RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 C1orf141Q5JVX7 400 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 PRPF40BQ6NWY9 871 aaKnown RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 JPH2Q9BR39 696 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 SRCIN1Q9C0H9 1055 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 CAPN7Q9Y6W3 813 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 UTYO14607 1347 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 FRMD3A2A2Y4 597 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 SLC3A2P08195 630 aaKnown RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 LMOD1P29536 600 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 MAGEA9P43362 315 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 KARSQ15046 597 aaKnown RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 CCAR1Q8IX12 1150 aaKnown RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 ZCRB1Q8TBF4 217 aaKnown RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 CBX8Q9HC52 389 aa6.72□□□□□ -1.33
HDAC9-203ENST00000406072 C9orf78Q9NZ63 289 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-203ENST00000406072 NRXN2Q9P2S2 1712 aa6.71□□□□□ -1.33
HDAC9-203ENST00000406072 CCDC175P0C221 793 aa6.71□□□□□ -1.33
HDAC9-203ENST00000406072 NEFHP12036 1026 aa6.71□□□□□ -1.33
HDAC9-203ENST00000406072 MAP2K1Q02750 393 aaPredicted RBP6.71□□□□□ -1.33
HDAC9-203ENST00000406072 SAFBQ15424 915 aaKnown RBP eCLIP6.71□□□□□ -1.33
HDAC9-203ENST00000406072 LMOD2Q6P5Q4 547 aa6.71□□□□□ -1.33
HDAC9-203ENST00000406072 ZNF530Q6P9A1 599 aaPredicted RBP6.71□□□□□ -1.33
HDAC9-203ENST00000406072 LRP10Q7Z4F1 713 aa6.71□□□□□ -1.33
HDAC9-203ENST00000406072 C16orf71Q8IYS4 520 aaPredicted RBP6.71□□□□□ -1.33
HDAC9-203ENST00000406072 MICAL1Q8TDZ2 1067 aa6.71□□□□□ -1.33
HDAC9-203ENST00000406072 SPATS2LQ9NUQ6 558 aaKnown RBP6.71□□□□□ -1.33
HDAC9-203ENST00000406072 GEMIN8Q9NWZ8 242 aaKnown RBP6.71□□□□□ -1.33
HDAC9-203ENST00000406072 CCDC196A0A1B0GTZ2 297 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 WDHD1O75717 1129 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-203ENST00000406072 CD2BP2O95400 341 aaKnown RBP6.71□□□□□ -1.34
HDAC9-203ENST00000406072 SLFN14P0C7P3 912 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 RBBP5Q15291 538 aaKnown RBP6.71□□□□□ -1.34
HDAC9-203ENST00000406072 TSHZ3Q63HK5 1081 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 MSL1Q68DK7 614 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 B4GALNT4Q76KP1 1039 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 ZNF710Q8N1W2 664 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 INTS4Q96HW7 963 aaKnown RBP6.71□□□□□ -1.34
HDAC9-203ENST00000406072 SLC24A3Q9HC58 644 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 IFNKQ9P0W0 207 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 DACH1Q9UI36 760 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 C4AP0C0L4 1744 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 C4BP0C0L5 1744 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 RAB11FIP3O75154 756 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 SEC31AO94979 1220 aaKnown RBP6.71□□□□□ -1.34
HDAC9-203ENST00000406072 MATR3P43243 847 aaKnown RBP eCLIP6.71□□□□□ -1.34
HDAC9-203ENST00000406072 G3BP1Q13283 466 aaKnown RBP eCLIP6.71□□□□□ -1.34
HDAC9-203ENST00000406072 LRRFIP1Q32MZ4 808 aaKnown RBP6.71□□□□□ -1.34
HDAC9-203ENST00000406072 HSP90AA4PQ58FG1 418 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 MMS22LQ6ZRQ5 1243 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 NECAB1Q8N987 351 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 CXorf56Q9H5V9 222 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 ZCCHC17Q9NP64 241 aaKnown RBP6.71□□□□□ -1.34
HDAC9-203ENST00000406072 NRBP1Q9UHY1 535 aa6.71□□□□□ -1.34
HDAC9-203ENST00000406072 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-203ENST00000406072 SLC4A2P04920 1241 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 PNMA6AP0CW24 399 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-203ENST00000406072 SETSIPP0DME0 302 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 EIF2S2P20042 333 aaKnown RBP6.7□□□□□ -1.34
HDAC9-203ENST00000406072 KMT5BQ4FZB7 885 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 KCTD17Q8N5Z5 321 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 LZTFL1Q9NQ48 299 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 ST7Q9NRC1 585 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 RIC1Q4ADV7 1423 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 UBAP1LF5GYI3 381 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 CLSTN1O94985 981 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 CLCN6P51797 869 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 GYS2P54840 703 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 ZC3H6P61129 1189 aaKnown RBP6.7□□□□□ -1.34
HDAC9-203ENST00000406072 GUCY1B3Q02153 619 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 CCDC30Q5VVM6 783 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 FBXO18Q8NFZ0 1043 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 SUFUQ9UMX1 484 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 RAD50Q92878 1312 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 A0A1B0GUL6 1792 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 A0A087WUV0 522 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-203ENST00000406072 CEP85LQ5SZL2 805 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 LARP1Q6PKG0 1096 aaKnown RBP6.7□□□□□ -1.34
HDAC9-203ENST00000406072 MAATS1Q7Z4T9 603 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 NUTM1Q86Y26 1132 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 EFCAB13Q8IY85 973 aa6.7□□□□□ -1.34
HDAC9-203ENST00000406072 OPA1O60313 960 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 HSF2BPO75031 334 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 BRD1O95696 1058 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 CHMP4BP1P59074 171 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 TRDNQ13061 729 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 NEDD9Q14511 834 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 SPECC1Q5M775 1068 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 KLHL10Q6JEL2 608 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 PPP4R3CPQ6ZMV5 832 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 C8orf58Q8NAV2 365 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 ODF2LQ9ULJ1 636 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 NSFL1CQ9UNZ2 370 aaKnown RBP6.69□□□□□ -1.34
HDAC9-203ENST00000406072 EIF3CLB5ME19 914 aaKnown RBP6.69□□□□□ -1.34
HDAC9-203ENST00000406072 KIF1CO43896 1103 aaKnown RBP6.69□□□□□ -1.34
HDAC9-203ENST00000406072 TUBBP07437 444 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 PAFAH1B1P43034 410 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 GPR161Q8N6U8 529 aaKnown RBP6.69□□□□□ -1.34
HDAC9-203ENST00000406072 CABLES1Q8TDN4 633 aa6.69□□□□□ -1.34
HDAC9-203ENST00000406072 EXOC4Q96A65 974 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms