RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 VPS37DQ86XT2 251 aa28.41■■■□□ 2.14
HOMER3-203ENST00000433218 PPP2R3BQ9Y5P8 575 aa28.41■■■□□ 2.14
HOMER3-203ENST00000433218 MKI67P46013 3256 aaKnown RBP28.41■■■□□ 2.14
HOMER3-203ENST00000433218 EYA2O00167 538 aa28.4■■■□□ 2.14
HOMER3-203ENST00000433218 TM4SF4P48230 202 aa28.4■■■□□ 2.14
HOMER3-203ENST00000433218 TEPSINQ96N21 525 aa28.4■■■□□ 2.14
HOMER3-203ENST00000433218 MEIS3Q99687 375 aa28.4■■■□□ 2.14
HOMER3-203ENST00000433218 LRRFIP2Q9Y608 721 aaKnown RBP28.4■■■□□ 2.14
HOMER3-203ENST00000433218 ZSWIM8A7E2V4 1837 aa28.4■■■□□ 2.14
HOMER3-203ENST00000433218 TCP10L2B9ZVM9 353 aa28.39■■■□□ 2.14
HOMER3-203ENST00000433218 PUM3Q15397 648 aaKnown RBP28.39■■■□□ 2.14
HOMER3-203ENST00000433218 ZNF296Q8WUU4 475 aaPredicted RBP28.39■■■□□ 2.14
HOMER3-203ENST00000433218 WNK4Q96J92 1243 aa28.39■■■□□ 2.14
HOMER3-203ENST00000433218 TMEM39BQ9GZU3 492 aa28.39■■■□□ 2.14
HOMER3-203ENST00000433218 PA2G4Q9UQ80 394 aaKnown RBP28.39■■■□□ 2.14
HOMER3-203ENST00000433218 RARSP54136 660 aaKnown RBP28.38■■■□□ 2.13
HOMER3-203ENST00000433218 REM2Q8IYK8 340 aaPredicted RBP28.38■■■□□ 2.13
HOMER3-203ENST00000433218 DOCK2Q92608 1830 aa28.37■■■□□ 2.13
HOMER3-203ENST00000433218 USP2O75604 605 aaPredicted RBP28.37■■■□□ 2.13
HOMER3-203ENST00000433218 UBTFL1P0CB47 393 aaPredicted RBP28.37■■■□□ 2.13
HOMER3-203ENST00000433218 CAVIN4Q5BKX8 364 aa28.36■■■□□ 2.13
HOMER3-203ENST00000433218 IGF2BP3O00425 579 aaKnown RBP eCLIP28.35■■■□□ 2.13
HOMER3-203ENST00000433218 FRAT2O75474 233 aaPredicted RBP28.35■■■□□ 2.13
HOMER3-203ENST00000433218 CNKSR2Q8WXI2 1034 aa28.35■■■□□ 2.13
HOMER3-203ENST00000433218 PDE4DIPQ5VU43 2346 aa28.35■■■□□ 2.13
HOMER3-203ENST00000433218 CTU1Q7Z7A3 348 aaKnown RBP28.35■■■□□ 2.13
HOMER3-203ENST00000433218 KIF16BQ96L93 1317 aa28.34■■■□□ 2.13
HOMER3-203ENST00000433218 PPP1R12BO60237 982 aaPredicted RBP28.34■■■□□ 2.13
HOMER3-203ENST00000433218 CT47B1P0C2W7 299 aaPredicted RBP28.34■■■□□ 2.13
HOMER3-203ENST00000433218 SREBF2Q12772 1141 aa28.34■■■□□ 2.13
HOMER3-203ENST00000433218 GPR25O00155 361 aa28.33■■■□□ 2.13
HOMER3-203ENST00000433218 IFIT1P09914 478 aaKnown RBP28.33■■■□□ 2.13
HOMER3-203ENST00000433218 SOX10P56693 466 aa28.33■■■□□ 2.13
HOMER3-203ENST00000433218 SLC10A4Q96EP9 437 aa28.33■■■□□ 2.13
HOMER3-203ENST00000433218 SLC5A1P13866 664 aa28.32■■■□□ 2.12
HOMER3-203ENST00000433218 SUPT20HL1Q3ZLR7 823 aa28.32■■■□□ 2.12
HOMER3-203ENST00000433218 API5Q9BZZ5 524 aaKnown RBP28.32■■■□□ 2.12
HOMER3-203ENST00000433218 ELP3Q9H9T3 547 aa28.32■■■□□ 2.12
HOMER3-203ENST00000433218 RGS19P49795 217 aa28.31■■■□□ 2.12
HOMER3-203ENST00000433218 TBC1D22AQ8WUA7 517 aa28.31■■■□□ 2.12
HOMER3-203ENST00000433218 LPIN2Q92539 896 aa28.31■■■□□ 2.12
HOMER3-203ENST00000433218 TEKT1Q969V4 418 aa28.31■■■□□ 2.12
HOMER3-203ENST00000433218 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.31■■■□□ 2.12
HOMER3-203ENST00000433218 MYO5AQ9Y4I1 1855 aaKnown RBP28.3■■■□□ 2.12
HOMER3-203ENST00000433218 ADORA1P30542 326 aa28.3■■■□□ 2.12
HOMER3-203ENST00000433218 IREB2P48200 963 aaKnown RBP28.3■■■□□ 2.12
HOMER3-203ENST00000433218 TNFAIP1Q13829 316 aa28.3■■■□□ 2.12
HOMER3-203ENST00000433218 APOBEC3HQ6NTF7 200 aaKnown RBP28.3■■■□□ 2.12
HOMER3-203ENST00000433218 IFNL1Q8IU54 200 aa28.3■■■□□ 2.12
HOMER3-203ENST00000433218 ZBED9Q6R2W3 1325 aa28.3■■■□□ 2.12
HOMER3-203ENST00000433218 ZBTB48P10074 688 aaPredicted RBP28.29■■■□□ 2.12
HOMER3-203ENST00000433218 ATP2B3Q16720 1220 aa28.29■■■□□ 2.12
HOMER3-203ENST00000433218 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.29■■■□□ 2.12
HOMER3-203ENST00000433218 BCAR3O75815 825 aa28.28■■■□□ 2.12
HOMER3-203ENST00000433218 PRDX5P30044 214 aa28.28■■■□□ 2.12
HOMER3-203ENST00000433218 PHKA1P46020 1223 aa28.28■■■□□ 2.12
HOMER3-203ENST00000433218 DIXDC1Q155Q3 683 aa28.28■■■□□ 2.12
HOMER3-203ENST00000433218 ZDHHC15Q96MV8 337 aa28.28■■■□□ 2.12
HOMER3-203ENST00000433218 MANSC4A6NHS7 340 aaPredicted RBP28.27■■■□□ 2.12
HOMER3-203ENST00000433218 CIAO1O76071 339 aa28.27■■■□□ 2.12
HOMER3-203ENST00000433218 VGLL4Q14135 290 aa28.27■■■□□ 2.12
HOMER3-203ENST00000433218 ANKRD13AQ8IZ07 590 aa28.27■■■□□ 2.12
HOMER3-203ENST00000433218 OPTNQ96CV9 577 aa28.27■■■□□ 2.12
HOMER3-203ENST00000433218 PTPN18Q99952 460 aa28.27■■■□□ 2.12
HOMER3-203ENST00000433218 CFHR5Q9BXR6 569 aa28.27■■■□□ 2.12
HOMER3-203ENST00000433218 TRIM27P14373 513 aa28.26■■■□□ 2.12
HOMER3-203ENST00000433218 HDLBPQ00341 1268 aaKnown RBP28.26■■■□□ 2.12
HOMER3-203ENST00000433218 CAP1Q01518 475 aa28.26■■■□□ 2.12
HOMER3-203ENST00000433218 HPS5Q9UPZ3 1129 aa28.26■■■□□ 2.12
HOMER3-203ENST00000433218 MLLT1Q03111 559 aaPredicted RBP28.26■■■□□ 2.11
HOMER3-203ENST00000433218 INTS3Q68E01 1043 aaKnown RBP28.26■■■□□ 2.11
HOMER3-203ENST00000433218 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.26■■■□□ 2.11
HOMER3-203ENST00000433218 DAGLAQ9Y4D2 1042 aa28.25■■■□□ 2.11
HOMER3-203ENST00000433218 PTPRFP10586 1907 aa28.24■■■□□ 2.11
HOMER3-203ENST00000433218 YTHDC1Q96MU7 727 aaKnown RBP28.24■■■□□ 2.11
HOMER3-203ENST00000433218 CDK5RAP2Q96SN8 1893 aa28.24■■■□□ 2.11
HOMER3-203ENST00000433218 NOM1Q5C9Z4 860 aaKnown RBP28.23■■■□□ 2.11
HOMER3-203ENST00000433218 COPRSQ9NQ92 184 aa28.23■■■□□ 2.11
HOMER3-203ENST00000433218 CEP126Q9P2H0 1117 aa28.23■■■□□ 2.11
HOMER3-203ENST00000433218 RPAP1Q9BWH6 1393 aaPredicted RBP28.23■■■□□ 2.11
HOMER3-203ENST00000433218 MAST3O60307 1309 aa28.22■■■□□ 2.11
HOMER3-203ENST00000433218 RBBP6Q7Z6E9 1792 aaKnown RBP28.22■■■□□ 2.11
HOMER3-203ENST00000433218 FKTNO75072 461 aa28.22■■■□□ 2.11
HOMER3-203ENST00000433218 TNNI2P48788 182 aa28.22■■■□□ 2.11
HOMER3-203ENST00000433218 CRHR2Q13324 411 aa28.22■■■□□ 2.11
HOMER3-203ENST00000433218 CLUAP1Q96AJ1 413 aa28.22■■■□□ 2.11
HOMER3-203ENST00000433218 MS4A4AQ96JQ5 239 aa28.22■■■□□ 2.11
HOMER3-203ENST00000433218 SNCAIPQ9Y6H5 919 aa28.22■■■□□ 2.11
HOMER3-203ENST00000433218 PHIPQ8WWQ0 1821 aa28.22■■■□□ 2.11
HOMER3-203ENST00000433218 IL15P40933 162 aaPredicted RBP28.21■■■□□ 2.11
HOMER3-203ENST00000433218 NFIAQ12857 509 aa28.21■■■□□ 2.11
HOMER3-203ENST00000433218 HHIPL2Q6UWX4 724 aa28.21■■■□□ 2.11
HOMER3-203ENST00000433218 WDR66Q8TBY9 1149 aa28.21■■■□□ 2.11
HOMER3-203ENST00000433218 FBXO3Q9UK99 471 aa28.21■■■□□ 2.11
HOMER3-203ENST00000433218 SUGT1Q9Y2Z0 365 aa28.21■■■□□ 2.11
HOMER3-203ENST00000433218 BRI3BPQ8WY22 251 aa28.2■■■□□ 2.11
HOMER3-203ENST00000433218 ARHGAP45Q92619 1136 aa28.2■■■□□ 2.11
HOMER3-203ENST00000433218 FRAT1Q92837 279 aaPredicted RBP28.2■■■□□ 2.11
HOMER3-203ENST00000433218 OTUD5Q96G74 571 aa28.2■■■□□ 2.11
HOMER3-203ENST00000433218 MAST2Q6P0Q8 1798 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms