RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 GPR108Q9NPR9 543 aa14.33□□□□□ -0.12
NCDN-204ENST00000423723 JAG2Q9Y219 1238 aa14.33□□□□□ -0.12
NCDN-204ENST00000423723 AKAP2Q9Y2D5 859 aa14.33□□□□□ -0.12
NCDN-204ENST00000423723 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.33□□□□□ -0.12
NCDN-204ENST00000423723 AOX1Q06278 1338 aa14.33□□□□□ -0.12
NCDN-204ENST00000423723 PDS5AQ29RF7 1337 aaKnown RBP14.33□□□□□ -0.12
NCDN-204ENST00000423723 FOXN1O15353 648 aa14.32□□□□□ -0.12
NCDN-204ENST00000423723 CRKP46108 304 aa14.32□□□□□ -0.12
NCDN-204ENST00000423723 TIMM10P62072 90 aa14.32□□□□□ -0.12
NCDN-204ENST00000423723 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
NCDN-204ENST00000423723 LDLRAD1Q5T700 205 aa14.32□□□□□ -0.12
NCDN-204ENST00000423723 FKBP1CQ5VVH2 108 aa14.32□□□□□ -0.12
NCDN-204ENST00000423723 FTSJ3Q8IY81 847 aaKnown RBP14.32□□□□□ -0.12
NCDN-204ENST00000423723 ZDHHC15Q96MV8 337 aa14.32□□□□□ -0.12
NCDN-204ENST00000423723 ZNF408Q9H9D4 720 aa14.32□□□□□ -0.12
NCDN-204ENST00000423723 PRDM10Q9NQV6 1147 aa14.32□□□□□ -0.12
NCDN-204ENST00000423723 IQSEC3Q9UPP2 1182 aaPredicted RBP14.32□□□□□ -0.12
NCDN-204ENST00000423723 F8W031 263 aaPredicted RBP14.31□□□□□ -0.12
NCDN-204ENST00000423723 SLC10A3P09131 477 aa14.31□□□□□ -0.12
NCDN-204ENST00000423723 PHKA1P46020 1223 aa14.31□□□□□ -0.12
NCDN-204ENST00000423723 TFCP2Q12800 502 aa14.31□□□□□ -0.12
NCDN-204ENST00000423723 CCDC102BQ68D86 513 aa14.31□□□□□ -0.12
NCDN-204ENST00000423723 APOBEC3HQ6NTF7 200 aaKnown RBP14.31□□□□□ -0.12
NCDN-204ENST00000423723 GNL3LQ9NVN8 582 aaKnown RBP14.31□□□□□ -0.12
NCDN-204ENST00000423723 DENND2AQ9ULE3 1009 aa14.31□□□□□ -0.12
NCDN-204ENST00000423723 A0A1B0GUL7 405 aa14.3□□□□□ -0.12
NCDN-204ENST00000423723 MYO1BO43795 1136 aa14.3□□□□□ -0.12
NCDN-204ENST00000423723 CTCFP49711 727 aaPredicted RBP14.3□□□□□ -0.12
NCDN-204ENST00000423723 PRAMEF18Q5VWM3 479 aa14.3□□□□□ -0.12
NCDN-204ENST00000423723 TEPSINQ96N21 525 aa14.3□□□□□ -0.12
NCDN-204ENST00000423723 ZIC5Q96T25 663 aa14.3□□□□□ -0.12
NCDN-204ENST00000423723 ZBTB40Q9NUA8 1239 aa14.3□□□□□ -0.12
NCDN-204ENST00000423723 ZNF70Q9UC06 446 aaPredicted RBP14.3□□□□□ -0.12
NCDN-204ENST00000423723 SCAF8Q9UPN6 1271 aaKnown RBP14.3□□□□□ -0.12
NCDN-204ENST00000423723 PAPPA2Q9BXP8 1791 aa14.29□□□□□ -0.12
NCDN-204ENST00000423723 CA12O43570 354 aa14.29□□□□□ -0.12
NCDN-204ENST00000423723 AOC2O75106 756 aa14.29□□□□□ -0.12
NCDN-204ENST00000423723 FRAT2O75474 233 aaPredicted RBP14.29□□□□□ -0.12
NCDN-204ENST00000423723 ADORA1P30542 326 aa14.29□□□□□ -0.12
NCDN-204ENST00000423723 CHAF1AQ13111 956 aaPredicted RBP14.29□□□□□ -0.12
NCDN-204ENST00000423723 G3BP1Q13283 466 aaKnown RBP eCLIP14.29□□□□□ -0.12
NCDN-204ENST00000423723 COL13A1Q5TAT6 717 aaPredicted RBP14.29□□□□□ -0.12
NCDN-204ENST00000423723 CEP85Q6P2H3 762 aa14.29□□□□□ -0.12
NCDN-204ENST00000423723 ITPRIPQ8IWB1 547 aa14.29□□□□□ -0.12
NCDN-204ENST00000423723 REM2Q8IYK8 340 aaPredicted RBP14.29□□□□□ -0.12
NCDN-204ENST00000423723 PANK1Q8TE04 598 aa14.29□□□□□ -0.12
NCDN-204ENST00000423723 TEKT1Q969V4 418 aa14.29□□□□□ -0.12
NCDN-204ENST00000423723 FAM163AQ96GL9 167 aaPredicted RBP14.29□□□□□ -0.12
NCDN-204ENST00000423723 XAGE2Q96GT9 111 aa14.29□□□□□ -0.12
NCDN-204ENST00000423723 TDRD3Q9H7E2 651 aaKnown RBP14.29□□□□□ -0.12
NCDN-204ENST00000423723 MAST3O60307 1309 aa14.29□□□□□ -0.12
NCDN-204ENST00000423723 ARAP2Q8WZ64 1704 aa14.29□□□□□ -0.12
NCDN-204ENST00000423723 NF2P35240 595 aa14.28□□□□□ -0.12
NCDN-204ENST00000423723 ANP32AP39687 249 aaKnown RBP14.28□□□□□ -0.12
NCDN-204ENST00000423723 ZNF157P51786 506 aaPredicted RBP14.28□□□□□ -0.12
NCDN-204ENST00000423723 TNFAIP1Q13829 316 aa14.28□□□□□ -0.12
NCDN-204ENST00000423723 RASA3Q14644 834 aa14.28□□□□□ -0.12
NCDN-204ENST00000423723 MVPQ14764 893 aaKnown RBP14.28□□□□□ -0.12
NCDN-204ENST00000423723 SUPT20HL1Q3ZLR7 823 aa14.28□□□□□ -0.12
NCDN-204ENST00000423723 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
NCDN-204ENST00000423723 FAM83AQ86UY5 434 aa14.28□□□□□ -0.12
NCDN-204ENST00000423723 ZNF512BQ96KM6 892 aaPredicted RBP14.28□□□□□ -0.12
NCDN-204ENST00000423723 ECM29Q5VYK3 1845 aa14.27□□□□□ -0.12
NCDN-204ENST00000423723 CLRN2A0PK11 232 aa14.27□□□□□ -0.13
NCDN-204ENST00000423723 UBE2Q2LH0YL09 131 aa14.27□□□□□ -0.13
NCDN-204ENST00000423723 HSPA8P11142 646 aaKnown RBP14.27□□□□□ -0.13
NCDN-204ENST00000423723 PDE4AP27815 886 aa14.27□□□□□ -0.13
NCDN-204ENST00000423723 ARID4AP29374 1257 aaPredicted RBP14.27□□□□□ -0.13
NCDN-204ENST00000423723 RASGRF1Q13972 1273 aa14.27□□□□□ -0.13
NCDN-204ENST00000423723 MOB2Q70IA6 237 aa14.27□□□□□ -0.13
NCDN-204ENST00000423723 RASAL3Q86YV0 1011 aa14.27□□□□□ -0.13
NCDN-204ENST00000423723 CSRNP1Q96S65 589 aa14.27□□□□□ -0.13
NCDN-204ENST00000423723 BACH2Q9BYV9 841 aa14.27□□□□□ -0.13
NCDN-204ENST00000423723 DDX19BQ9UMR2 479 aa14.27□□□□□ -0.13
NCDN-204ENST00000423723 SSC5DA1L4H1 1573 aa14.26□□□□□ -0.13
NCDN-204ENST00000423723 IGSF3O75054 1194 aa14.26□□□□□ -0.13
NCDN-204ENST00000423723 USP2O75604 605 aaPredicted RBP14.26□□□□□ -0.13
NCDN-204ENST00000423723 PRDX5P30044 214 aa14.26□□□□□ -0.13
NCDN-204ENST00000423723 RBM5P52756 815 aaKnown RBP eCLIP14.26□□□□□ -0.13
NCDN-204ENST00000423723 KIF23Q02241 960 aaPredicted RBP14.26□□□□□ -0.13
NCDN-204ENST00000423723 NBPF12Q5TAG4 269 aaPredicted RBP14.26□□□□□ -0.13
NCDN-204ENST00000423723 ERICH6Q7L0X2 663 aa14.26□□□□□ -0.13
NCDN-204ENST00000423723 ARMC9Q7Z3E5 817 aa14.26□□□□□ -0.13
NCDN-204ENST00000423723 RPAP2Q8IXW5 612 aaPredicted RBP14.26□□□□□ -0.13
NCDN-204ENST00000423723 ZGPATQ8N5A5 531 aaKnown RBP14.26□□□□□ -0.13
NCDN-204ENST00000423723 GAKO14976 1311 aa14.25□□□□□ -0.13
NCDN-204ENST00000423723 SURF6O75683 361 aaKnown RBP14.25□□□□□ -0.13
NCDN-204ENST00000423723 TM4SF4P48230 202 aa14.25□□□□□ -0.13
NCDN-204ENST00000423723 TNNI3KQ59H18 835 aa14.25□□□□□ -0.13
NCDN-204ENST00000423723 PAXIP1Q6ZW49 1069 aaPredicted RBP14.25□□□□□ -0.13
NCDN-204ENST00000423723 AIDAQ96BJ3 306 aa14.25□□□□□ -0.13
NCDN-204ENST00000423723 C1orf115Q9H7X2 142 aa14.25□□□□□ -0.13
NCDN-204ENST00000423723 SAGE1Q9NXZ1 904 aa14.25□□□□□ -0.13
NCDN-204ENST00000423723 HMG20BQ9P0W2 317 aa14.25□□□□□ -0.13
NCDN-204ENST00000423723 DAGLAQ9Y4D2 1042 aa14.25□□□□□ -0.13
NCDN-204ENST00000423723 FPGT-TNNI3KV9GXZ4 949 aa14.25□□□□□ -0.13
NCDN-204ENST00000423723 PPP1R12BO60237 982 aaPredicted RBP14.24□□□□□ -0.13
NCDN-204ENST00000423723 LDHBP07195 334 aaKnown RBP14.24□□□□□ -0.13
NCDN-204ENST00000423723 SIRT2Q8IXJ6 389 aa14.24□□□□□ -0.13
NCDN-204ENST00000423723 CHMP4BQ9H444 224 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms