RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 NF2P35240 595 aa25.77■■□□□ 1.72
VIL1-204ENST00000440053 TFCP2Q12800 502 aa25.77■■□□□ 1.72
VIL1-204ENST00000440053 NBPF12Q5TAG4 269 aaPredicted RBP25.76■■□□□ 1.71
VIL1-204ENST00000440053 TBC1D22AQ8WUA7 517 aa25.76■■□□□ 1.71
VIL1-204ENST00000440053 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.76■■□□□ 1.71
VIL1-204ENST00000440053 PHKA1P46020 1223 aa25.75■■□□□ 1.71
VIL1-204ENST00000440053 RASA3Q14644 834 aa25.75■■□□□ 1.71
VIL1-204ENST00000440053 SPDYE2Q495Y8 402 aa25.75■■□□□ 1.71
VIL1-204ENST00000440053 CSRNP1Q96S65 589 aa25.75■■□□□ 1.71
VIL1-204ENST00000440053 PAPPA2Q9BXP8 1791 aa25.74■■□□□ 1.71
VIL1-204ENST00000440053 C1orf115Q9H7X2 142 aa25.74■■□□□ 1.71
VIL1-204ENST00000440053 ANGEL1Q9UNK9 670 aaKnown RBP25.74■■□□□ 1.71
VIL1-204ENST00000440053 COL1A1P02452 1464 aaPredicted RBP25.73■■□□□ 1.71
VIL1-204ENST00000440053 TCP10L2B9ZVM9 353 aa25.73■■□□□ 1.71
VIL1-204ENST00000440053 CAPN15O75808 1086 aa25.73■■□□□ 1.71
VIL1-204ENST00000440053 MKRN3Q13064 507 aaKnown RBP25.73■■□□□ 1.71
VIL1-204ENST00000440053 FTSJ3Q8IY81 847 aaKnown RBP25.73■■□□□ 1.71
VIL1-204ENST00000440053 ARMC9Q7Z3E5 817 aa25.72■■□□□ 1.71
VIL1-204ENST00000440053 ITPRIPQ8IWB1 547 aa25.72■■□□□ 1.71
VIL1-204ENST00000440053 CDAN1Q8IWY9 1227 aa25.72■■□□□ 1.71
VIL1-204ENST00000440053 ZBTB7BO15156 539 aaPredicted RBP25.72■■□□□ 1.71
VIL1-204ENST00000440053 CACNB3P54284 484 aa25.72■■□□□ 1.71
VIL1-204ENST00000440053 SSC5DA1L4H1 1573 aa25.71■■□□□ 1.71
VIL1-204ENST00000440053 LDLRAD1Q5T700 205 aa25.71■■□□□ 1.71
VIL1-204ENST00000440053 CCDC102BQ68D86 513 aa25.71■■□□□ 1.71
VIL1-204ENST00000440053 WDR66Q8TBY9 1149 aa25.71■■□□□ 1.71
VIL1-204ENST00000440053 PANK1Q8TE04 598 aa25.71■■□□□ 1.71
VIL1-204ENST00000440053 TEKT1Q969V4 418 aa25.71■■□□□ 1.71
VIL1-204ENST00000440053 PPP2R3BQ9Y5P8 575 aa25.71■■□□□ 1.71
VIL1-204ENST00000440053 A0A1B0GUL7 405 aa25.7■■□□□ 1.7
VIL1-204ENST00000440053 TRPA1O75762 1119 aa25.7■■□□□ 1.7
VIL1-204ENST00000440053 HDLBPQ00341 1268 aaKnown RBP25.7■■□□□ 1.7
VIL1-204ENST00000440053 GNL3LQ9NVN8 582 aaKnown RBP25.7■■□□□ 1.7
VIL1-204ENST00000440053 RNF186Q9NXI6 227 aa25.7■■□□□ 1.7
VIL1-204ENST00000440053 APOBEC3HQ6NTF7 200 aaKnown RBP25.69■■□□□ 1.7
VIL1-204ENST00000440053 XAGE2Q96GT9 111 aa25.69■■□□□ 1.7
VIL1-204ENST00000440053 NEUROD6Q96NK8 337 aa25.69■■□□□ 1.7
VIL1-204ENST00000440053 MRIQ9BWK5 157 aa25.69■■□□□ 1.7
VIL1-204ENST00000440053 TMEM39BQ9GZU3 492 aa25.69■■□□□ 1.7
VIL1-204ENST00000440053 CA12O43570 354 aa25.68■■□□□ 1.7
VIL1-204ENST00000440053 USP2O75604 605 aaPredicted RBP25.68■■□□□ 1.7
VIL1-204ENST00000440053 PRDX5P30044 214 aa25.68■■□□□ 1.7
VIL1-204ENST00000440053 ATP8B2P98198 1209 aa25.68■■□□□ 1.7
VIL1-204ENST00000440053 G3BP1Q13283 466 aaKnown RBP eCLIP25.68■■□□□ 1.71e-9■■□□□ 12.7
VIL1-204ENST00000440053 SUPT20HL1Q3ZLR7 823 aa25.68■■□□□ 1.7
VIL1-204ENST00000440053 CLMNQ96JQ2 1002 aa25.68■■□□□ 1.7
VIL1-204ENST00000440053 ZDHHC15Q96MV8 337 aa25.68■■□□□ 1.7
VIL1-204ENST00000440053 TEPSINQ96N21 525 aa25.68■■□□□ 1.7
VIL1-204ENST00000440053 DIXDC1Q155Q3 683 aa25.67■■□□□ 1.7
VIL1-204ENST00000440053 SUGT1Q9Y2Z0 365 aa25.67■■□□□ 1.7
VIL1-204ENST00000440053 ECM29Q5VYK3 1845 aa25.67■■□□□ 1.7
VIL1-204ENST00000440053 ARAP2Q8WZ64 1704 aa25.67■■□□□ 1.7
VIL1-204ENST00000440053 PPP1R12BO60237 982 aaPredicted RBP25.66■■□□□ 1.7
VIL1-204ENST00000440053 POLA2Q14181 598 aa25.66■■□□□ 1.7
VIL1-204ENST00000440053 DENND2AQ9ULE3 1009 aa25.66■■□□□ 1.7
VIL1-204ENST00000440053 AKAP2Q9Y2D5 859 aa25.66■■□□□ 1.7
VIL1-204ENST00000440053 TNFAIP1Q13829 316 aa25.66■■□□□ 1.7
VIL1-204ENST00000440053 MAP3K11Q16584 847 aa25.66■■□□□ 1.7
VIL1-204ENST00000440053 HHIPL2Q6UWX4 724 aa25.66■■□□□ 1.7
VIL1-204ENST00000440053 SLC10A4Q96EP9 437 aa25.66■■□□□ 1.7
VIL1-204ENST00000440053 RASGRF1Q13972 1273 aa25.65■■□□□ 1.7
VIL1-204ENST00000440053 SSH3Q8TE77 659 aa25.65■■□□□ 1.7
VIL1-204ENST00000440053 LDHBP07195 334 aaKnown RBP25.64■■□□□ 1.69
VIL1-204ENST00000440053 MAST3O60307 1309 aa25.64■■□□□ 1.69
VIL1-204ENST00000440053 SPRYD7Q5W111 196 aa25.63■■□□□ 1.69
VIL1-204ENST00000440053 DAGLAQ9Y4D2 1042 aa25.63■■□□□ 1.69
VIL1-204ENST00000440053 SEMA3EO15041 775 aa25.62■■□□□ 1.69
VIL1-204ENST00000440053 TNNI2P48788 182 aa25.62■■□□□ 1.69
VIL1-204ENST00000440053 SAGE1Q9NXZ1 904 aa25.61■■□□□ 1.69
VIL1-204ENST00000440053 ABCF2Q9UG63 623 aa25.61■■□□□ 1.69
VIL1-204ENST00000440053 SALL1Q9NSC2 1324 aa25.61■■□□□ 1.69
VIL1-204ENST00000440053 SURF6O75683 361 aaKnown RBP25.6■■□□□ 1.69
VIL1-204ENST00000440053 IREB2P48200 963 aaKnown RBP25.6■■□□□ 1.69
VIL1-204ENST00000440053 TM4SF4P48230 202 aa25.6■■□□□ 1.69
VIL1-204ENST00000440053 MVPQ14764 893 aaKnown RBP25.6■■□□□ 1.69
VIL1-204ENST00000440053 CDC42EP5Q6NZY7 148 aa25.6■■□□□ 1.69
VIL1-204ENST00000440053 PI16Q6UXB8 463 aa25.6■■□□□ 1.69
VIL1-204ENST00000440053 GORABQ5T7V8 394 aa25.6■■□□□ 1.69
VIL1-204ENST00000440053 REM2Q8IYK8 340 aaPredicted RBP25.6■■□□□ 1.69
VIL1-204ENST00000440053 TBC1D8O95759 1140 aa25.59■■□□□ 1.69
VIL1-204ENST00000440053 GJA5P36382 358 aa25.59■■□□□ 1.69
VIL1-204ENST00000440053 OS9Q13438 667 aaPredicted RBP25.59■■□□□ 1.69
VIL1-204ENST00000440053 WNK4Q96J92 1243 aa25.59■■□□□ 1.69
VIL1-204ENST00000440053 TMOD2Q9NZR1 351 aa25.59■■□□□ 1.69
VIL1-204ENST00000440053 HMG20BQ9P0W2 317 aa25.59■■□□□ 1.69
VIL1-204ENST00000440053 MYH13Q9UKX3 1938 aa25.58■■□□□ 1.69
VIL1-204ENST00000440053 CEP85Q6P2H3 762 aa25.58■■□□□ 1.69
VIL1-204ENST00000440053 TBC1D9Q6ZT07 1266 aa25.58■■□□□ 1.69
VIL1-204ENST00000440053 USP40Q9NVE5 1235 aa25.58■■□□□ 1.69
VIL1-204ENST00000440053 RCAN3Q9UKA8 241 aa25.58■■□□□ 1.69
VIL1-204ENST00000440053 CASP8AP2Q9UKL3 1982 aa25.57■■□□□ 1.68
VIL1-204ENST00000440053 ZBTB22O15209 634 aa25.57■■□□□ 1.68
VIL1-204ENST00000440053 TCP10Q12799 353 aa25.57■■□□□ 1.68
VIL1-204ENST00000440053 NFIAQ12857 509 aa25.57■■□□□ 1.68
VIL1-204ENST00000440053 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.57■■□□□ 1.68
VIL1-204ENST00000440053 ANKRD13AQ8IZ07 590 aa25.57■■□□□ 1.68
VIL1-204ENST00000440053 ELP3Q9H9T3 547 aa25.57■■□□□ 1.68
VIL1-204ENST00000440053 TNNI3KQ59H18 835 aa25.56■■□□□ 1.68
VIL1-204ENST00000440053 FAM83AQ86UY5 434 aa25.56■■□□□ 1.68
VIL1-204ENST00000440053 CNKSR2Q8WXI2 1034 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms