RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 CALM2P0DP24 149 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 CALM3P0DP25 149 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 ARHGAP25P42331 645 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 LMBR1LQ6UX01 489 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 GDAP1L1Q96MZ0 367 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 KIF3CO14782 793 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 GIGYF1O75420 1035 aaPredicted RBP18.11■□□□□ 0.49
ITSN1-209ENST00000399352 ZNF445P59923 1031 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 VSIG1Q86XK7 387 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 PSMB7Q99436 277 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 NOC4LQ9BVI4 516 aaKnown RBP18.11■□□□□ 0.49
ITSN1-209ENST00000399352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.11■□□□□ 0.49
ITSN1-209ENST00000399352 VWA3AA6NCI4 1184 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 HLA-DOAP06340 250 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 ZNF131P52739 623 aa18.11■□□□□ 0.49
ITSN1-209ENST00000399352 DTNBO60941 627 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 BAIAP2L1Q9UHR4 511 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 GBP1P32455 592 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 JAKMIP2Q96AA8 810 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 CLSTN2Q9H4D0 955 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 GADD45BO75293 160 aaPredicted RBP18.1■□□□□ 0.49
ITSN1-209ENST00000399352 ZWINTO95229 277 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 HSPA1LP34931 641 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 GNAQP50148 359 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 MAPK8IP1Q9UQF2 711 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 GRM8O00222 908 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 FAM13AO94988 1023 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 PLS1Q14651 629 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 GKAP1Q5VSY0 366 aaPredicted RBP18.1■□□□□ 0.49
ITSN1-209ENST00000399352 CYP26C1Q6V0L0 522 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 GPIHBP1Q8IV16 184 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 IMPG2Q9BZV3 1241 aa18.1■□□□□ 0.49
ITSN1-209ENST00000399352 TNNI2P48788 182 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 TSNAXIP1Q2TAA8 658 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 DTHD1Q6ZMT9 781 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 EFCAB5A4FU69 1503 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 TTC21BQ7Z4L5 1316 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 INF2Q27J81 1249 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 HS2ST1Q7LGA3 356 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 CEP120Q8N960 986 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 XAGE3Q8WTP9 111 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 VCX3BQ9H321 246 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 FAM169AQ9Y6X4 670 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
ITSN1-209ENST00000399352 ATP5DP30049 168 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 SND1Q7KZF4 910 aaKnown RBP eCLIP18.09■□□□□ 0.49
ITSN1-209ENST00000399352 C6orf50Q9HD87 102 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 ZRANB1Q9UGI0 708 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 WASLO00401 505 aaPredicted RBP18.09■□□□□ 0.49
ITSN1-209ENST00000399352 FYB2Q5VWT5 728 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 ANKLE2Q86XL3 938 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 IFT20Q8IY31 132 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 KIAA1524Q8TCG1 905 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 TCHPQ9BT92 498 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 CALML3P27482 149 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 MCUR1Q96AQ8 359 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 ZBTB40Q9NUA8 1239 aa18.09■□□□□ 0.49
ITSN1-209ENST00000399352 TTC41PQ6P2S7 1318 aa18.08■□□□□ 0.49
ITSN1-209ENST00000399352 CCDC141Q6ZP82 1450 aa18.08■□□□□ 0.49
ITSN1-209ENST00000399352 NSD2O96028 1365 aa18.08■□□□□ 0.49
ITSN1-209ENST00000399352 ZNF174Q15697 407 aa18.08■□□□□ 0.48
ITSN1-209ENST00000399352 E7EVH7 732 aa18.08■□□□□ 0.48
ITSN1-209ENST00000399352 PSMD6Q15008 389 aa18.08■□□□□ 0.48
ITSN1-209ENST00000399352 TACO1Q9BSH4 297 aaKnown RBP18.08■□□□□ 0.48
ITSN1-209ENST00000399352 TUBB2AQ13885 445 aa18.08■□□□□ 0.48
ITSN1-209ENST00000399352 TUBB2BQ9BVA1 445 aa18.08■□□□□ 0.48
ITSN1-209ENST00000399352 TRAF5O00463 557 aa18.07■□□□□ 0.48
ITSN1-209ENST00000399352 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
ITSN1-209ENST00000399352 ERCC5P28715 1186 aaPredicted RBP18.07■□□□□ 0.48
ITSN1-209ENST00000399352 MRPS9P82933 396 aaKnown RBP18.07■□□□□ 0.48
ITSN1-209ENST00000399352 CCDC38Q502W7 563 aa18.07■□□□□ 0.48
ITSN1-209ENST00000399352 KLHL7Q8IXQ5 586 aa18.07■□□□□ 0.48
ITSN1-209ENST00000399352 SPOPO43791 374 aa18.07■□□□□ 0.48
ITSN1-209ENST00000399352 SNRPA1P09661 255 aaKnown RBP18.07■□□□□ 0.48
ITSN1-209ENST00000399352 GPR161Q8N6U8 529 aaKnown RBP18.07■□□□□ 0.48
ITSN1-209ENST00000399352 RNF113AO15541 343 aaKnown RBP18.07■□□□□ 0.48
ITSN1-209ENST00000399352 FOXO3O43524 673 aa18.07■□□□□ 0.48
ITSN1-209ENST00000399352 ACTN4O43707 911 aaKnown RBP18.07■□□□□ 0.48
ITSN1-209ENST00000399352 TSPYL6Q8N831 410 aa18.07■□□□□ 0.48
ITSN1-209ENST00000399352 MICAL1Q8TDZ2 1067 aa18.07■□□□□ 0.48
ITSN1-209ENST00000399352 LRRC45Q96CN5 670 aa18.07■□□□□ 0.48
ITSN1-209ENST00000399352 MKRN1Q9UHC7 482 aaKnown RBP18.07■□□□□ 0.48
ITSN1-209ENST00000399352 SECISBP2LQ93073 1101 aaKnown RBP18.06■□□□□ 0.48
ITSN1-209ENST00000399352 FAM212AQ96EL1 285 aa18.06■□□□□ 0.48
ITSN1-209ENST00000399352 UTP11Q9Y3A2 253 aaKnown RBP18.06■□□□□ 0.48
ITSN1-209ENST00000399352 A6NNZ2 444 aa18.06■□□□□ 0.48
ITSN1-209ENST00000399352 TUBB8Q3ZCM7 444 aa18.06■□□□□ 0.48
ITSN1-209ENST00000399352 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.06■□□□□ 0.48
ITSN1-209ENST00000399352 PLEKHA4Q9H4M7 779 aa18.06■□□□□ 0.48
ITSN1-209ENST00000399352 CLUL1Q15846 466 aa18.06■□□□□ 0.48
ITSN1-209ENST00000399352 KCNH3Q9ULD8 1083 aa18.06■□□□□ 0.48
ITSN1-209ENST00000399352 TXNDC9O14530 226 aa18.06■□□□□ 0.48
ITSN1-209ENST00000399352 IL15P40933 162 aaPredicted RBP18.06■□□□□ 0.48
ITSN1-209ENST00000399352 ATL3Q6DD88 541 aa18.06■□□□□ 0.48
ITSN1-209ENST00000399352 SMARCC2Q8TAQ2 1214 aa18.06■□□□□ 0.48
ITSN1-209ENST00000399352 CASQ2O14958 399 aaPredicted RBP18.05■□□□□ 0.48
ITSN1-209ENST00000399352 NAA16Q6N069 864 aaPredicted RBP18.05■□□□□ 0.48
ITSN1-209ENST00000399352 RUFY4Q6ZNE9 571 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 CAPN7Q9Y6W3 813 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 ARHGAP6O43182 974 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms