RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 KLHDC4Q8TBB5 520 aa30.72■■■□□ 2.51
AC005540.1-201ENST00000413911 OTOFQ9HC10 1997 aa30.72■■■□□ 2.51
AC005540.1-201ENST00000413911 CRKP46108 304 aa30.71■■■□□ 2.51
AC005540.1-201ENST00000413911 PTPN18Q99952 460 aa30.71■■■□□ 2.51
AC005540.1-201ENST00000413911 ANKRD13AQ8IZ07 590 aa30.7■■■□□ 2.51
AC005540.1-201ENST00000413911 SSH1Q8WYL5 1049 aa30.7■■■□□ 2.51
AC005540.1-201ENST00000413911 TCP10L2B9ZVM9 353 aa30.69■■■□□ 2.5
AC005540.1-201ENST00000413911 METTL24Q5JXM2 366 aa30.69■■■□□ 2.5
AC005540.1-201ENST00000413911 TMEM39BQ9GZU3 492 aa30.69■■■□□ 2.5
AC005540.1-201ENST00000413911 CHAF1AQ13111 956 aaPredicted RBP30.68■■■□□ 2.5
AC005540.1-201ENST00000413911 TNFAIP1Q13829 316 aa30.68■■■□□ 2.5
AC005540.1-201ENST00000413911 USP44Q9H0E7 712 aa30.68■■■□□ 2.5
AC005540.1-201ENST00000413911 ELP3Q9H9T3 547 aa30.68■■■□□ 2.5
AC005540.1-201ENST00000413911 PDE8BO95263 885 aa30.67■■■□□ 2.5
AC005540.1-201ENST00000413911 CRHR2Q13324 411 aa30.67■■■□□ 2.5
AC005540.1-201ENST00000413911 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.67■■■□□ 2.5
AC005540.1-201ENST00000413911 CNKSR2Q8WXI2 1034 aa30.67■■■□□ 2.5
AC005540.1-201ENST00000413911 TESPA1A2RU30 521 aaPredicted RBP30.66■■■□□ 2.5
AC005540.1-201ENST00000413911 BCAMP50895 628 aa30.66■■■□□ 2.5
AC005540.1-201ENST00000413911 OTOP1Q7RTM1 612 aa30.66■■■□□ 2.5
AC005540.1-201ENST00000413911 VPS37DQ86XT2 251 aa30.66■■■□□ 2.5
AC005540.1-201ENST00000413911 OPTNQ96CV9 577 aa30.66■■■□□ 2.5
AC005540.1-201ENST00000413911 PTPRCP08575 1304 aa30.66■■■□□ 2.5
AC005540.1-201ENST00000413911 CAP1Q01518 475 aa30.65■■■□□ 2.5
AC005540.1-201ENST00000413911 MS4A4AQ96JQ5 239 aa30.65■■■□□ 2.5
AC005540.1-201ENST00000413911 TRIM17Q9Y577 477 aa30.65■■■□□ 2.5
AC005540.1-201ENST00000413911 CENPFP49454 3210 aa30.65■■■□□ 2.5
AC005540.1-201ENST00000413911 CACNB3P54284 484 aa30.64■■■□□ 2.5
AC005540.1-201ENST00000413911 FGFR2P21802 821 aa30.63■■■□□ 2.49
AC005540.1-201ENST00000413911 RFX5P48382 616 aaPredicted RBP30.62■■■□□ 2.49
AC005540.1-201ENST00000413911 HDLBPQ00341 1268 aaKnown RBP30.62■■■□□ 2.49
AC005540.1-201ENST00000413911 CAVIN4Q5BKX8 364 aa30.62■■■□□ 2.49
AC005540.1-201ENST00000413911 E9PSI1 815 aa30.61■■■□□ 2.49
AC005540.1-201ENST00000413911 SLFN5Q08AF3 891 aa30.61■■■□□ 2.49
AC005540.1-201ENST00000413911 VGLL4Q14135 290 aa30.61■■■□□ 2.49
AC005540.1-201ENST00000413911 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.61■■■□□ 2.49
AC005540.1-201ENST00000413911 CD99L2Q8TCZ2 262 aa30.61■■■□□ 2.49
AC005540.1-201ENST00000413911 TBC1D22AQ8WUA7 517 aa30.61■■■□□ 2.49
AC005540.1-201ENST00000413911 FRAT2O75474 233 aaPredicted RBP30.6■■■□□ 2.49
AC005540.1-201ENST00000413911 MAP3K9P80192 1104 aa30.6■■■□□ 2.49
AC005540.1-201ENST00000413911 BRI3BPQ8WY22 251 aa30.6■■■□□ 2.49
AC005540.1-201ENST00000413911 TNNI2P48788 182 aa30.59■■■□□ 2.49
AC005540.1-201ENST00000413911 OTUD7BQ6GQQ9 843 aa30.59■■■□□ 2.49
AC005540.1-201ENST00000413911 APOBEC3HQ6NTF7 200 aaKnown RBP30.59■■■□□ 2.49
AC005540.1-201ENST00000413911 TEKT1Q969V4 418 aa30.59■■■□□ 2.49
AC005540.1-201ENST00000413911 CDCA7LQ96GN5 454 aa30.59■■■□□ 2.49
AC005540.1-201ENST00000413911 MKI67P46013 3256 aaKnown RBP30.58■■■□□ 2.49
AC005540.1-201ENST00000413911 ZDHHC15Q96MV8 337 aa30.58■■■□□ 2.49
AC005540.1-201ENST00000413911 PUM3Q15397 648 aaKnown RBP30.57■■■□□ 2.48
AC005540.1-201ENST00000413911 ERO1AQ96HE7 468 aa30.57■■■□□ 2.48
AC005540.1-201ENST00000413911 MRIQ9BWK5 157 aa30.57■■■□□ 2.48
AC005540.1-201ENST00000413911 KIF16BQ96L93 1317 aa30.56■■■□□ 2.48
AC005540.1-201ENST00000413911 EYA2O00167 538 aa30.56■■■□□ 2.48
AC005540.1-201ENST00000413911 PRPF38BQ5VTL8 546 aaKnown RBP30.56■■■□□ 2.48
AC005540.1-201ENST00000413911 PTPN22Q9Y2R2 807 aa30.56■■■□□ 2.48
AC005540.1-201ENST00000413911 BRCA2P51587 3418 aa30.56■■■□□ 2.48
AC005540.1-201ENST00000413911 SP3Q02447 781 aa30.55■■■□□ 2.48
AC005540.1-201ENST00000413911 ATG9AQ7Z3C6 839 aa30.55■■■□□ 2.48
AC005540.1-201ENST00000413911 OTUD5Q96G74 571 aa30.55■■■□□ 2.48
AC005540.1-201ENST00000413911 CCL15-CCL14A0A0B4J2E2 113 aa30.54■■■□□ 2.48
AC005540.1-201ENST00000413911 POTEFA5A3E0 1075 aa30.54■■■□□ 2.48
AC005540.1-201ENST00000413911 IFIT1P09914 478 aaKnown RBP30.54■■■□□ 2.48
AC005540.1-201ENST00000413911 CCL15Q16663 113 aa30.54■■■□□ 2.48
AC005540.1-201ENST00000413911 FAM43AQ8N2R8 423 aa30.54■■■□□ 2.48
AC005540.1-201ENST00000413911 SNCAIPQ9Y6H5 919 aa30.54■■■□□ 2.48
AC005540.1-201ENST00000413911 ALDH1L2Q3SY69 923 aa30.53■■■□□ 2.48
AC005540.1-201ENST00000413911 EFCC1Q9HA90 598 aa30.53■■■□□ 2.48
AC005540.1-201ENST00000413911 CSADQ9Y600 493 aa30.53■■■□□ 2.48
AC005540.1-201ENST00000413911 SPDYE5A6NIY4 337 aa30.52■■■□□ 2.48
AC005540.1-201ENST00000413911 GTF2A2P52657 109 aa30.52■■■□□ 2.48
AC005540.1-201ENST00000413911 FAM83AQ86UY5 434 aa30.52■■■□□ 2.48
AC005540.1-201ENST00000413911 ZKSCAN4Q969J2 545 aaPredicted RBP30.52■■■□□ 2.48
AC005540.1-201ENST00000413911 SUGT1Q9Y2Z0 365 aa30.52■■■□□ 2.48
AC005540.1-201ENST00000413911 FKBP1CQ5VVH2 108 aa30.51■■■□□ 2.47
AC005540.1-201ENST00000413911 HHIPL2Q6UWX4 724 aa30.51■■■□□ 2.47
AC005540.1-201ENST00000413911 TRMT2AQ8IZ69 625 aaKnown RBP30.51■■■□□ 2.47
AC005540.1-201ENST00000413911 LPIN2Q92539 896 aa30.51■■■□□ 2.47
AC005540.1-201ENST00000413911 TAF1CQ15572 869 aaPredicted RBP30.5■■■□□ 2.47
AC005540.1-201ENST00000413911 WRNIP1Q96S55 665 aa30.5■■■□□ 2.47
AC005540.1-201ENST00000413911 SMC4Q9NTJ3 1288 aa30.5■■■□□ 2.47
AC005540.1-201ENST00000413911 SLC5A1P13866 664 aa30.49■■■□□ 2.47
AC005540.1-201ENST00000413911 MAST3O60307 1309 aa30.48■■■□□ 2.47
AC005540.1-201ENST00000413911 ARMC5Q96C12 935 aa30.48■■■□□ 2.47
AC005540.1-201ENST00000413911 SIL1Q9H173 461 aa30.48■■■□□ 2.47
AC005540.1-201ENST00000413911 TMOD2Q9NZR1 351 aa30.48■■■□□ 2.47
AC005540.1-201ENST00000413911 DIXDC1Q155Q3 683 aa30.47■■■□□ 2.47
AC005540.1-201ENST00000413911 INTS3Q68E01 1043 aaKnown RBP30.47■■■□□ 2.47
AC005540.1-201ENST00000413911 ERO1BQ86YB8 467 aa30.47■■■□□ 2.47
AC005540.1-201ENST00000413911 WDR66Q8TBY9 1149 aa30.47■■■□□ 2.47
AC005540.1-201ENST00000413911 ZFYVE28Q9HCC9 887 aa30.47■■■□□ 2.47
AC005540.1-201ENST00000413911 IRF6O14896 467 aa30.46■■■□□ 2.47
AC005540.1-201ENST00000413911 MIGA2Q7L4E1 593 aa30.46■■■□□ 2.47
AC005540.1-201ENST00000413911 DAGLAQ9Y4D2 1042 aa30.46■■■□□ 2.47
AC005540.1-201ENST00000413911 MYH13Q9UKX3 1938 aa30.45■■■□□ 2.47
AC005540.1-201ENST00000413911 RPAP1Q9BWH6 1393 aaPredicted RBP30.45■■■□□ 2.47
AC005540.1-201ENST00000413911 PRDX5P30044 214 aa30.45■■■□□ 2.47
AC005540.1-201ENST00000413911 NOB1Q9ULX3 412 aaKnown RBP30.45■■■□□ 2.47
AC005540.1-201ENST00000413911 KIAA0100Q14667 2235 aaKnown RBP30.45■■■□□ 2.46
AC005540.1-201ENST00000413911 BTBD19C9JJ37 291 aa30.44■■■□□ 2.46
AC005540.1-201ENST00000413911 UBTFL1P0CB47 393 aaPredicted RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms