□□□ 0.88
SMC6-206ENST00000446852 RESTQ13127 1097 aa20.53■□□□□ 0.88
SMC6-206ENST00000446852 TPRNQ4KMQ1 711 aa20.53■□□□□ 0.88
SMC6-206ENST00000446852 TFCP2L1Q9NZI6 479 aa20.53■□□□□ 0.88
SMC6-206ENST00000446852 GNAT2P19087 354 aa20.52■□□□□ 0.88
SMC6-206ENST00000446852 PRR5LQ6MZQ0 368 aa20.52■□□□□ 0.88
SMC6-206ENST00000446852 TTC6Q86TZ1 520 aa20.52■□□□□ 0.88
SMC6-206ENST00000446852 ZNF384Q8TF68 577 aa20.52■□□□□ 0.88
SMC6-206ENST00000446852 CCDC88AQ3V6T2 1871 aa20.52■□□□□ 0.88
SMC6-206ENST00000446852 H3BQV1 296 aa20.52■□□□□ 0.88
SMC6-206ENST00000446852 CSPP1Q1MSJ5 1256 aa20.52■□□□□ 0.88
SMC6-206ENST00000446852 IFFO2Q5TF58 517 aa20.52■□□□□ 0.88
SMC6-206ENST00000446852 LRSAM1Q6UWE0 723 aa20.52■□□□□ 0.88
SMC6-206ENST00000446852 RAB11FIP4Q86YS3 637 aa20.52■□□□□ 0.88
SMC6-206ENST00000446852 IRS2Q9Y4H2 1338 aa20.52■□□□□ 0.88
SMC6-206ENST00000446852 FDPSP14324 419 aaKnown RBP20.51■□□□□ 0.87
SMC6-206ENST00000446852 TXNRD3Q86VQ6 643 aa20.51■□□□□ 0.87
SMC6-206ENST00000446852 SYAP1Q96A49 352 aaPredicted RBP20.51■□□□□ 0.87
SMC6-206ENST00000446852 ANGEL1Q9UNK9 670 aaKnown RBP20.51■□□□□ 0.87
SMC6-206ENST00000446852 MAST2Q6P0Q8 1798 aa20.51■□□□□ 0.87
SMC6-206ENST00000446852 SH2B2O14492 632 aaPredicted RBP20.51■□□□□ 0.87
SMC6-206ENST00000446852 FOSBP53539 338 aa20.51■□□□□ 0.87
SMC6-206ENST00000446852 SEMA3EO15041 775 aa20.5■□□□□ 0.87
SMC6-206ENST00000446852 HIBADHP31937 336 aaKnown RBP20.5■□□□□ 0.87
SMC6-206ENST00000446852 TDO2P48775 406 aa20.5■□□□□ 0.87
SMC6-206ENST00000446852 NAA16Q6N069 864 aaPredicted RBP20.5■□□□□ 0.87
SMC6-206ENST00000446852 ECM29Q5VYK3 1845 aa20.5■□□□□ 0.87
SMC6-206ENST00000446852 GRAPQ13588 217 aa20.5■□□□□ 0.87
SMC6-206ENST00000446852 GRAPLQ8TC17 118 aaPredicted RBP20.5■□□□□ 0.87
SMC6-206ENST00000446852 RIOK1Q9BRS2 568 aaKnown RBP20.5■□□□□ 0.87
SMC6-206ENST00000446852 NACAP1Q9BZK3 213 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms