RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 LIG1P18858 919 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 PSMA6P60900 246 aaKnown RBP6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 MAP3K11Q16584 847 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 TMEM95Q3KNT9 176 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 GRAMD1BQ3KR37 738 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 CT47A1Q5JQC4 288 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 C6orf118Q5T5N4 469 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 RNF180Q86T96 592 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 NIM1KQ8IY84 436 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 SPICE1Q8N0Z3 855 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 IFT43Q96FT9 208 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 RHOVQ96L33 236 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 PCGF6Q9BYE7 350 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 CAAP1Q9H8G2 361 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 SCINQ9Y6U3 715 aa6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 SETD1BQ9UPS6 1966 aaKnown RBP6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 SOS2Q07890 1332 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P10-201ENST00000434734 NPHP1O15259 732 aa6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 POLR3DP05423 398 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 NEK2P51955 445 aa6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 MAPRE1Q15691 268 aaKnown RBP6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 ACBD5Q5T8D3 534 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 LARP1BQ659C4 914 aaKnown RBP6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 PRPF40BQ6NWY9 871 aaKnown RBP6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 ERAP2Q6P179 960 aa6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 PAF1Q8N7H5 531 aa6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 MYRIPQ8NFW9 859 aa6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 NINJ1Q92982 152 aa6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 SLC4A9Q96Q91 983 aa6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 TNKS2Q9H2K2 1166 aa6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 KCNQ5Q9NR82 932 aa6.75□□□□□ -1.33
HMGB3P10-201ENST00000434734 A6NJY4 79 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 B2RBV5 119 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 H3BM21 787 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 SPINT1O43278 529 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 GREM1O60565 184 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 PDE8AO60658 829 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 TNFRSF21O75509 655 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 GJB6O95452 261 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 PCSK2P16519 638 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 MCCP23508 829 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 ERVK-9P63128 1117 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 PWP1Q13610 501 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 MYBPC2Q14324 1141 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 HLTFQ14527 1009 aaKnown RBP eCLIP6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 CBX2Q14781 532 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 MLC1Q15049 377 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 CCDC85BQ15834 202 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 C11orf91Q3C1V1 193 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 TREML1Q86YW5 311 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 IFNL3Q8IZI9 196 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 IRF7Q92985 503 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 SRCIN1Q9C0H9 1055 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 CDH19Q9H159 772 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 ZHX3Q9H4I2 956 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 AS3MTQ9HBK9 375 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 ARHGEF10LQ9HCE6 1279 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 TLR6Q9Y2C9 796 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 DAAM1Q9Y4D1 1078 aa6.74□□□□□ -1.33
HMGB3P10-201ENST00000434734 ERVH48-1M5A8F1 160 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 EML1O00423 815 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 EPB41L2O43491 1005 aaKnown RBP6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 COL6A1P12109 1028 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 MAN1A1P33908 653 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 SOX5P35711 763 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 SSRP1Q08945 709 aaKnown RBP6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 SIM2Q14190 667 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 CCDC184Q52MB2 194 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 POTEAQ6S8J7 498 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 CACTIN-AS1Q8N1I8 211 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 SYNPOQ8N3V7 929 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 AFAP1L2Q8N4X5 818 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 PHC3Q8NDX5 983 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 C3orf58Q8NDZ4 430 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 ATL2Q8NHH9 583 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 NKD1Q969G9 470 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 NEUROD6Q96NK8 337 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 ZMYM5Q9UJ78 669 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 ANAPC4Q9UJX5 808 aa6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 SUPT16HQ9Y5B9 1047 aaKnown RBP6.73□□□□□ -1.33
HMGB3P10-201ENST00000434734 TTLL8A6PVC2 850 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 GSG1L2A8MUP6 293 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 FBXO24O75426 580 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 F2P00734 622 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 PF4P02776 101 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 LDHCP07864 332 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 GIPRP48546 466 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 NEK3P51956 506 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 EIF6P56537 245 aaKnown RBP6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 INSM1Q01101 510 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 PIN1Q13526 163 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 GRM2Q14416 872 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 GRIN2CQ14957 1233 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 MTFR1Q15390 333 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 AKAP4Q5JQC9 854 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 FAM83BQ5T0W9 1011 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 IL31Q6EBC2 164 aa6.72□□□□□ -1.33
HMGB3P10-201ENST00000434734 KANK3Q6NY19 840 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms