RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 NAPBQ9H115 298 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 GPHNQ9NQX3 736 aaPredicted RBP12.22□□□□□ -0.45
CPNE1-218ENST00000439806 TAF1P21675 1872 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 NHSQ6T4R5 1651 aa12.22□□□□□ -0.45
CPNE1-218ENST00000439806 COL24A1Q17RW2 1714 aa12.21□□□□□ -0.45
CPNE1-218ENST00000439806 PATL2C9JE40 543 aaKnown RBP12.21□□□□□ -0.45
CPNE1-218ENST00000439806 MBD4O95243 580 aa12.21□□□□□ -0.45
CPNE1-218ENST00000439806 GUCY1B3Q02153 619 aa12.21□□□□□ -0.45
CPNE1-218ENST00000439806 VPS72Q15906 364 aa12.21□□□□□ -0.45
CPNE1-218ENST00000439806 TBC1D10CQ8IV04 446 aa12.21□□□□□ -0.45
CPNE1-218ENST00000439806 NGLY1Q96IV0 654 aa12.21□□□□□ -0.45
CPNE1-218ENST00000439806 C8orf76Q96K31 380 aa12.21□□□□□ -0.45
CPNE1-218ENST00000439806 C8orf37Q96NL8 207 aa12.21□□□□□ -0.45
CPNE1-218ENST00000439806 STRBPQ96SI9 672 aaKnown RBP12.21□□□□□ -0.45
CPNE1-218ENST00000439806 CLSTN2Q9H4D0 955 aa12.21□□□□□ -0.45
CPNE1-218ENST00000439806 GNL3LQ9NVN8 582 aaKnown RBP12.21□□□□□ -0.45
CPNE1-218ENST00000439806 ORC3Q9UBD5 711 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-218ENST00000439806 SH2B2O14492 632 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-218ENST00000439806 GNAT2P19087 354 aa12.2□□□□□ -0.46
CPNE1-218ENST00000439806 GTF2E1P29083 439 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-218ENST00000439806 BCAMP50895 628 aa12.2□□□□□ -0.46
CPNE1-218ENST00000439806 CEBPZQ03701 1054 aaKnown RBP12.2□□□□□ -0.46
CPNE1-218ENST00000439806 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
CPNE1-218ENST00000439806 CPLX2Q6PUV4 134 aaKnown RBP12.2□□□□□ -0.46
CPNE1-218ENST00000439806 RAB11FIP4Q86YS3 637 aa12.2□□□□□ -0.46
CPNE1-218ENST00000439806 PGBD1Q96JS3 809 aa12.2□□□□□ -0.46
CPNE1-218ENST00000439806 TMEM87BQ96K49 555 aa12.2□□□□□ -0.46
CPNE1-218ENST00000439806 NACAP1Q9BZK3 213 aa12.2□□□□□ -0.46
CPNE1-218ENST00000439806 ARMT1Q9H993 441 aa12.2□□□□□ -0.46
CPNE1-218ENST00000439806 DACT1Q9NYF0 836 aa12.2□□□□□ -0.46
CPNE1-218ENST00000439806 LRP2BPQ9P2M1 347 aa12.2□□□□□ -0.46
CPNE1-218ENST00000439806 USP25Q9UHP3 1055 aa12.2□□□□□ -0.46
CPNE1-218ENST00000439806 ANGEL1Q9UNK9 670 aaKnown RBP12.2□□□□□ -0.46
CPNE1-218ENST00000439806 TAF1LQ8IZX4 1826 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 B4E1Z4 1266 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 SNAP23O00161 211 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 RGL2O15211 777 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 CDKL5O76039 1030 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 FDPSP14324 419 aaKnown RBP12.19□□□□□ -0.46
CPNE1-218ENST00000439806 TDO2P48775 406 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 TYRO3Q06418 890 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 SF3B3Q15393 1217 aaKnown RBP12.19□□□□□ -0.46
CPNE1-218ENST00000439806 CAMK4Q16566 473 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 NFXL1Q6ZNB6 911 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 CCDC73Q6ZRK6 1079 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 CYB5R4Q7L1T6 521 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 IFNL3Q8IZI9 196 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 NAP1L5Q96NT1 182 aaPredicted RBP12.19□□□□□ -0.46
CPNE1-218ENST00000439806 KRT23Q9C075 422 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 NBPF3Q9H094 633 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 CNNM2Q9H8M5 875 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 RCOR1Q9UKL0 485 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 NOL7Q9UMY1 257 aaKnown RBP12.19□□□□□ -0.46
CPNE1-218ENST00000439806 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
CPNE1-218ENST00000439806 NEDD4P46934 1319 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 PNPLA7Q6ZV29 1317 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 UBAP1LF5GYI3 381 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 PPFIA3O75145 1194 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 ADCY5O95622 1261 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 METAP2P50579 478 aaKnown RBP eCLIP12.18□□□□□ -0.46
CPNE1-218ENST00000439806 UBE4AQ14139 1066 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 SASS6Q6UVJ0 657 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 CCAR1Q8IX12 1150 aaKnown RBP12.18□□□□□ -0.46
CPNE1-218ENST00000439806 USP28Q96RU2 1077 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 NYXQ9GZU5 481 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 EPB41L4AQ9HCS5 686 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-218ENST00000439806 ZKSCAN5Q9Y2L8 839 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 SLC4A4Q9Y6R1 1079 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 BCL9LQ86UU0 1499 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 COL4A1P02462 1669 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 THSD7AQ9UPZ6 1657 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 CCDC88AQ3V6T2 1871 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 MAST2Q6P0Q8 1798 aa12.18□□□□□ -0.46
CPNE1-218ENST00000439806 MYH6P13533 1939 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 CCDC69A6NI79 296 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 GOLGA8AA7E2F4 631 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 CTAGE5O15320 804 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 KDM4AO75164 1064 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 RPS6KA4O75676 772 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 CYP7A1P22680 504 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 ADD1P35611 737 aaKnown RBP12.17□□□□□ -0.46
CPNE1-218ENST00000439806 PLCB2Q00722 1185 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 CTDSPL2Q05D32 466 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 STK38Q15208 465 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 CAVIN4Q5BKX8 364 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 TMEM67Q5HYA8 995 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 AKNAD1Q5T1N1 836 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 RC3H1Q5TC82 1133 aaKnown RBP12.17□□□□□ -0.46
CPNE1-218ENST00000439806 SYNE3Q6ZMZ3 975 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 MFSD6Q6ZSS7 791 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 BRAPQ7Z569 592 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 CKAP2LQ8IYA6 745 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 LCORLQ8N3X6 602 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 RGS22Q8NE09 1264 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 FAM200AQ8TCP9 573 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 TOMM22Q9NS69 142 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 RAI14Q9P0K7 980 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 MRVI1Q9Y6F6 885 aa12.17□□□□□ -0.46
CPNE1-218ENST00000439806 LY75O60449 1722 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms