RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 RBM27Q9P2N5 1060 aaKnown RBP18.61■□□□□ 0.57
TVP23C-203ENST00000428082 RPAP1Q9BWH6 1393 aaPredicted RBP18.6■□□□□ 0.57
TVP23C-203ENST00000428082 C6orf229H3BNL8 230 aa18.6■□□□□ 0.57
TVP23C-203ENST00000428082 ZSCAN30Q86W11 494 aa18.6■□□□□ 0.57
TVP23C-203ENST00000428082 EDC3Q96F86 508 aaKnown RBP18.6■□□□□ 0.57
TVP23C-203ENST00000428082 DNAJC2Q99543 621 aaKnown RBP18.6■□□□□ 0.57
TVP23C-203ENST00000428082 RFX7Q2KHR2 1363 aa18.6■□□□□ 0.57
TVP23C-203ENST00000428082 SNED1Q8TER0 1413 aa18.6■□□□□ 0.57
TVP23C-203ENST00000428082 SYCE3A1L190 88 aa18.59■□□□□ 0.57
TVP23C-203ENST00000428082 ARID4AP29374 1257 aaPredicted RBP18.59■□□□□ 0.57
TVP23C-203ENST00000428082 MCAMP43121 646 aa18.59■□□□□ 0.57
TVP23C-203ENST00000428082 PTH1RQ03431 593 aa18.59■□□□□ 0.57
TVP23C-203ENST00000428082 CAVIN4Q5BKX8 364 aa18.59■□□□□ 0.57
TVP23C-203ENST00000428082 PI16Q6UXB8 463 aa18.59■□□□□ 0.57
TVP23C-203ENST00000428082 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.59■□□□□ 0.57
TVP23C-203ENST00000428082 ZNF512BQ96KM6 892 aaPredicted RBP18.59■□□□□ 0.57
TVP23C-203ENST00000428082 HAUS7Q99871 368 aa18.59■□□□□ 0.57
TVP23C-203ENST00000428082 FHDC1Q9C0D6 1143 aaPredicted RBP18.59■□□□□ 0.57
TVP23C-203ENST00000428082 HMG20BQ9P0W2 317 aa18.59■□□□□ 0.57
TVP23C-203ENST00000428082 DALRD3Q5D0E6 543 aaKnown RBP18.59■□□□□ 0.57
TVP23C-203ENST00000428082 FBXO33Q7Z6M2 555 aa18.59■□□□□ 0.57
TVP23C-203ENST00000428082 FSD1Q9BTV5 496 aa18.59■□□□□ 0.57
TVP23C-203ENST00000428082 ALDH8A1Q9H2A2 487 aaPredicted RBP18.59■□□□□ 0.57
TVP23C-203ENST00000428082 IQSEC3Q9UPP2 1182 aaPredicted RBP18.59■□□□□ 0.57
TVP23C-203ENST00000428082 RBM8AQ9Y5S9 174 aaKnown RBP18.59■□□□□ 0.57
TVP23C-203ENST00000428082 SRCAPQ6ZRS2 3230 aa18.58■□□□□ 0.57
TVP23C-203ENST00000428082 UQCRFS1P1P0C7P4 283 aa18.58■□□□□ 0.56
TVP23C-203ENST00000428082 NMIQ13287 307 aaPredicted RBP18.58■□□□□ 0.56
TVP23C-203ENST00000428082 CREB3L3Q68CJ9 461 aa18.58■□□□□ 0.56
TVP23C-203ENST00000428082 C15orf52Q6ZUT6 534 aaKnown RBP18.58■□□□□ 0.56
TVP23C-203ENST00000428082 USP48Q86UV5 1035 aa18.58■□□□□ 0.56
TVP23C-203ENST00000428082 VPS37DQ86XT2 251 aa18.58■□□□□ 0.56
TVP23C-203ENST00000428082 PDLIM2Q96JY6 352 aa18.58■□□□□ 0.56
TVP23C-203ENST00000428082 TSPY26PQ9H489 355 aa18.58■□□□□ 0.56
TVP23C-203ENST00000428082 MSNP26038 577 aaKnown RBP18.57■□□□□ 0.56
TVP23C-203ENST00000428082 HIBADHP31937 336 aaKnown RBP18.57■□□□□ 0.56
TVP23C-203ENST00000428082 RASGRF1Q13972 1273 aa18.57■□□□□ 0.56
TVP23C-203ENST00000428082 CC2D2BQ6DHV5 1058 aa18.57■□□□□ 0.56
TVP23C-203ENST00000428082 TICAM2Q86XR7 235 aa18.57■□□□□ 0.56
TVP23C-203ENST00000428082 MED23Q9ULK4 1368 aa18.57■□□□□ 0.56
TVP23C-203ENST00000428082 MYH13Q9UKX3 1938 aa18.57■□□□□ 0.56
TVP23C-203ENST00000428082 F13A1P00488 732 aa18.57■□□□□ 0.56
TVP23C-203ENST00000428082 SYT1P21579 422 aa18.57■□□□□ 0.56
TVP23C-203ENST00000428082 ZAP70P43403 619 aa18.57■□□□□ 0.56
TVP23C-203ENST00000428082 FKBP4Q02790 459 aaKnown RBP eCLIP18.57■□□□□ 0.56
TVP23C-203ENST00000428082 FAM184AQ8NB25 1140 aa18.57■□□□□ 0.56
TVP23C-203ENST00000428082 UBE2HP62256 183 aa18.56■□□□□ 0.56
TVP23C-203ENST00000428082 KRT32Q14532 448 aa18.56■□□□□ 0.56
TVP23C-203ENST00000428082 CCDC93Q567U6 631 aa18.56■□□□□ 0.56
TVP23C-203ENST00000428082 PAG1Q9NWQ8 432 aa18.56■□□□□ 0.56
TVP23C-203ENST00000428082 GOLIM4O00461 696 aa18.55■□□□□ 0.56
TVP23C-203ENST00000428082 RIMBP2O15034 1052 aa18.55■□□□□ 0.56
TVP23C-203ENST00000428082 PDCP20941 246 aa18.55■□□□□ 0.56
TVP23C-203ENST00000428082 TSGA10IPQ3SY00 556 aa18.55■□□□□ 0.56
TVP23C-203ENST00000428082 RTFDC1Q9BY42 306 aaPredicted RBP18.55■□□□□ 0.56
TVP23C-203ENST00000428082 GNL3LQ9NVN8 582 aaKnown RBP18.55■□□□□ 0.56
TVP23C-203ENST00000428082 BCS1LQ9Y276 419 aa18.55■□□□□ 0.56
TVP23C-203ENST00000428082 SLC27A2O14975 620 aa18.55■□□□□ 0.56
TVP23C-203ENST00000428082 CCDC183Q5T5S1 534 aa18.55■□□□□ 0.56
TVP23C-203ENST00000428082 SPATA5Q8NB90 893 aa18.55■□□□□ 0.56
TVP23C-203ENST00000428082 COL1A1P02452 1464 aaPredicted RBP18.54■□□□□ 0.56
TVP23C-203ENST00000428082 MYO5AQ9Y4I1 1855 aaKnown RBP18.54■□□□□ 0.56
TVP23C-203ENST00000428082 GJB2P29033 226 aa18.54■□□□□ 0.56
TVP23C-203ENST00000428082 WASHC4Q2M389 1173 aa18.54■□□□□ 0.56
TVP23C-203ENST00000428082 BLOC1S2Q6QNY1 142 aa18.54■□□□□ 0.56
TVP23C-203ENST00000428082 ZNF804AQ7Z570 1209 aa18.54■□□□□ 0.56
TVP23C-203ENST00000428082 FAM227BQ96M60 508 aa18.54■□□□□ 0.56
TVP23C-203ENST00000428082 SYT17Q9BSW7 474 aa18.54■□□□□ 0.56
TVP23C-203ENST00000428082 MCM5P33992 734 aa18.53■□□□□ 0.56
TVP23C-203ENST00000428082 UVSSAQ2YD98 709 aa18.53■□□□□ 0.56
TVP23C-203ENST00000428082 ADCK5Q3MIX3 580 aa18.53■□□□□ 0.56
TVP23C-203ENST00000428082 CCDC83Q8IWF9 413 aa18.53■□□□□ 0.56
TVP23C-203ENST00000428082 RTKN2Q8IZC4 609 aa18.53■□□□□ 0.56
TVP23C-203ENST00000428082 CHAMP1Q96JM3 812 aa18.53■□□□□ 0.56
TVP23C-203ENST00000428082 ZC3H12CQ9C0D7 883 aaKnown RBP18.53■□□□□ 0.56
TVP23C-203ENST00000428082 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.53■□□□□ 0.56
TVP23C-203ENST00000428082 ARFGEF1Q9Y6D6 1849 aa18.53■□□□□ 0.56
TVP23C-203ENST00000428082 GRIPAP1Q4V328 841 aa18.53■□□□□ 0.56
TVP23C-203ENST00000428082 SOGA3Q5TF21 947 aa18.53■□□□□ 0.56
TVP23C-203ENST00000428082 NAP1L5Q96NT1 182 aaPredicted RBP18.53■□□□□ 0.56
TVP23C-203ENST00000428082 EYA3Q99504 573 aa18.53■□□□□ 0.56
TVP23C-203ENST00000428082 CHD4Q14839 1912 aa18.52■□□□□ 0.56
TVP23C-203ENST00000428082 FER1L6Q2WGJ9 1857 aa18.52■□□□□ 0.56
TVP23C-203ENST00000428082 TDRD7Q8NHU6 1098 aaKnown RBP18.52■□□□□ 0.56
TVP23C-203ENST00000428082 CD209Q9NNX6 404 aa18.52■□□□□ 0.56
TVP23C-203ENST00000428082 CCDC39Q9UFE4 941 aa18.52■□□□□ 0.56
TVP23C-203ENST00000428082 KBTBD3Q8NAB2 608 aa18.51■□□□□ 0.55
TVP23C-203ENST00000428082 PSMD1Q99460 953 aa18.51■□□□□ 0.55
TVP23C-203ENST00000428082 DENND2AQ9ULE3 1009 aa18.51■□□□□ 0.55
TVP23C-203ENST00000428082 A0A0D9SFI3 127 aa18.51■□□□□ 0.55
TVP23C-203ENST00000428082 SEMA3EO15041 775 aa18.51■□□□□ 0.55
TVP23C-203ENST00000428082 DOK7Q18PE1 504 aa18.51■□□□□ 0.55
TVP23C-203ENST00000428082 PIH1D3Q9NQM4 214 aaKnown RBP18.51■□□□□ 0.55
TVP23C-203ENST00000428082 NOL7Q9UMY1 257 aaKnown RBP18.51■□□□□ 0.55
TVP23C-203ENST00000428082 GADD45BO75293 160 aaPredicted RBP18.5■□□□□ 0.55
TVP23C-203ENST00000428082 IL1R1P14778 569 aa18.5■□□□□ 0.55
TVP23C-203ENST00000428082 CPA1P15085 419 aa18.5■□□□□ 0.55
TVP23C-203ENST00000428082 RPS6KB1P23443 525 aa18.5■□□□□ 0.55
TVP23C-203ENST00000428082 AOC3Q16853 763 aa18.5■□□□□ 0.55
TVP23C-203ENST00000428082 SUPT20HQ8NEM7 779 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms