RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ANGEL1Q9UNK9 670 aaKnown RBP19.66■□□□□ 0.74
NUP50-203ENST00000407019 KINO60870 393 aaKnown RBP19.66■□□□□ 0.74
NUP50-203ENST00000407019 SNW1Q13573 536 aaKnown RBP19.66■□□□□ 0.74
NUP50-203ENST00000407019 NOLC1Q14978 699 aaKnown RBP eCLIP19.66■□□□□ 0.74
NUP50-203ENST00000407019 OTUD7BQ6GQQ9 843 aa19.66■□□□□ 0.74
NUP50-203ENST00000407019 FSIP1Q8NA03 581 aa19.66■□□□□ 0.74
NUP50-203ENST00000407019 SPATA5Q8NB90 893 aa19.66■□□□□ 0.74
NUP50-203ENST00000407019 MPHOSPH8Q99549 860 aa19.66■□□□□ 0.74
NUP50-203ENST00000407019 ZMYM6O95789 1325 aa19.65■□□□□ 0.74
NUP50-203ENST00000407019 A0A0G2JS52 829 aa19.65■□□□□ 0.74
NUP50-203ENST00000407019 SH2B2O14492 632 aaPredicted RBP19.65■□□□□ 0.74
NUP50-203ENST00000407019 CRKLP46109 303 aaKnown RBP19.65■□□□□ 0.74
NUP50-203ENST00000407019 DDB1Q16531 1140 aa19.65■□□□□ 0.74
NUP50-203ENST00000407019 CYB5R4Q7L1T6 521 aa19.65■□□□□ 0.74
NUP50-203ENST00000407019 BRAPQ7Z569 592 aa19.65■□□□□ 0.74
NUP50-203ENST00000407019 ENGASEQ8NFI3 743 aa19.65■□□□□ 0.74
NUP50-203ENST00000407019 STRBPQ96SI9 672 aaKnown RBP19.65■□□□□ 0.74
NUP50-203ENST00000407019 C4AP0C0L4 1744 aa19.65■□□□□ 0.74
NUP50-203ENST00000407019 C4BP0C0L5 1744 aa19.65■□□□□ 0.74
NUP50-203ENST00000407019 ATP6V1AP38606 617 aa19.64■□□□□ 0.74
NUP50-203ENST00000407019 STX1AQ16623 288 aa19.64■□□□□ 0.74
NUP50-203ENST00000407019 PARP10Q53GL7 1025 aa19.64■□□□□ 0.74
NUP50-203ENST00000407019 FAM177BA6PVY3 158 aa19.64■□□□□ 0.73
NUP50-203ENST00000407019 MAP3K12Q12852 859 aa19.64■□□□□ 0.73
NUP50-203ENST00000407019 ALX1Q15699 326 aa19.64■□□□□ 0.73
NUP50-203ENST00000407019 RGS22Q8NE09 1264 aa19.64■□□□□ 0.73
NUP50-203ENST00000407019 MRPS27Q92552 414 aaKnown RBP19.64■□□□□ 0.73
NUP50-203ENST00000407019 KCNF1Q9H3M0 494 aa19.64■□□□□ 0.73
NUP50-203ENST00000407019 SPTLC3Q9NUV7 552 aa19.64■□□□□ 0.73
NUP50-203ENST00000407019 DENND2AQ9ULE3 1009 aa19.64■□□□□ 0.73
NUP50-203ENST00000407019 PCDHA7Q9UN72 937 aa19.64■□□□□ 0.73
NUP50-203ENST00000407019 THRAP3Q9Y2W1 955 aaKnown RBP19.64■□□□□ 0.73
NUP50-203ENST00000407019 MYO5AQ9Y4I1 1855 aaKnown RBP19.64■□□□□ 0.73
NUP50-203ENST00000407019 SPATA31A1Q5TZJ5 1347 aa19.64■□□□□ 0.73
NUP50-203ENST00000407019 YEATS4O95619 227 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 RASGRF1Q13972 1273 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 RREB1Q92766 1687 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 UQCRHLA0A096LP55 91 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 A0A1W2PQ27 194 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 A0A1W2PQ64 194 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 A0A1W2PQD8 194 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 B4E1Z4 1266 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 CAMTA2O94983 1202 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 UQCRHP07919 91 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 METAP2P50579 478 aaKnown RBP eCLIP19.63■□□□□ 0.73
NUP50-203ENST00000407019 STK38Q15208 465 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 CCDC152Q4G0S7 254 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 DNTTIP2Q5QJE6 756 aaKnown RBP19.63■□□□□ 0.73
NUP50-203ENST00000407019 ADALQ6DHV7 355 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.63■□□□□ 0.73
NUP50-203ENST00000407019 MAGEB6Q8N7X4 407 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 LINC00301Q8NCQ3 95 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 KCNG4Q8TDN1 519 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 TMEM87BQ96K49 555 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 SEC31BQ9NQW1 1179 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 POLR3EQ9NVU0 708 aa19.63■□□□□ 0.73
NUP50-203ENST00000407019 LOC102724428A0A0B4J2F2 783 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 CDKL5O76039 1030 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 ZNF75DP51815 510 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 SIK1P57059 783 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 SF3A1Q15459 793 aaKnown RBP19.62■□□□□ 0.73
NUP50-203ENST00000407019 MYSM1Q5VVJ2 828 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 PLA2G4DQ86XP0 818 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 ACSBG1Q96GR2 724 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 TRIM5Q9C035 493 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 CLIC4Q9Y696 253 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 NEDD4P46934 1319 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 DOCK2Q92608 1830 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 PHLPP1O60346 1717 aa19.62■□□□□ 0.73
NUP50-203ENST00000407019 PATL2C9JE40 543 aaKnown RBP19.61■□□□□ 0.73
NUP50-203ENST00000407019 MBD4O95243 580 aa19.61■□□□□ 0.73
NUP50-203ENST00000407019 POLR3DP05423 398 aaPredicted RBP19.61■□□□□ 0.73
NUP50-203ENST00000407019 RTL9Q8NET4 1388 aa19.61■□□□□ 0.73
NUP50-203ENST00000407019 NRAPQ86VF7 1730 aa19.61■□□□□ 0.73
NUP50-203ENST00000407019 IGHMBP2P38935 993 aaKnown RBP19.61■□□□□ 0.73
NUP50-203ENST00000407019 KIF23Q02241 960 aaPredicted RBP19.61■□□□□ 0.73
NUP50-203ENST00000407019 CPLX2Q6PUV4 134 aaKnown RBP19.61■□□□□ 0.73
NUP50-203ENST00000407019 APOA5Q6Q788 366 aa19.61■□□□□ 0.73
NUP50-203ENST00000407019 C11orf57Q6ZUT1 292 aaPredicted RBP19.61■□□□□ 0.73
NUP50-203ENST00000407019 C17orf53Q8N3J3 647 aaPredicted RBP19.61■□□□□ 0.73
NUP50-203ENST00000407019 NKX2-3Q8TAU0 364 aa19.61■□□□□ 0.73
NUP50-203ENST00000407019 KIAA1524Q8TCG1 905 aa19.61■□□□□ 0.73
NUP50-203ENST00000407019 NAPBQ9H115 298 aa19.61■□□□□ 0.73
NUP50-203ENST00000407019 GOLGA6L19H0YKK7 550 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 IQCB1Q15051 598 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 FMR1NBQ8N0W7 255 aaPredicted RBP19.6■□□□□ 0.73
NUP50-203ENST00000407019 EPB41L4AQ9HCS5 686 aaPredicted RBP19.6■□□□□ 0.73
NUP50-203ENST00000407019 GJB4Q9NTQ9 266 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 CICQ96RK0 1608 aaPredicted RBP19.6■□□□□ 0.73
NUP50-203ENST00000407019 KIF28PB7ZC32 967 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 SNAP23O00161 211 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 RRP9O43818 475 aaKnown RBP19.6■□□□□ 0.73
NUP50-203ENST00000407019 ADAMTS2O95450 1211 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 NTSR2O95665 410 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 PTGS1P23219 599 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 ITPK1Q13572 414 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 SYNE3Q6ZMZ3 975 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 DRC7Q8IY82 874 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 IFNL3Q8IZI9 196 aa19.6■□□□□ 0.73
NUP50-203ENST00000407019 ANO10Q9NW15 660 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms