RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 HPS5Q9UPZ3 1129 aa7.78□□□□□ -1.16
PNKDP1-201ENST00000435914 MANSC4A6NHS7 340 aaPredicted RBP7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 ZBTB22O15209 634 aa7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 MYO1BO43795 1136 aa7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 PPP1R12BO60237 982 aaPredicted RBP7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 CRKP46108 304 aa7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 INHBEP58166 350 aa7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 HDLBPQ00341 1268 aaKnown RBP7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 PKN2Q16513 984 aaKnown RBP7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 ATG9AQ7Z3C6 839 aa7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 IFNL1Q8IU54 200 aa7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 SLC10A4Q96EP9 437 aa7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 PTPN18Q99952 460 aa7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 MRIQ9BWK5 157 aa7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 VEZTQ9HBM0 779 aa7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 IQSEC3Q9UPP2 1182 aaPredicted RBP7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 MYH13Q9UKX3 1938 aa7.77□□□□□ -1.17
PNKDP1-201ENST00000435914 EYA2O00167 538 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 FKTNO75072 461 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 ALDH1A1P00352 501 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 BCAMP50895 628 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 RBM5P52756 815 aaKnown RBP eCLIP7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 SOX10P56693 466 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 CAP1Q01518 475 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 TNFAIP1Q13829 316 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 METTL24Q5JXM2 366 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 APOBEC3HQ6NTF7 200 aaKnown RBP7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 FBXO46Q6PJ61 603 aaPredicted RBP7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 ANKRD13AQ8IZ07 590 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 TBC1D22AQ8WUA7 517 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 MS4A4AQ96JQ5 239 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 ZDHHC15Q96MV8 337 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 TMEM39BQ9GZU3 492 aa7.76□□□□□ -1.17
PNKDP1-201ENST00000435914 RPAP1Q9BWH6 1393 aaPredicted RBP7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 SLC34A2O95436 690 aa7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 CT47B1P0C2W7 299 aaPredicted RBP7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 IREB2P48200 963 aaKnown RBP7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 PUM3Q15397 648 aaKnown RBP7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 CAVIN4Q5BKX8 364 aa7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 FKBP1CQ5VVH2 108 aa7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 FAM83AQ86UY5 434 aa7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 CNKSR2Q8WXI2 1034 aa7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 SMC4Q9NTJ3 1288 aa7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 FBXO3Q9UK99 471 aa7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 SUGT1Q9Y2Z0 365 aa7.75□□□□□ -1.17
PNKDP1-201ENST00000435914 RBBP6Q7Z6E9 1792 aaKnown RBP7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 TCP10L2B9ZVM9 353 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 CIAO1O76071 339 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 CACNB3P54284 484 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 CHAF1AQ13111 956 aaPredicted RBP7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 CRHR2Q13324 411 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 VGLL4Q14135 290 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 HHIPL2Q6UWX4 724 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 OTOP1Q7RTM1 612 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 BRI3BPQ8WY22 251 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 LPIN2Q92539 896 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 TEKT1Q969V4 418 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 OPTNQ96CV9 577 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 ELP3Q9H9T3 547 aa7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 NOB1Q9ULX3 412 aaKnown RBP7.74□□□□□ -1.17
PNKDP1-201ENST00000435914 SPDYE5A6NIY4 337 aa7.73□□□□□ -1.17
PNKDP1-201ENST00000435914 CCER2I3L3R5 266 aa7.73□□□□□ -1.17
PNKDP1-201ENST00000435914 IFIT1P09914 478 aaKnown RBP7.73□□□□□ -1.17
PNKDP1-201ENST00000435914 TNNI2P48788 182 aa7.73□□□□□ -1.17
PNKDP1-201ENST00000435914 RARSP54136 660 aaKnown RBP7.73□□□□□ -1.17
PNKDP1-201ENST00000435914 MAP3K9P80192 1104 aa7.73□□□□□ -1.17
PNKDP1-201ENST00000435914 VPS37DQ86XT2 251 aa7.73□□□□□ -1.17
PNKDP1-201ENST00000435914 COPRSQ9NQ92 184 aa7.73□□□□□ -1.17
PNKDP1-201ENST00000435914 SNCAIPQ9Y6H5 919 aa7.73□□□□□ -1.17
PNKDP1-201ENST00000435914 MAST3O60307 1309 aa7.73□□□□□ -1.17
PNKDP1-201ENST00000435914 SALL1Q9NSC2 1324 aa7.73□□□□□ -1.17
PNKDP1-201ENST00000435914 KIAA0100Q14667 2235 aaKnown RBP7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 RFX7Q2KHR2 1363 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 ATRNL1Q5VV63 1379 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 UBTFL1P0CB47 393 aaPredicted RBP7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 SLC5A1P13866 664 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 PRDX5P30044 214 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 PHKA1P46020 1223 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 NFIAQ12857 509 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 MTX1Q13505 466 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 DIXDC1Q155Q3 683 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 ATP2B3Q16720 1220 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 INTS3Q68E01 1043 aaKnown RBP7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 FAM43AQ8N2R8 423 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 WDR66Q8TBY9 1149 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 ARHGAP45Q92619 1136 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 MEIS3Q99687 375 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 API5Q9BZZ5 524 aaKnown RBP7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 ZNF112Q9UJU3 913 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 PA2G4Q9UQ80 394 aaKnown RBP7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 DAGLAQ9Y4D2 1042 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 LRRFIP2Q9Y608 721 aaKnown RBP7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 ZSWIM8A7E2V4 1837 aa7.72□□□□□ -1.17
PNKDP1-201ENST00000435914 CCL15-CCL14A0A0B4J2E2 113 aa7.71□□□□□ -1.18
PNKDP1-201ENST00000435914 IRF6O14896 467 aa7.71□□□□□ -1.18
PNKDP1-201ENST00000435914 SEMA3EO15041 775 aa7.71□□□□□ -1.18
PNKDP1-201ENST00000435914 FRAT2O75474 233 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms