RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TEPSINQ96N21 525 aa21.07■□□□□ 0.96
MRPL55-220ENST00000411464 NBPF7P0C2Y1 421 aaPredicted RBP21.06■□□□□ 0.96
MRPL55-220ENST00000411464 MAP3K9P80192 1104 aa21.06■□□□□ 0.96
MRPL55-220ENST00000411464 ARHGEF6Q15052 776 aa21.06■□□□□ 0.96
MRPL55-220ENST00000411464 KAZALD1Q96I82 304 aa21.06■□□□□ 0.96
MRPL55-220ENST00000411464 MS4A4AQ96JQ5 239 aa21.06■□□□□ 0.96
MRPL55-220ENST00000411464 TMEM39BQ9GZU3 492 aa21.06■□□□□ 0.96
MRPL55-220ENST00000411464 CSADQ9Y600 493 aa21.06■□□□□ 0.96
MRPL55-220ENST00000411464 POTEFA5A3E0 1075 aa21.05■□□□□ 0.96
MRPL55-220ENST00000411464 GTF2A2P52657 109 aa21.05■□□□□ 0.96
MRPL55-220ENST00000411464 CHAF1AQ13111 956 aaPredicted RBP21.05■□□□□ 0.96
MRPL55-220ENST00000411464 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.05■□□□□ 0.96
MRPL55-220ENST00000411464 FBXO33Q7Z6M2 555 aa21.05■□□□□ 0.96
MRPL55-220ENST00000411464 TBC1D22AQ8WUA7 517 aa21.05■□□□□ 0.96
MRPL55-220ENST00000411464 GCC1Q96CN9 775 aa21.05■□□□□ 0.96
MRPL55-220ENST00000411464 IQSEC3Q9UPP2 1182 aaPredicted RBP21.05■□□□□ 0.96
MRPL55-220ENST00000411464 HDLBPQ00341 1268 aaKnown RBP21.04■□□□□ 0.96
MRPL55-220ENST00000411464 METTL24Q5JXM2 366 aa21.04■□□□□ 0.96
MRPL55-220ENST00000411464 CDAN1Q8IWY9 1227 aa21.04■□□□□ 0.96
MRPL55-220ENST00000411464 ZFYVE28Q9HCC9 887 aa21.04■□□□□ 0.96
MRPL55-220ENST00000411464 CCL15-CCL14A0A0B4J2E2 113 aa21.03■□□□□ 0.96
MRPL55-220ENST00000411464 VGLL4Q14135 290 aa21.03■□□□□ 0.96
MRPL55-220ENST00000411464 CCL15Q16663 113 aa21.03■□□□□ 0.96
MRPL55-220ENST00000411464 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.03■□□□□ 0.96
MRPL55-220ENST00000411464 CNKSR2Q8WXI2 1034 aa21.03■□□□□ 0.96
MRPL55-220ENST00000411464 BRI3BPQ8WY22 251 aa21.03■□□□□ 0.96
MRPL55-220ENST00000411464 TEKT1Q969V4 418 aa21.03■□□□□ 0.96
MRPL55-220ENST00000411464 ARMC5Q96C12 935 aa21.03■□□□□ 0.96
MRPL55-220ENST00000411464 BICC1Q9H694 974 aaKnown RBP21.03■□□□□ 0.96
MRPL55-220ENST00000411464 UTYO14607 1347 aa21.03■□□□□ 0.96
MRPL55-220ENST00000411464 WDHD1O75717 1129 aaPredicted RBP21.02■□□□□ 0.96
MRPL55-220ENST00000411464 TAF1CQ15572 869 aaPredicted RBP21.02■□□□□ 0.96
MRPL55-220ENST00000411464 GRIK5Q16478 980 aa21.02■□□□□ 0.96
MRPL55-220ENST00000411464 LRRC24Q50LG9 513 aa21.02■□□□□ 0.96
MRPL55-220ENST00000411464 FAM9BQ8IZU0 186 aa21.02■□□□□ 0.96
MRPL55-220ENST00000411464 OTUD5Q96G74 571 aa21.02■□□□□ 0.96
MRPL55-220ENST00000411464 TMOD2Q9NZR1 351 aa21.02■□□□□ 0.96
MRPL55-220ENST00000411464 CACNA1FO60840 1977 aa21.01■□□□□ 0.95
MRPL55-220ENST00000411464 HTTP42858 3142 aa21.01■□□□□ 0.95
MRPL55-220ENST00000411464 PDE8BO95263 885 aa21.01■□□□□ 0.95
MRPL55-220ENST00000411464 RABL6Q3YEC7 729 aaPredicted RBP21.01■□□□□ 0.95
MRPL55-220ENST00000411464 TMEM106CQ9BVX2 250 aa21.01■□□□□ 0.95
MRPL55-220ENST00000411464 CACNB3P54284 484 aa21■□□□□ 0.95
MRPL55-220ENST00000411464 NBPF11Q86T75 865 aa21■□□□□ 0.95
MRPL55-220ENST00000411464 HOOK2Q96ED9 719 aa21■□□□□ 0.95
MRPL55-220ENST00000411464 MRIQ9BWK5 157 aa21■□□□□ 0.95
MRPL55-220ENST00000411464 EN2P19622 333 aaPredicted RBP20.99■□□□□ 0.95
MRPL55-220ENST00000411464 BCAMP50895 628 aa20.99■□□□□ 0.95
MRPL55-220ENST00000411464 FAM43AQ8N2R8 423 aa20.99■□□□□ 0.95
MRPL55-220ENST00000411464 ANKRD44Q8N8A2 993 aa20.99■□□□□ 0.95
MRPL55-220ENST00000411464 ZDHHC15Q96MV8 337 aa20.99■□□□□ 0.95
MRPL55-220ENST00000411464 SPDYE5A6NIY4 337 aa20.98■□□□□ 0.95
MRPL55-220ENST00000411464 CETPP11597 493 aa20.98■□□□□ 0.95
MRPL55-220ENST00000411464 CAP1Q01518 475 aa20.98■□□□□ 0.95
MRPL55-220ENST00000411464 FAM83AQ86UY5 434 aa20.98■□□□□ 0.95
MRPL55-220ENST00000411464 SUGT1Q9Y2Z0 365 aa20.98■□□□□ 0.95
MRPL55-220ENST00000411464 IFIT1P09914 478 aaKnown RBP20.97■□□□□ 0.95
MRPL55-220ENST00000411464 KIF22Q14807 665 aa20.97■□□□□ 0.95
MRPL55-220ENST00000411464 SLC9C1Q4G0N8 1177 aa20.97■□□□□ 0.95
MRPL55-220ENST00000411464 FKBP1CQ5VVH2 108 aa20.97■□□□□ 0.95
MRPL55-220ENST00000411464 ERO1BQ86YB8 467 aa20.97■□□□□ 0.95
MRPL55-220ENST00000411464 VGLL2Q8N8G2 317 aa20.97■□□□□ 0.95
MRPL55-220ENST00000411464 KLHDC4Q8TBB5 520 aa20.97■□□□□ 0.95
MRPL55-220ENST00000411464 WRNIP1Q96S55 665 aa20.97■□□□□ 0.95
MRPL55-220ENST00000411464 MAST3O60307 1309 aa20.97■□□□□ 0.95
MRPL55-220ENST00000411464 ECM29Q5VYK3 1845 aa20.97■□□□□ 0.95
MRPL55-220ENST00000411464 SNAPC2Q13487 334 aa20.96■□□□□ 0.95
MRPL55-220ENST00000411464 PUM3Q15397 648 aaKnown RBP20.96■□□□□ 0.95
MRPL55-220ENST00000411464 DCAF15Q66K64 600 aa20.96■□□□□ 0.95
MRPL55-220ENST00000411464 APOBEC3HQ6NTF7 200 aaKnown RBP20.96■□□□□ 0.95
MRPL55-220ENST00000411464 MRPL50Q8N5N7 158 aaKnown RBP20.96■□□□□ 0.95
MRPL55-220ENST00000411464 ZKSCAN4Q969J2 545 aaPredicted RBP20.96■□□□□ 0.95
MRPL55-220ENST00000411464 ZNF333Q96JL9 665 aa20.96■□□□□ 0.95
MRPL55-220ENST00000411464 SNCAIPQ9Y6H5 919 aa20.96■□□□□ 0.95
MRPL55-220ENST00000411464 PTPRCP08575 1304 aa20.96■□□□□ 0.95
MRPL55-220ENST00000411464 A0A1B0GUL6 1792 aa20.95■□□□□ 0.94
MRPL55-220ENST00000411464 TLR2O60603 784 aa20.95■□□□□ 0.94
MRPL55-220ENST00000411464 HHIPL2Q6UWX4 724 aa20.95■□□□□ 0.94
MRPL55-220ENST00000411464 ZCCHC17Q9NP64 241 aaKnown RBP20.95■□□□□ 0.94
MRPL55-220ENST00000411464 PTCH2Q9Y6C5 1203 aa20.95■□□□□ 0.94
MRPL55-220ENST00000411464 IRF6O14896 467 aa20.94■□□□□ 0.94
MRPL55-220ENST00000411464 SLC4A8Q2Y0W8 1093 aa20.94■□□□□ 0.94
MRPL55-220ENST00000411464 USP44Q9H0E7 712 aa20.94■□□□□ 0.94
MRPL55-220ENST00000411464 KIF16BQ96L93 1317 aa20.94■□□□□ 0.94
MRPL55-220ENST00000411464 MKI67P46013 3256 aaKnown RBP20.93■□□□□ 0.94
MRPL55-220ENST00000411464 BTBD19C9JJ37 291 aa20.93■□□□□ 0.94
MRPL55-220ENST00000411464 HABP4Q5JVS0 413 aaKnown RBP20.93■□□□□ 0.94
MRPL55-220ENST00000411464 WDR66Q8TBY9 1149 aa20.93■□□□□ 0.94
MRPL55-220ENST00000411464 CENPFP49454 3210 aa20.93■□□□□ 0.94
MRPL55-220ENST00000411464 SLC5A1P13866 664 aa20.92■□□□□ 0.94
MRPL55-220ENST00000411464 FGFR2P21802 821 aa20.92■□□□□ 0.94
MRPL55-220ENST00000411464 ZEB1P37275 1124 aaPredicted RBP20.92■□□□□ 0.94
MRPL55-220ENST00000411464 PPIL2Q13356 520 aa20.92■□□□□ 0.94
MRPL55-220ENST00000411464 MIGA2Q7L4E1 593 aa20.92■□□□□ 0.94
MRPL55-220ENST00000411464 ZNF341Q9BYN7 854 aa20.92■□□□□ 0.94
MRPL55-220ENST00000411464 ZNF316A6NFI3 1004 aaPredicted RBP20.91■□□□□ 0.94
MRPL55-220ENST00000411464 EYA2O00167 538 aa20.91■□□□□ 0.94
MRPL55-220ENST00000411464 MYCP01106 439 aaPredicted RBP20.91■□□□□ 0.94
MRPL55-220ENST00000411464 GNRH1P01148 92 aa20.91■□□□□ 0.94
MRPL55-220ENST00000411464 LACTBP83111 547 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms