RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
CHRD-204ENST00000420973 M0R2C6 588 aa16.81■□□□□ 0.28
CHRD-204ENST00000420973 BRD1O95696 1058 aa16.81■□□□□ 0.28
CHRD-204ENST00000420973 MAP2K2P36507 400 aa16.81■□□□□ 0.28
CHRD-204ENST00000420973 CDC37L1Q7L3B6 337 aa16.81■□□□□ 0.28
CHRD-204ENST00000420973 INCENPQ9NQS7 918 aa16.81■□□□□ 0.28
CHRD-204ENST00000420973 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
CHRD-204ENST00000420973 TRPM3Q9HCF6 1732 aaPredicted RBP16.81■□□□□ 0.28
CHRD-204ENST00000420973 ZSCAN22P10073 491 aaPredicted RBP16.8■□□□□ 0.28
CHRD-204ENST00000420973 ITPK1Q13572 414 aa16.8■□□□□ 0.28
CHRD-204ENST00000420973 ISCA1Q9BUE6 129 aa16.8■□□□□ 0.28
CHRD-204ENST00000420973 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.8■□□□□ 0.28
CHRD-204ENST00000420973 RRP15Q9Y3B9 282 aaKnown RBP16.8■□□□□ 0.28
CHRD-204ENST00000420973 NKX1-1Q15270 411 aaPredicted RBP16.8■□□□□ 0.28
CHRD-204ENST00000420973 SRP68Q9UHB9 627 aaKnown RBP16.8■□□□□ 0.28
CHRD-204ENST00000420973 PCCAP05165 728 aaPredicted RBP16.8■□□□□ 0.28
CHRD-204ENST00000420973 CREBRFQ8IUR6 639 aa16.8■□□□□ 0.28
CHRD-204ENST00000420973 PUS7LQ9H0K6 701 aaKnown RBP16.8■□□□□ 0.28
CHRD-204ENST00000420973 ZNF215Q9UL58 517 aaPredicted RBP16.8■□□□□ 0.28
CHRD-204ENST00000420973 RNF113AO15541 343 aaKnown RBP16.79■□□□□ 0.28
CHRD-204ENST00000420973 RPS6KB1P23443 525 aa16.79■□□□□ 0.28
CHRD-204ENST00000420973 RPAINQ86UA6 219 aa16.79■□□□□ 0.28
CHRD-204ENST00000420973 BICD2Q8TD16 824 aa16.79■□□□□ 0.28
CHRD-204ENST00000420973 ZSWIM6Q9HCJ5 1215 aa16.79■□□□□ 0.28
CHRD-204ENST00000420973 ZNF446Q9NWS9 450 aa16.79■□□□□ 0.28
CHRD-204ENST00000420973 LRP2BPQ9P2M1 347 aa16.79■□□□□ 0.28
CHRD-204ENST00000420973 TPM4P67936 248 aa16.79■□□□□ 0.28
CHRD-204ENST00000420973 MNS1Q8NEH6 495 aa16.79■□□□□ 0.28
CHRD-204ENST00000420973 TTC14Q96N46 770 aa16.79■□□□□ 0.28
CHRD-204ENST00000420973 NCOA3Q9Y6Q9 1424 aa16.79■□□□□ 0.28
CHRD-204ENST00000420973 CPLX1O14810 134 aa16.79■□□□□ 0.28
CHRD-204ENST00000420973 HSPD1P10809 573 aaKnown RBP16.79■□□□□ 0.28
CHRD-204ENST00000420973 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
CHRD-204ENST00000420973 GNPATO15228 680 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 IGHMBP2P38935 993 aaKnown RBP16.78■□□□□ 0.28
CHRD-204ENST00000420973 LMAN1P49257 510 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 BCAMP50895 628 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 RBM6P78332 1123 aaKnown RBP16.78■□□□□ 0.28
CHRD-204ENST00000420973 NFXL1Q6ZNB6 911 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 UTP14AQ9BVJ6 771 aaKnown RBP16.78■□□□□ 0.28
CHRD-204ENST00000420973 MAST3O60307 1309 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 SH3TC1Q8TE82 1336 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 CUL4AQ13619 759 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 SKIDA1Q1XH10 827 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 GIMAP6Q6P9H5 292 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 AIDAQ96BJ3 306 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 SGSM3Q96HU1 749 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 DENND2AQ9ULE3 1009 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 UBN2Q6ZU65 1347 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 ZNF609O15014 1411 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 F13A1P00488 732 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 PTGS1P23219 599 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 RAI14Q9P0K7 980 aa16.78■□□□□ 0.28
CHRD-204ENST00000420973 ZKSCAN3Q9BRR0 538 aa16.77■□□□□ 0.28
CHRD-204ENST00000420973 SH3BP1Q9Y3L3 701 aa16.77■□□□□ 0.28
CHRD-204ENST00000420973 CACNA1FO60840 1977 aa16.77■□□□□ 0.28
CHRD-204ENST00000420973 MINDY4BA8MYZ0 360 aa16.77■□□□□ 0.27
CHRD-204ENST00000420973 ANKRD65E5RJM6 399 aa16.77■□□□□ 0.27
CHRD-204ENST00000420973 MCAMP43121 646 aa16.77■□□□□ 0.27
CHRD-204ENST00000420973 TRDNQ13061 729 aa16.77■□□□□ 0.27
CHRD-204ENST00000420973 STOX1Q6ZVD7 989 aa16.77■□□□□ 0.27
CHRD-204ENST00000420973 CEP120Q8N960 986 aa16.77■□□□□ 0.27
CHRD-204ENST00000420973 LMO7Q8WWI1 1683 aa16.77■□□□□ 0.27
CHRD-204ENST00000420973 GPAA1O43292 621 aa16.76■□□□□ 0.27
CHRD-204ENST00000420973 ATP2B1P20020 1258 aa16.76■□□□□ 0.27
CHRD-204ENST00000420973 CKAP2LQ8IYA6 745 aa16.76■□□□□ 0.27
CHRD-204ENST00000420973 MAGEB6Q8N7X4 407 aa16.76■□□□□ 0.27
CHRD-204ENST00000420973 MYL10Q9BUA6 226 aa16.76■□□□□ 0.27
CHRD-204ENST00000420973 PDE8AO60658 829 aa16.76■□□□□ 0.27
CHRD-204ENST00000420973 INTS4Q96HW7 963 aaKnown RBP16.76■□□□□ 0.27
CHRD-204ENST00000420973 GJB4Q9NTQ9 266 aa16.76■□□□□ 0.27
CHRD-204ENST00000420973 MPHOSPH10O00566 681 aaKnown RBP16.76■□□□□ 0.27
CHRD-204ENST00000420973 CALRP27797 417 aaKnown RBP16.76■□□□□ 0.27
CHRD-204ENST00000420973 ZSCAN31Q96LW9 406 aaPredicted RBP16.76■□□□□ 0.27
CHRD-204ENST00000420973 PAXBP1Q9Y5B6 917 aa16.76■□□□□ 0.27
CHRD-204ENST00000420973 KDM3BQ7LBC6 1761 aa16.75■□□□□ 0.27
CHRD-204ENST00000420973 GYG1P46976 350 aa16.75■□□□□ 0.27
CHRD-204ENST00000420973 GNL2Q13823 731 aaKnown RBP16.75■□□□□ 0.27
CHRD-204ENST00000420973 CCDC102BQ68D86 513 aa16.75■□□□□ 0.27
CHRD-204ENST00000420973 WWC3Q9ULE0 1092 aa16.75■□□□□ 0.27
CHRD-204ENST00000420973 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
CHRD-204ENST00000420973 MNAT1P51948 309 aa16.75■□□□□ 0.27
CHRD-204ENST00000420973 ST5P78524 1137 aa16.75■□□□□ 0.27
CHRD-204ENST00000420973 IMMTQ16891 758 aaKnown RBP16.75■□□□□ 0.27
CHRD-204ENST00000420973 MICU3Q86XE3 530 aa16.75■□□□□ 0.27
CHRD-204ENST00000420973 FTOQ9C0B1 505 aaKnown RBP eCLIP16.75■□□□□ 0.27
CHRD-204ENST00000420973 USP21Q9UK80 565 aa16.75■□□□□ 0.27
CHRD-204ENST00000420973 USP42Q9H9J4 1324 aaKnown RBP16.75■□□□□ 0.27
CHRD-204ENST00000420973 ZNF213O14771 459 aa16.75■□□□□ 0.27
CHRD-204ENST00000420973 CYP2E1P05181 493 aaPredicted RBP16.75■□□□□ 0.27
CHRD-204ENST00000420973 POLR3DP05423 398 aaPredicted RBP16.75■□□□□ 0.27
CHRD-204ENST00000420973 SH2B1Q9NRF2 756 aaPredicted RBP16.75■□□□□ 0.27
CHRD-204ENST00000420973 ATP6V1DQ9Y5K8 247 aa16.75■□□□□ 0.27
CHRD-204ENST00000420973 COL15A1P39059 1388 aa16.74■□□□□ 0.27
CHRD-204ENST00000420973 E7EWF7 191 aa16.74■□□□□ 0.27
CHRD-204ENST00000420973 FGAP02671 866 aa16.74■□□□□ 0.27
CHRD-204ENST00000420973 TPM3P06753 285 aa16.74■□□□□ 0.27
CHRD-204ENST00000420973 TOB2Q14106 344 aaPredicted RBP16.74■□□□□ 0.27
CHRD-204ENST00000420973 CEP135Q66GS9 1140 aa16.74■□□□□ 0.27
CHRD-204ENST00000420973 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms