RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 AMIGO3Q86WK7 504 aa6.65□□□□□ -1.34
PTPN4-206ENST00000441089 EDARADDQ8WWZ3 215 aa6.65□□□□□ -1.34
PTPN4-206ENST00000441089 PCMTD1Q96MG8 357 aaPredicted RBP6.65□□□□□ -1.34
PTPN4-206ENST00000441089 WDR33Q9C0J8 1336 aaKnown RBP6.65□□□□□ -1.35
PTPN4-206ENST00000441089 CA12O43570 354 aa6.64□□□□□ -1.35
PTPN4-206ENST00000441089 FBXO45P0C2W1 286 aa6.64□□□□□ -1.35
PTPN4-206ENST00000441089 RFC5P40937 340 aa6.64□□□□□ -1.35
PTPN4-206ENST00000441089 PHKA2P46019 1235 aa6.64□□□□□ -1.35
PTPN4-206ENST00000441089 MAP2K3P46734 347 aa6.64□□□□□ -1.35
PTPN4-206ENST00000441089 BRPF1P55201 1214 aaPredicted RBP6.64□□□□□ -1.35
PTPN4-206ENST00000441089 FOXD4L6Q3SYB3 417 aaPredicted RBP6.64□□□□□ -1.35
PTPN4-206ENST00000441089 CC2D2BQ6DHV5 1058 aa6.64□□□□□ -1.35
PTPN4-206ENST00000441089 FOXD4L3Q6VB84 417 aaPredicted RBP6.64□□□□□ -1.35
PTPN4-206ENST00000441089 LDHDQ86WU2 507 aa6.64□□□□□ -1.35
PTPN4-206ENST00000441089 CGNL1Q0VF96 1302 aa6.64□□□□□ -1.35
PTPN4-206ENST00000441089 THSD7BQ9C0I4 1608 aa6.64□□□□□ -1.35
PTPN4-206ENST00000441089 IQCA1LA6NCM1 817 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 TRAK2O60296 914 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 IL2RAP01589 272 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 RGPD2P0DJD1 1756 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 ECE1P42892 770 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 DGKZQ13574 1117 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 NBPF1Q3BBV0 1214 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 TRAPPC3LQ5T215 181 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 MPRIPQ6WCQ1 1025 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 TAS1R3Q7RTX0 852 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 KRTAP4-12Q9BQ66 201 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 CFHR5Q9BXR6 569 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 PCDHB9Q9Y5E1 797 aa6.63□□□□□ -1.35
PTPN4-206ENST00000441089 TRPM7Q96QT4 1865 aa6.62□□□□□ -1.35
PTPN4-206ENST00000441089 USP31Q70CQ4 1352 aa6.62□□□□□ -1.35
PTPN4-206ENST00000441089 CTBSQ01459 385 aa6.62□□□□□ -1.35
PTPN4-206ENST00000441089 TPRNQ4KMQ1 711 aa6.62□□□□□ -1.35
PTPN4-206ENST00000441089 PNMA1Q8ND90 353 aa6.62□□□□□ -1.35
PTPN4-206ENST00000441089 ABHD17AQ96GS6 310 aa6.62□□□□□ -1.35
PTPN4-206ENST00000441089 NLRP3Q96P20 1036 aa6.62□□□□□ -1.35
PTPN4-206ENST00000441089 RUBCNLQ9H714 662 aa6.62□□□□□ -1.35
PTPN4-206ENST00000441089 NSFL1CQ9UNZ2 370 aaKnown RBP6.62□□□□□ -1.35
PTPN4-206ENST00000441089 RTCBQ9Y3I0 505 aaKnown RBP6.62□□□□□ -1.35
PTPN4-206ENST00000441089 DLEC1Q9Y238 1755 aa6.62□□□□□ -1.35
PTPN4-206ENST00000441089 MON2Q7Z3U7 1717 aa6.62□□□□□ -1.35
PTPN4-206ENST00000441089 CENPJQ9HC77 1338 aaPredicted RBP6.61□□□□□ -1.35
PTPN4-206ENST00000441089 LOC102724428A0A0B4J2F2 783 aa6.61□□□□□ -1.35
PTPN4-206ENST00000441089 DLL1O00548 723 aa6.61□□□□□ -1.35
PTPN4-206ENST00000441089 HSPA5P11021 654 aaKnown RBP6.61□□□□□ -1.35
PTPN4-206ENST00000441089 SIK1P57059 783 aa6.61□□□□□ -1.35
PTPN4-206ENST00000441089 DOC2BQ14184 412 aa6.61□□□□□ -1.35
PTPN4-206ENST00000441089 WDR44Q5JSH3 913 aa6.61□□□□□ -1.35
PTPN4-206ENST00000441089 LINC00116Q8NCU8 138 aa6.61□□□□□ -1.35
PTPN4-206ENST00000441089 IP6K1Q92551 441 aa6.61□□□□□ -1.35
PTPN4-206ENST00000441089 NDFIP2Q9NV92 336 aa6.61□□□□□ -1.35
PTPN4-206ENST00000441089 GGA1Q9UJY5 639 aa6.61□□□□□ -1.35
PTPN4-206ENST00000441089 ABT1Q9ULW3 272 aaKnown RBP6.61□□□□□ -1.35
PTPN4-206ENST00000441089 HRH3Q9Y5N1 445 aa6.61□□□□□ -1.35
PTPN4-206ENST00000441089 FER1L6Q2WGJ9 1857 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 ROCK2O75116 1388 aaKnown RBP6.6□□□□□ -1.35
PTPN4-206ENST00000441089 KTN1Q86UP2 1357 aaKnown RBP6.6□□□□□ -1.35
PTPN4-206ENST00000441089 PCDH11XQ9BZA7 1347 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 PCDH11YQ9BZA8 1340 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 LTBP1Q14766 1721 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 STAU1O95793 577 aaKnown RBP6.6□□□□□ -1.35
PTPN4-206ENST00000441089 GYS1P13807 737 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 RFC4P35249 363 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 MAP2K2P36507 400 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 DGKGP49619 791 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 SOX10P56693 466 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 TMEM259Q4ZIN3 620 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 HABP4Q5JVS0 413 aaKnown RBP6.6□□□□□ -1.35
PTPN4-206ENST00000441089 IL27Q8NEV9 243 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 RAPGEF4Q8WZA2 1011 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 CAPNS2Q96L46 248 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 GPR101Q96P66 508 aaPredicted RBP6.6□□□□□ -1.35
PTPN4-206ENST00000441089 SEMA6BQ9H3T3 888 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 MEGF6O75095 1541 aa6.6□□□□□ -1.35
PTPN4-206ENST00000441089 SMG6Q86US8 1419 aaKnown RBP6.59□□□□□ -1.35
PTPN4-206ENST00000441089 ZBBXA8MT70 800 aa6.59□□□□□ -1.35
PTPN4-206ENST00000441089 BNIP3LO60238 219 aa6.59□□□□□ -1.35
PTPN4-206ENST00000441089 GPR37L1O60883 481 aa6.59□□□□□ -1.35
PTPN4-206ENST00000441089 CHRNA5P30532 468 aa6.59□□□□□ -1.35
PTPN4-206ENST00000441089 CENPCQ03188 943 aa6.59□□□□□ -1.35
PTPN4-206ENST00000441089 SLCO4C1Q6ZQN7 724 aa6.59□□□□□ -1.35
PTPN4-206ENST00000441089 LTV1Q96GA3 475 aaPredicted RBP6.59□□□□□ -1.35
PTPN4-206ENST00000441089 BTBD6Q96KE9 485 aa6.59□□□□□ -1.35
PTPN4-206ENST00000441089 CARD11Q9BXL7 1154 aa6.59□□□□□ -1.35
PTPN4-206ENST00000441089 KIAA0100Q14667 2235 aaKnown RBP6.59□□□□□ -1.35
PTPN4-206ENST00000441089 COL6A3P12111 3177 aa6.59□□□□□ -1.35
PTPN4-206ENST00000441089 MKI67P46013 3256 aaKnown RBP6.59□□□□□ -1.35
PTPN4-206ENST00000441089 CD163L1Q9NR16 1453 aa6.59□□□□□ -1.36
PTPN4-206ENST00000441089 SZT2Q5T011 3432 aa6.59□□□□□ -1.36
PTPN4-206ENST00000441089 MYH14Q7Z406 1995 aaKnown RBP6.58□□□□□ -1.36
PTPN4-206ENST00000441089 ZNF831Q5JPB2 1677 aa6.58□□□□□ -1.36
PTPN4-206ENST00000441089 EVC2Q86UK5 1308 aa6.58□□□□□ -1.36
PTPN4-206ENST00000441089 AFDNP55196 1824 aaKnown RBP6.58□□□□□ -1.36
PTPN4-206ENST00000441089 TATP17735 454 aaPredicted RBP6.58□□□□□ -1.36
PTPN4-206ENST00000441089 EIF4G2P78344 907 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTPN4-206ENST00000441089 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
PTPN4-206ENST00000441089 CYP2U1Q7Z449 544 aa6.58□□□□□ -1.36
PTPN4-206ENST00000441089 ALYREFQ86V81 257 aaKnown RBP6.58□□□□□ -1.36
PTPN4-206ENST00000441089 GOLGA6L1Q8N7Z2 621 aa6.58□□□□□ -1.36
PTPN4-206ENST00000441089 TTLL6Q8N841 843 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms