RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 INTS3Q68E01 1043 aaKnown RBP11.57□□□□□ -0.56
NUP50-206ENST00000422489 ATG9AQ7Z3C6 839 aa11.57□□□□□ -0.56
NUP50-206ENST00000422489 REM2Q8IYK8 340 aaPredicted RBP11.57□□□□□ -0.56
NUP50-206ENST00000422489 DZIP1LQ8IYY4 767 aaKnown RBP11.57□□□□□ -0.56
NUP50-206ENST00000422489 ABHD8Q96I13 439 aa11.57□□□□□ -0.56
NUP50-206ENST00000422489 PA2G4Q9UQ80 394 aaKnown RBP11.57□□□□□ -0.56
NUP50-206ENST00000422489 TNNQ9UQP3 1299 aa11.57□□□□□ -0.56
NUP50-206ENST00000422489 PPP2R3BQ9Y5P8 575 aa11.57□□□□□ -0.56
NUP50-206ENST00000422489 CACNA1FO60840 1977 aa11.57□□□□□ -0.56
NUP50-206ENST00000422489 CCDC85CA6NKD9 419 aa11.56□□□□□ -0.56
NUP50-206ENST00000422489 DGKZQ13574 1117 aa11.56□□□□□ -0.56
NUP50-206ENST00000422489 ATP2B3Q16720 1220 aa11.56□□□□□ -0.56
NUP50-206ENST00000422489 SRGAP3O43295 1099 aa11.55□□□□□ -0.56
NUP50-206ENST00000422489 CIAO1O76071 339 aa11.55□□□□□ -0.56
NUP50-206ENST00000422489 TBC1D8O95759 1140 aa11.55□□□□□ -0.56
NUP50-206ENST00000422489 IL15P40933 162 aaPredicted RBP11.55□□□□□ -0.56
NUP50-206ENST00000422489 TNNI2P48788 182 aa11.55□□□□□ -0.56
NUP50-206ENST00000422489 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
NUP50-206ENST00000422489 LDLRAD1Q5T700 205 aa11.55□□□□□ -0.56
NUP50-206ENST00000422489 ATF7IPQ6VMQ6 1270 aa11.55□□□□□ -0.56
NUP50-206ENST00000422489 TEKT1Q969V4 418 aa11.55□□□□□ -0.56
NUP50-206ENST00000422489 GNL3LQ9NVN8 582 aaKnown RBP11.55□□□□□ -0.56
NUP50-206ENST00000422489 SAGE1Q9NXZ1 904 aa11.55□□□□□ -0.56
NUP50-206ENST00000422489 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
NUP50-206ENST00000422489 USP2O75604 605 aaPredicted RBP11.54□□□□□ -0.56
NUP50-206ENST00000422489 GNAI2P04899 355 aa11.54□□□□□ -0.56
NUP50-206ENST00000422489 TRIM27P14373 513 aa11.54□□□□□ -0.56
NUP50-206ENST00000422489 IREB2P48200 963 aaKnown RBP11.54□□□□□ -0.56
NUP50-206ENST00000422489 CACNB3P54284 484 aa11.54□□□□□ -0.56
NUP50-206ENST00000422489 TIMM10P62072 90 aa11.54□□□□□ -0.56
NUP50-206ENST00000422489 TNFAIP1Q13829 316 aa11.54□□□□□ -0.56
NUP50-206ENST00000422489 ZKSCAN2Q63HK3 967 aa11.54□□□□□ -0.56
NUP50-206ENST00000422489 WDR66Q8TBY9 1149 aa11.54□□□□□ -0.56
NUP50-206ENST00000422489 CLMNQ96JQ2 1002 aa11.54□□□□□ -0.56
NUP50-206ENST00000422489 MCOLN1Q9GZU1 580 aa11.54□□□□□ -0.56
NUP50-206ENST00000422489 COPRSQ9NQ92 184 aa11.54□□□□□ -0.56
NUP50-206ENST00000422489 TM4SF4P48230 202 aa11.53□□□□□ -0.56
NUP50-206ENST00000422489 HDLBPQ00341 1268 aaKnown RBP11.53□□□□□ -0.56
NUP50-206ENST00000422489 SREBF2Q12772 1141 aa11.53□□□□□ -0.56
NUP50-206ENST00000422489 TFCP2Q12800 502 aa11.53□□□□□ -0.56
NUP50-206ENST00000422489 SPRYD7Q5W111 196 aa11.53□□□□□ -0.56
NUP50-206ENST00000422489 NEUROD6Q96NK8 337 aa11.53□□□□□ -0.56
NUP50-206ENST00000422489 TMEM39BQ9GZU3 492 aa11.53□□□□□ -0.56
NUP50-206ENST00000422489 TMOD2Q9NZR1 351 aa11.53□□□□□ -0.56
NUP50-206ENST00000422489 ADORA1P30542 326 aa11.52□□□□□ -0.57
NUP50-206ENST00000422489 PHKA1P46020 1223 aa11.52□□□□□ -0.57
NUP50-206ENST00000422489 G3BP1Q13283 466 aaKnown RBP eCLIP11.52□□□□□ -0.57
NUP50-206ENST00000422489 MAP3K11Q16584 847 aa11.52□□□□□ -0.57
NUP50-206ENST00000422489 ANKRD13AQ8IZ07 590 aa11.52□□□□□ -0.57
NUP50-206ENST00000422489 TMEM57Q8N5G2 664 aa11.52□□□□□ -0.57
NUP50-206ENST00000422489 MRIQ9BWK5 157 aa11.52□□□□□ -0.57
NUP50-206ENST00000422489 ELP3Q9H9T3 547 aa11.52□□□□□ -0.57
NUP50-206ENST00000422489 SUGT1Q9Y2Z0 365 aa11.52□□□□□ -0.57
NUP50-206ENST00000422489 POLR2AP24928 1970 aaKnown RBP11.52□□□□□ -0.57
NUP50-206ENST00000422489 PCNTO95613 3336 aa11.51□□□□□ -0.57
NUP50-206ENST00000422489 THSD7BQ9C0I4 1608 aa11.51□□□□□ -0.57
NUP50-206ENST00000422489 LDHBP07195 334 aaKnown RBP11.51□□□□□ -0.57
NUP50-206ENST00000422489 GORABQ5T7V8 394 aa11.51□□□□□ -0.57
NUP50-206ENST00000422489 APOBEC3HQ6NTF7 200 aaKnown RBP11.51□□□□□ -0.57
NUP50-206ENST00000422489 HHIPL2Q6UWX4 724 aa11.51□□□□□ -0.57
NUP50-206ENST00000422489 CDAN1Q8IWY9 1227 aa11.51□□□□□ -0.57
NUP50-206ENST00000422489 WNK4Q96J92 1243 aa11.51□□□□□ -0.57
NUP50-206ENST00000422489 ZDHHC15Q96MV8 337 aa11.51□□□□□ -0.57
NUP50-206ENST00000422489 DENND2AQ9ULE3 1009 aa11.51□□□□□ -0.57
NUP50-206ENST00000422489 AKAP2Q9Y2D5 859 aa11.51□□□□□ -0.57
NUP50-206ENST00000422489 MAST3O60307 1309 aa11.51□□□□□ -0.57
NUP50-206ENST00000422489 PSME4Q14997 1843 aa11.51□□□□□ -0.57
NUP50-206ENST00000422489 COL1A1P02452 1464 aaPredicted RBP11.51□□□□□ -0.57
NUP50-206ENST00000422489 PAPPA2Q9BXP8 1791 aa11.5□□□□□ -0.57
NUP50-206ENST00000422489 MANSC4A6NHS7 340 aaPredicted RBP11.5□□□□□ -0.57
NUP50-206ENST00000422489 INHBEP58166 350 aa11.5□□□□□ -0.57
NUP50-206ENST00000422489 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
NUP50-206ENST00000422489 DIXDC1Q155Q3 683 aa11.5□□□□□ -0.57
NUP50-206ENST00000422489 CCDC102BQ68D86 513 aa11.5□□□□□ -0.57
NUP50-206ENST00000422489 FTSJ3Q8IY81 847 aaKnown RBP11.5□□□□□ -0.57
NUP50-206ENST00000422489 TEPSINQ96N21 525 aa11.5□□□□□ -0.57
NUP50-206ENST00000422489 USP40Q9NVE5 1235 aa11.5□□□□□ -0.57
NUP50-206ENST00000422489 ABCF2Q9UG63 623 aa11.5□□□□□ -0.57
NUP50-206ENST00000422489 PNMA6EA0A0J9YXQ4 647 aa11.49□□□□□ -0.57
NUP50-206ENST00000422489 A0A1B0GUL7 405 aa11.49□□□□□ -0.57
NUP50-206ENST00000422489 UNCXA6NJT0 531 aa11.49□□□□□ -0.57
NUP50-206ENST00000422489 GPR25O00155 361 aa11.49□□□□□ -0.57
NUP50-206ENST00000422489 SEMA3EO15041 775 aa11.49□□□□□ -0.57
NUP50-206ENST00000422489 ZBTB48P10074 688 aaPredicted RBP11.49□□□□□ -0.57
NUP50-206ENST00000422489 PRDX5P30044 214 aa11.49□□□□□ -0.57
NUP50-206ENST00000422489 TCP10Q12799 353 aa11.49□□□□□ -0.57
NUP50-206ENST00000422489 OS9Q13438 667 aaPredicted RBP11.49□□□□□ -0.57
NUP50-206ENST00000422489 MTX1Q13505 466 aa11.49□□□□□ -0.57
NUP50-206ENST00000422489 ZNF296Q8WUU4 475 aaPredicted RBP11.49□□□□□ -0.57
NUP50-206ENST00000422489 OPTNQ96CV9 577 aa11.49□□□□□ -0.57
NUP50-206ENST00000422489 XAGE2Q96GT9 111 aa11.49□□□□□ -0.57
NUP50-206ENST00000422489 CSADQ9Y600 493 aa11.49□□□□□ -0.57
NUP50-206ENST00000422489 ALDH1A1P00352 501 aa11.48□□□□□ -0.57
NUP50-206ENST00000422489 MVPQ14764 893 aaKnown RBP11.48□□□□□ -0.57
NUP50-206ENST00000422489 OTUD7BQ6GQQ9 843 aa11.48□□□□□ -0.57
NUP50-206ENST00000422489 CDC42EP5Q6NZY7 148 aa11.48□□□□□ -0.57
NUP50-206ENST00000422489 MIGA2Q7L4E1 593 aa11.48□□□□□ -0.57
NUP50-206ENST00000422489 CTU1Q7Z7A3 348 aaKnown RBP11.48□□□□□ -0.57
NUP50-206ENST00000422489 IFNL1Q8IU54 200 aa11.48□□□□□ -0.57
NUP50-206ENST00000422489 ITPRIPQ8IWB1 547 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms