RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 TDRD3Q9H7E2 651 aaKnown RBP22.23■■□□□ 1.15
GPC1-203ENST00000425056 MANSC4A6NHS7 340 aaPredicted RBP22.22■■□□□ 1.15
GPC1-203ENST00000425056 GPR25O00155 361 aa22.22■■□□□ 1.15
GPC1-203ENST00000425056 IREB2P48200 963 aaKnown RBP22.22■■□□□ 1.15
GPC1-203ENST00000425056 HDLBPQ00341 1268 aaKnown RBP22.22■■□□□ 1.15
GPC1-203ENST00000425056 CHAF1AQ13111 956 aaPredicted RBP22.22■■□□□ 1.15
GPC1-203ENST00000425056 GRIK5Q16478 980 aa22.22■■□□□ 1.15
GPC1-203ENST00000425056 EYA2O00167 538 aa22.21■■□□□ 1.15
GPC1-203ENST00000425056 USP2O75604 605 aaPredicted RBP22.21■■□□□ 1.15
GPC1-203ENST00000425056 IFIT1P09914 478 aaKnown RBP22.21■■□□□ 1.15
GPC1-203ENST00000425056 CCER2I3L3R5 266 aa22.2■■□□□ 1.14
GPC1-203ENST00000425056 FRAT2O75474 233 aaPredicted RBP22.2■■□□□ 1.14
GPC1-203ENST00000425056 ALDH1A1P00352 501 aa22.2■■□□□ 1.14
GPC1-203ENST00000425056 BCAMP50895 628 aa22.2■■□□□ 1.14
GPC1-203ENST00000425056 INHBEP58166 350 aa22.2■■□□□ 1.14
GPC1-203ENST00000425056 PKN2Q16513 984 aaKnown RBP22.2■■□□□ 1.14
GPC1-203ENST00000425056 ANKRD13AQ8IZ07 590 aa22.2■■□□□ 1.14
GPC1-203ENST00000425056 TEPSINQ96N21 525 aa22.2■■□□□ 1.14
GPC1-203ENST00000425056 UBTFL1P0CB47 393 aaPredicted RBP22.19■■□□□ 1.14
GPC1-203ENST00000425056 IFNL1Q8IU54 200 aa22.19■■□□□ 1.14
GPC1-203ENST00000425056 SUGT1Q9Y2Z0 365 aa22.19■■□□□ 1.14
GPC1-203ENST00000425056 MAST3O60307 1309 aa22.18■■□□□ 1.14
GPC1-203ENST00000425056 ATG9AQ7Z3C6 839 aa22.18■■□□□ 1.14
GPC1-203ENST00000425056 CDAN1Q8IWY9 1227 aa22.18■■□□□ 1.14
GPC1-203ENST00000425056 TEKT1Q969V4 418 aa22.18■■□□□ 1.14
GPC1-203ENST00000425056 R3HDMLQ9H3Y0 253 aa22.18■■□□□ 1.14
GPC1-203ENST00000425056 FBXO3Q9UK99 471 aa22.18■■□□□ 1.14
GPC1-203ENST00000425056 NOB1Q9ULX3 412 aaKnown RBP22.18■■□□□ 1.14
GPC1-203ENST00000425056 TCP10L2B9ZVM9 353 aa22.17■■□□□ 1.14
GPC1-203ENST00000425056 SLC5A1P13866 664 aa22.17■■□□□ 1.14
GPC1-203ENST00000425056 GJA5P36382 358 aa22.17■■□□□ 1.14
GPC1-203ENST00000425056 TNNI2P48788 182 aa22.17■■□□□ 1.14
GPC1-203ENST00000425056 LPIN2Q92539 896 aa22.17■■□□□ 1.14
GPC1-203ENST00000425056 ZDHHC15Q96MV8 337 aa22.17■■□□□ 1.14
GPC1-203ENST00000425056 MRIQ9BWK5 157 aa22.17■■□□□ 1.14
GPC1-203ENST00000425056 API5Q9BZZ5 524 aaKnown RBP22.17■■□□□ 1.14
GPC1-203ENST00000425056 TMEM39BQ9GZU3 492 aa22.17■■□□□ 1.14
GPC1-203ENST00000425056 TNRC18O15417 2968 aaPredicted RBP22.16■■□□□ 1.14
GPC1-203ENST00000425056 IGF2BP3O00425 579 aaKnown RBP eCLIP22.16■■□□□ 1.14
GPC1-203ENST00000425056 FKTNO75072 461 aa22.16■■□□□ 1.14
GPC1-203ENST00000425056 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.16■■□□□ 1.14
GPC1-203ENST00000425056 HPS5Q9UPZ3 1129 aa22.16■■□□□ 1.14
GPC1-203ENST00000425056 CIAO1O76071 339 aa22.15■■□□□ 1.14
GPC1-203ENST00000425056 SOX10P56693 466 aa22.14■■□□□ 1.13
GPC1-203ENST00000425056 HTTP42858 3142 aa22.13■■□□□ 1.13
GPC1-203ENST00000425056 RPAP1Q9BWH6 1393 aaPredicted RBP22.13■■□□□ 1.13
GPC1-203ENST00000425056 RARSP54136 660 aaKnown RBP22.13■■□□□ 1.13
GPC1-203ENST00000425056 FKBP1CQ5VVH2 108 aa22.13■■□□□ 1.13
GPC1-203ENST00000425056 APOBEC3HQ6NTF7 200 aaKnown RBP22.13■■□□□ 1.13
GPC1-203ENST00000425056 FBXO46Q6PJ61 603 aaPredicted RBP22.13■■□□□ 1.13
GPC1-203ENST00000425056 HHIPL2Q6UWX4 724 aa22.13■■□□□ 1.13
GPC1-203ENST00000425056 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.13■■□□□ 1.13
GPC1-203ENST00000425056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.13■■□□□ 1.13
GPC1-203ENST00000425056 WDR66Q8TBY9 1149 aa22.13■■□□□ 1.13
GPC1-203ENST00000425056 OPTNQ96CV9 577 aa22.13■■□□□ 1.13
GPC1-203ENST00000425056 SIL1Q9H173 461 aa22.13■■□□□ 1.13
GPC1-203ENST00000425056 ELP3Q9H9T3 547 aa22.13■■□□□ 1.13
GPC1-203ENST00000425056 TMOD2Q9NZR1 351 aa22.13■■□□□ 1.13
GPC1-203ENST00000425056 HDAC5Q9UQL6 1122 aa22.13■■□□□ 1.13
GPC1-203ENST00000425056 LRRFIP2Q9Y608 721 aaKnown RBP22.13■■□□□ 1.13
GPC1-203ENST00000425056 TESPA1A2RU30 521 aaPredicted RBP22.12■■□□□ 1.13
GPC1-203ENST00000425056 CACNB3P54284 484 aa22.12■■□□□ 1.13
GPC1-203ENST00000425056 ATP2B3Q16720 1220 aa22.12■■□□□ 1.13
GPC1-203ENST00000425056 FAM83AQ86UY5 434 aa22.12■■□□□ 1.13
GPC1-203ENST00000425056 VGLL4Q14135 290 aa22.11■■□□□ 1.13
GPC1-203ENST00000425056 OTUD7BQ6GQQ9 843 aa22.11■■□□□ 1.13
GPC1-203ENST00000425056 MEIS3Q99687 375 aa22.11■■□□□ 1.13
GPC1-203ENST00000425056 CEP126Q9P2H0 1117 aa22.11■■□□□ 1.13
GPC1-203ENST00000425056 IL15P40933 162 aaPredicted RBP22.1■■□□□ 1.13
GPC1-203ENST00000425056 MAP3K9P80192 1104 aa22.1■■□□□ 1.13
GPC1-203ENST00000425056 ARHGAP45Q92619 1136 aa22.1■■□□□ 1.13
GPC1-203ENST00000425056 MS4A4AQ96JQ5 239 aa22.1■■□□□ 1.13
GPC1-203ENST00000425056 PTPN18Q99952 460 aa22.1■■□□□ 1.13
GPC1-203ENST00000425056 CRHR2Q13324 411 aa22.09■■□□□ 1.13
GPC1-203ENST00000425056 INTS3Q68E01 1043 aaKnown RBP22.09■■□□□ 1.13
GPC1-203ENST00000425056 COPRSQ9NQ92 184 aa22.09■■□□□ 1.13
GPC1-203ENST00000425056 PA2G4Q9UQ80 394 aaKnown RBP22.09■■□□□ 1.13
GPC1-203ENST00000425056 CSADQ9Y600 493 aa22.09■■□□□ 1.13
GPC1-203ENST00000425056 ZBTB22O15209 634 aa22.08■■□□□ 1.13
GPC1-203ENST00000425056 CNKSR2Q8WXI2 1034 aa22.08■■□□□ 1.13
GPC1-203ENST00000425056 HOOK2Q96ED9 719 aa22.08■■□□□ 1.13
GPC1-203ENST00000425056 SALL1Q9NSC2 1324 aa22.07■■□□□ 1.12
GPC1-203ENST00000425056 PDE4DIPQ5VU43 2346 aa22.07■■□□□ 1.12
GPC1-203ENST00000425056 SEMA3EO15041 775 aa22.07■■□□□ 1.12
GPC1-203ENST00000425056 PRDX5P30044 214 aa22.07■■□□□ 1.12
GPC1-203ENST00000425056 GNL3LQ9NVN8 582 aaKnown RBP22.07■■□□□ 1.12
GPC1-203ENST00000425056 DAGLAQ9Y4D2 1042 aa22.07■■□□□ 1.12
GPC1-203ENST00000425056 SPDYE5A6NIY4 337 aa22.06■■□□□ 1.12
GPC1-203ENST00000425056 PHKA1P46020 1223 aa22.06■■□□□ 1.12
GPC1-203ENST00000425056 OTOP1Q7RTM1 612 aa22.06■■□□□ 1.12
GPC1-203ENST00000425056 BRI3BPQ8WY22 251 aa22.06■■□□□ 1.12
GPC1-203ENST00000425056 SNCAIPQ9Y6H5 919 aa22.06■■□□□ 1.12
GPC1-203ENST00000425056 GNAI3P08754 354 aa22.05■■□□□ 1.12
GPC1-203ENST00000425056 GTF2A2P52657 109 aa22.05■■□□□ 1.12
GPC1-203ENST00000425056 MTX1Q13505 466 aa22.05■■□□□ 1.12
GPC1-203ENST00000425056 DIXDC1Q155Q3 683 aa22.05■■□□□ 1.12
GPC1-203ENST00000425056 OTUD5Q96G74 571 aa22.05■■□□□ 1.12
GPC1-203ENST00000425056 ERO1AQ96HE7 468 aa22.05■■□□□ 1.12
GPC1-203ENST00000425056 WRNIP1Q96S55 665 aa22.05■■□□□ 1.12
GPC1-203ENST00000425056 DENND2AQ9ULE3 1009 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms