RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 PDILTQ8N807 584 aa17.73■□□□□ 0.43
MCF2L-205ENST00000397017 CAMTA2O94983 1202 aa17.73■□□□□ 0.43
MCF2L-205ENST00000397017 BAG3O95817 575 aa17.73■□□□□ 0.43
MCF2L-205ENST00000397017 XRCC6P12956 609 aaKnown RBP eCLIP17.73■□□□□ 0.43
MCF2L-205ENST00000397017 ADD1P35611 737 aaKnown RBP17.73■□□□□ 0.43
MCF2L-205ENST00000397017 FAM47AQ5JRC9 791 aa17.72■□□□□ 0.43
MCF2L-205ENST00000397017 ANKRD2Q9GZV1 360 aa17.72■□□□□ 0.43
MCF2L-205ENST00000397017 ADAMTSL3P82987 1691 aa17.72■□□□□ 0.43
MCF2L-205ENST00000397017 WTIPA6NIX2 430 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-205ENST00000397017 USP17L12C9JPN9 530 aa17.72■□□□□ 0.43
MCF2L-205ENST00000397017 USP17L21D6R901 530 aa17.72■□□□□ 0.43
MCF2L-205ENST00000397017 EIF6P56537 245 aaKnown RBP17.72■□□□□ 0.43
MCF2L-205ENST00000397017 SSRP1Q08945 709 aaKnown RBP17.72■□□□□ 0.43
MCF2L-205ENST00000397017 ZNF804AQ7Z570 1209 aa17.72■□□□□ 0.43
MCF2L-205ENST00000397017 ESR2Q92731 530 aa17.72■□□□□ 0.43
MCF2L-205ENST00000397017 BRMS1Q9HCU9 246 aa17.72■□□□□ 0.43
MCF2L-205ENST00000397017 DENND2AQ9ULE3 1009 aa17.72■□□□□ 0.43
MCF2L-205ENST00000397017 SCAND2PQ9GZW5 306 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-205ENST00000397017 DLG5Q8TDM6 1919 aa17.71■□□□□ 0.43
MCF2L-205ENST00000397017 IFIT1BQ5T764 474 aaKnown RBP17.71■□□□□ 0.43
MCF2L-205ENST00000397017 CATIPQ7Z7H3 387 aa17.71■□□□□ 0.43
MCF2L-205ENST00000397017 MAPKAPK5Q8IW41 473 aa17.71■□□□□ 0.43
MCF2L-205ENST00000397017 TRIM5Q9C035 493 aa17.71■□□□□ 0.43
MCF2L-205ENST00000397017 RIPOR2Q9Y4F9 1068 aa17.71■□□□□ 0.43
MCF2L-205ENST00000397017 GTF2IP78347 998 aa17.71■□□□□ 0.43
MCF2L-205ENST00000397017 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.43
MCF2L-205ENST00000397017 GGA1Q9UJY5 639 aa17.71■□□□□ 0.43
MCF2L-205ENST00000397017 CHD2O14647 1828 aaKnown RBP17.71■□□□□ 0.43
MCF2L-205ENST00000397017 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
MCF2L-205ENST00000397017 FSIP1Q8NA03 581 aa17.7■□□□□ 0.42
MCF2L-205ENST00000397017 LCORLQ8N3X6 602 aa17.7■□□□□ 0.42
MCF2L-205ENST00000397017 DACT1Q9NYF0 836 aa17.7■□□□□ 0.42
MCF2L-205ENST00000397017 DIXDC1Q155Q3 683 aa17.7■□□□□ 0.42
MCF2L-205ENST00000397017 RTN1Q16799 776 aa17.7■□□□□ 0.42
MCF2L-205ENST00000397017 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
MCF2L-205ENST00000397017 GPR108Q9NPR9 543 aa17.7■□□□□ 0.42
MCF2L-205ENST00000397017 GJB4Q9NTQ9 266 aa17.7■□□□□ 0.42
MCF2L-205ENST00000397017 NARFQ9UHQ1 456 aa17.7■□□□□ 0.42
MCF2L-205ENST00000397017 PDE4BQ07343 736 aa17.69■□□□□ 0.42
MCF2L-205ENST00000397017 SPTY2D1Q68D10 685 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-205ENST00000397017 ZNF804BA4D1E1 1349 aa17.69■□□□□ 0.42
MCF2L-205ENST00000397017 GOLGA6L6A8MZA4 724 aa17.69■□□□□ 0.42
MCF2L-205ENST00000397017 ZNF34Q8IZ26 560 aa17.69■□□□□ 0.42
MCF2L-205ENST00000397017 USP25Q9UHP3 1055 aa17.69■□□□□ 0.42
MCF2L-205ENST00000397017 LDHCP07864 332 aa17.69■□□□□ 0.42
MCF2L-205ENST00000397017 CCDC192P0DO97 292 aa17.69■□□□□ 0.42
MCF2L-205ENST00000397017 NFIXQ14938 502 aa17.69■□□□□ 0.42
MCF2L-205ENST00000397017 TGFBRAP1Q8WUH2 860 aa17.69■□□□□ 0.42
MCF2L-205ENST00000397017 RBM17Q96I25 401 aaKnown RBP17.69■□□□□ 0.42
MCF2L-205ENST00000397017 BRD1O95696 1058 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 TSPY3P0CV98 308 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 TSPY8P0CW00 308 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 SCNN1DP51172 638 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 TPD52L1Q16890 204 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-205ENST00000397017 TM6SF1Q9BZW5 370 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 KRT23Q9C075 422 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 MINPP1Q9UNW1 487 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 RBM26Q5T8P6 1007 aaKnown RBP17.68■□□□□ 0.42
MCF2L-205ENST00000397017 ERCC4Q92889 916 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-205ENST00000397017 CCDC34Q96HJ3 373 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 ANGEL1Q9UNK9 670 aaKnown RBP17.68■□□□□ 0.42
MCF2L-205ENST00000397017 UTYO14607 1347 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 ADD2P35612 726 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 MAP3K11Q16584 847 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 LMBRD1Q9NUN5 540 aa17.68■□□□□ 0.42
MCF2L-205ENST00000397017 MED1Q15648 1581 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-205ENST00000397017 A0A0U1RQG5 324 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-205ENST00000397017 PRDX5P30044 214 aa17.67■□□□□ 0.42
MCF2L-205ENST00000397017 MFSD14BQ5SR56 506 aa17.67■□□□□ 0.42
MCF2L-205ENST00000397017 RXRBP28702 533 aa17.67■□□□□ 0.42
MCF2L-205ENST00000397017 UBE2HP62256 183 aa17.67■□□□□ 0.42
MCF2L-205ENST00000397017 SCRN1Q12765 414 aa17.67■□□□□ 0.42
MCF2L-205ENST00000397017 TCP10Q12799 353 aa17.67■□□□□ 0.42
MCF2L-205ENST00000397017 CDK11BP21127 795 aaKnown RBP17.67■□□□□ 0.42
MCF2L-205ENST00000397017 CASP7P55210 303 aa17.67■□□□□ 0.42
MCF2L-205ENST00000397017 DHX8Q14562 1220 aaKnown RBP17.67■□□□□ 0.42
MCF2L-205ENST00000397017 KAT14Q9H8E8 782 aa17.67■□□□□ 0.42
MCF2L-205ENST00000397017 SALL3Q9BXA9 1300 aa17.67■□□□□ 0.42
MCF2L-205ENST00000397017 CCDC183Q5T5S1 534 aa17.66■□□□□ 0.42
MCF2L-205ENST00000397017 DPP8Q6V1X1 898 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-205ENST00000397017 CCAR1Q8IX12 1150 aaKnown RBP17.66■□□□□ 0.42
MCF2L-205ENST00000397017 TEX11Q8IYF3 940 aa17.66■□□□□ 0.42
MCF2L-205ENST00000397017 CCDC196A0A1B0GTZ2 297 aa17.66■□□□□ 0.42
MCF2L-205ENST00000397017 NLRP5P59047 1200 aa17.66■□□□□ 0.42
MCF2L-205ENST00000397017 TPM4P67936 248 aa17.66■□□□□ 0.42
MCF2L-205ENST00000397017 CCDC96Q2M329 555 aa17.66■□□□□ 0.42
MCF2L-205ENST00000397017 C3orf67Q6ZVT6 689 aa17.66■□□□□ 0.42
MCF2L-205ENST00000397017 FBXO3Q9UK99 471 aa17.66■□□□□ 0.42
MCF2L-205ENST00000397017 LTN1O94822 1766 aa17.66■□□□□ 0.42
MCF2L-205ENST00000397017 PATL2C9JE40 543 aaKnown RBP17.66■□□□□ 0.42
MCF2L-205ENST00000397017 MMP10P09238 476 aa17.66■□□□□ 0.42
MCF2L-205ENST00000397017 TXNRD1Q16881 649 aa17.66■□□□□ 0.42
MCF2L-205ENST00000397017 FTOQ9C0B1 505 aaKnown RBP eCLIP17.66■□□□□ 0.42
MCF2L-205ENST00000397017 CLEC4GQ6UXB4 293 aa17.65■□□□□ 0.42
MCF2L-205ENST00000397017 BARGINQ6ZT62 677 aa17.65■□□□□ 0.42
MCF2L-205ENST00000397017 GTF3C6Q969F1 213 aa17.65■□□□□ 0.42
MCF2L-205ENST00000397017 CSF1RP07333 972 aa17.65■□□□□ 0.42
MCF2L-205ENST00000397017 CNNM2Q9H8M5 875 aa17.65■□□□□ 0.42
MCF2L-205ENST00000397017 TMEM63CQ9P1W3 806 aa17.65■□□□□ 0.42
MCF2L-205ENST00000397017 MTMR6Q9Y217 621 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms