RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 DZIP1LQ8IYY4 767 aaKnown RBP21.81■■□□□ 1.08
NUP50-208ENST00000430547 WDR66Q8TBY9 1149 aa21.81■■□□□ 1.08
NUP50-208ENST00000430547 TEKT1Q969V4 418 aa21.81■■□□□ 1.08
NUP50-208ENST00000430547 HDLBPQ00341 1268 aaKnown RBP21.8■■□□□ 1.08
NUP50-208ENST00000430547 KIF23Q02241 960 aaPredicted RBP21.8■■□□□ 1.08
NUP50-208ENST00000430547 RASAL3Q86YV0 1011 aa21.8■■□□□ 1.08
NUP50-208ENST00000430547 ITPRIPQ8IWB1 547 aa21.8■■□□□ 1.08
NUP50-208ENST00000430547 ZIC5Q96T25 663 aa21.8■■□□□ 1.08
NUP50-208ENST00000430547 TDRD3Q9H7E2 651 aaKnown RBP21.8■■□□□ 1.08
NUP50-208ENST00000430547 TSKSQ9UJT2 592 aa21.8■■□□□ 1.08
NUP50-208ENST00000430547 SUGT1Q9Y2Z0 365 aa21.8■■□□□ 1.08
NUP50-208ENST00000430547 SUPT20HL1Q3ZLR7 823 aa21.79■■□□□ 1.08
NUP50-208ENST00000430547 SPDYE2Q495Y8 402 aa21.79■■□□□ 1.08
NUP50-208ENST00000430547 ZNF70Q9UC06 446 aaPredicted RBP21.79■■□□□ 1.08
NUP50-208ENST00000430547 ANGEL1Q9UNK9 670 aaKnown RBP21.79■■□□□ 1.08
NUP50-208ENST00000430547 AKAP2Q9Y2D5 859 aa21.79■■□□□ 1.08
NUP50-208ENST00000430547 PPP1R12BO60237 982 aaPredicted RBP21.78■■□□□ 1.08
NUP50-208ENST00000430547 TNNI2P48788 182 aa21.78■■□□□ 1.08
NUP50-208ENST00000430547 GRIK5Q16478 980 aa21.78■■□□□ 1.08
NUP50-208ENST00000430547 AOX1Q06278 1338 aa21.78■■□□□ 1.08
NUP50-208ENST00000430547 RASA3Q14644 834 aa21.77■■□□□ 1.08
NUP50-208ENST00000430547 REM2Q8IYK8 340 aaPredicted RBP21.77■■□□□ 1.08
NUP50-208ENST00000430547 TMOD2Q9NZR1 351 aa21.77■■□□□ 1.08
NUP50-208ENST00000430547 DENND2AQ9ULE3 1009 aa21.77■■□□□ 1.08
NUP50-208ENST00000430547 CASP8AP2Q9UKL3 1982 aa21.76■■□□□ 1.07
NUP50-208ENST00000430547 SEMA3EO15041 775 aa21.76■■□□□ 1.07
NUP50-208ENST00000430547 TFCP2Q12800 502 aa21.76■■□□□ 1.07
NUP50-208ENST00000430547 G3BP1Q13283 466 aaKnown RBP eCLIP21.76■■□□□ 1.07
NUP50-208ENST00000430547 PNMA6EA0A0J9YXQ4 647 aa21.75■■□□□ 1.07
NUP50-208ENST00000430547 A0A1B0GUL7 405 aa21.75■■□□□ 1.07
NUP50-208ENST00000430547 TCP10L2B9ZVM9 353 aa21.75■■□□□ 1.07
NUP50-208ENST00000430547 PHKA1P46020 1223 aa21.75■■□□□ 1.07
NUP50-208ENST00000430547 ZDHHC15Q96MV8 337 aa21.75■■□□□ 1.07
NUP50-208ENST00000430547 MRIQ9BWK5 157 aa21.75■■□□□ 1.07
NUP50-208ENST00000430547 SSC5DA1L4H1 1573 aa21.74■■□□□ 1.07
NUP50-208ENST00000430547 ADORA1P30542 326 aa21.74■■□□□ 1.07
NUP50-208ENST00000430547 TIMM10P62072 90 aa21.74■■□□□ 1.07
NUP50-208ENST00000430547 MVPQ14764 893 aaKnown RBP21.74■■□□□ 1.07
NUP50-208ENST00000430547 NBPF12Q5TAG4 269 aaPredicted RBP21.74■■□□□ 1.07
NUP50-208ENST00000430547 CCDC102BQ68D86 513 aa21.74■■□□□ 1.07
NUP50-208ENST00000430547 NEUROD6Q96NK8 337 aa21.74■■□□□ 1.07
NUP50-208ENST00000430547 SAGE1Q9NXZ1 904 aa21.74■■□□□ 1.07
NUP50-208ENST00000430547 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.74■■□□□ 1.07
NUP50-208ENST00000430547 MYH2Q9UKX2 1941 aa21.74■■□□□ 1.07
NUP50-208ENST00000430547 AK9Q5TCS8 1911 aa21.73■■□□□ 1.07
NUP50-208ENST00000430547 LDHBP07195 334 aaKnown RBP21.73■■□□□ 1.07
NUP50-208ENST00000430547 MS4A1P11836 297 aa21.73■■□□□ 1.07
NUP50-208ENST00000430547 RLBP1P12271 317 aa21.73■■□□□ 1.07
NUP50-208ENST00000430547 IREB2P48200 963 aaKnown RBP21.73■■□□□ 1.07
NUP50-208ENST00000430547 OS9Q13438 667 aaPredicted RBP21.73■■□□□ 1.07
NUP50-208ENST00000430547 GORABQ5T7V8 394 aa21.73■■□□□ 1.07
NUP50-208ENST00000430547 HHIPL2Q6UWX4 724 aa21.73■■□□□ 1.07
NUP50-208ENST00000430547 ZGPATQ8N5A5 531 aaKnown RBP21.73■■□□□ 1.07
NUP50-208ENST00000430547 CSRNP1Q96S65 589 aa21.73■■□□□ 1.07
NUP50-208ENST00000430547 C1orf115Q9H7X2 142 aa21.73■■□□□ 1.07
NUP50-208ENST00000430547 FZD1Q9UP38 647 aa21.73■■□□□ 1.07
NUP50-208ENST00000430547 OTOFQ9HC10 1997 aa21.73■■□□□ 1.07
NUP50-208ENST00000430547 CAPN15O75808 1086 aa21.72■■□□□ 1.07
NUP50-208ENST00000430547 MKRN3Q13064 507 aaKnown RBP21.72■■□□□ 1.07
NUP50-208ENST00000430547 MAP3K11Q16584 847 aa21.72■■□□□ 1.07
NUP50-208ENST00000430547 LDLRAD1Q5T700 205 aa21.72■■□□□ 1.07
NUP50-208ENST00000430547 XAGE2Q96GT9 111 aa21.72■■□□□ 1.07
NUP50-208ENST00000430547 TRPA1O75762 1119 aa21.71■■□□□ 1.07
NUP50-208ENST00000430547 PRDX5P30044 214 aa21.71■■□□□ 1.07
NUP50-208ENST00000430547 SLC10A4Q96EP9 437 aa21.71■■□□□ 1.07
NUP50-208ENST00000430547 RNF186Q9NXI6 227 aa21.71■■□□□ 1.07
NUP50-208ENST00000430547 SALL1Q9NSC2 1324 aa21.71■■□□□ 1.07
NUP50-208ENST00000430547 UNCXA6NJT0 531 aa21.7■■□□□ 1.06
NUP50-208ENST00000430547 CACNB3P54284 484 aa21.7■■□□□ 1.06
NUP50-208ENST00000430547 ATP8B2P98198 1209 aa21.7■■□□□ 1.06
NUP50-208ENST00000430547 SREBF2Q12772 1141 aa21.7■■□□□ 1.06
NUP50-208ENST00000430547 TMEM39BQ9GZU3 492 aa21.7■■□□□ 1.06
NUP50-208ENST00000430547 ZBTB7BO15156 539 aaPredicted RBP21.69■■□□□ 1.06
NUP50-208ENST00000430547 RASGRF1Q13972 1273 aa21.69■■□□□ 1.06
NUP50-208ENST00000430547 POLA2Q14181 598 aa21.69■■□□□ 1.06
NUP50-208ENST00000430547 APOBEC3HQ6NTF7 200 aaKnown RBP21.69■■□□□ 1.06
NUP50-208ENST00000430547 PANK1Q8TE04 598 aa21.69■■□□□ 1.06
NUP50-208ENST00000430547 SSH3Q8TE77 659 aa21.69■■□□□ 1.06
NUP50-208ENST00000430547 ZBTB22O15209 634 aa21.68■■□□□ 1.06
NUP50-208ENST00000430547 SURF6O75683 361 aaKnown RBP21.68■■□□□ 1.06
NUP50-208ENST00000430547 DIXDC1Q155Q3 683 aa21.68■■□□□ 1.06
NUP50-208ENST00000430547 FKBP1CQ5VVH2 108 aa21.68■■□□□ 1.06
NUP50-208ENST00000430547 SPRYD7Q5W111 196 aa21.68■■□□□ 1.06
NUP50-208ENST00000430547 DZIP1Q86YF9 867 aaKnown RBP21.68■■□□□ 1.06
NUP50-208ENST00000430547 ANKRD13AQ8IZ07 590 aa21.68■■□□□ 1.06
NUP50-208ENST00000430547 ABCF2Q9UG63 623 aa21.68■■□□□ 1.06
NUP50-208ENST00000430547 DAGLAQ9Y4D2 1042 aa21.68■■□□□ 1.06
NUP50-208ENST00000430547 PDS5AQ29RF7 1337 aaKnown RBP21.68■■□□□ 1.06
NUP50-208ENST00000430547 LAMB1P07942 1786 aa21.68■■□□□ 1.06
NUP50-208ENST00000430547 USP2O75604 605 aaPredicted RBP21.67■■□□□ 1.06
NUP50-208ENST00000430547 SPTY2D1Q68D10 685 aaPredicted RBP21.67■■□□□ 1.06
NUP50-208ENST00000430547 FAM83AQ86UY5 434 aa21.67■■□□□ 1.06
NUP50-208ENST00000430547 HOOK2Q96ED9 719 aa21.67■■□□□ 1.06
NUP50-208ENST00000430547 TEPSINQ96N21 525 aa21.67■■□□□ 1.06
NUP50-208ENST00000430547 ZBTB48P10074 688 aaPredicted RBP21.66■■□□□ 1.06
NUP50-208ENST00000430547 SLF2Q8IX21 1173 aa21.66■■□□□ 1.06
NUP50-208ENST00000430547 CLMNQ96JQ2 1002 aa21.66■■□□□ 1.06
NUP50-208ENST00000430547 RCAN3Q9UKA8 241 aa21.66■■□□□ 1.06
NUP50-208ENST00000430547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.66■■□□□ 1.06
NUP50-208ENST00000430547 CDAN1Q8IWY9 1227 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms