RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 PDS5AQ29RF7 1337 aaKnown RBP20.31■□□□□ 0.84
SCNN1A-205ENST00000396966 COL1A1P02452 1464 aaPredicted RBP20.3■□□□□ 0.84
SCNN1A-205ENST00000396966 NASPP49321 788 aaPredicted RBP20.3■□□□□ 0.84
SCNN1A-205ENST00000396966 FOXD4L6Q3SYB3 417 aaPredicted RBP20.3■□□□□ 0.84
SCNN1A-205ENST00000396966 FOXD4L3Q6VB84 417 aaPredicted RBP20.3■□□□□ 0.84
SCNN1A-205ENST00000396966 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.3■□□□□ 0.84
SCNN1A-205ENST00000396966 KLRK1P26718 216 aa20.3■□□□□ 0.84
SCNN1A-205ENST00000396966 ZNF445P59923 1031 aa20.3■□□□□ 0.84
SCNN1A-205ENST00000396966 ANO8Q9HCE9 1232 aaPredicted RBP20.3■□□□□ 0.84
SCNN1A-205ENST00000396966 RAI14Q9P0K7 980 aa20.3■□□□□ 0.84
SCNN1A-205ENST00000396966 A0A0G2JLW4 131 aa20.29■□□□□ 0.84
SCNN1A-205ENST00000396966 MBD4O95243 580 aa20.29■□□□□ 0.84
SCNN1A-205ENST00000396966 GNAT2P19087 354 aa20.29■□□□□ 0.84
SCNN1A-205ENST00000396966 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
SCNN1A-205ENST00000396966 NSFL1CQ9UNZ2 370 aaKnown RBP20.29■□□□□ 0.84
SCNN1A-205ENST00000396966 CACNA1SQ13698 1873 aa20.29■□□□□ 0.84
SCNN1A-205ENST00000396966 PATL2C9JE40 543 aaKnown RBP20.28■□□□□ 0.84
SCNN1A-205ENST00000396966 BBOX1O75936 387 aa20.28■□□□□ 0.84
SCNN1A-205ENST00000396966 HOXA10P31260 410 aaPredicted RBP20.28■□□□□ 0.84
SCNN1A-205ENST00000396966 HAND2P61296 217 aa20.28■□□□□ 0.84
SCNN1A-205ENST00000396966 MAST2Q6P0Q8 1798 aa20.28■□□□□ 0.84
SCNN1A-205ENST00000396966 KLRG2A4D1S0 409 aaPredicted RBP20.28■□□□□ 0.84
SCNN1A-205ENST00000396966 ZBTB22O15209 634 aa20.28■□□□□ 0.84
SCNN1A-205ENST00000396966 CRAMP1Q96RY5 1269 aa20.28■□□□□ 0.84
SCNN1A-205ENST00000396966 ZMYM6O95789 1325 aa20.27■□□□□ 0.84
SCNN1A-205ENST00000396966 PNPLA7Q6ZV29 1317 aa20.27■□□□□ 0.84
SCNN1A-205ENST00000396966 CYP7A1P22680 504 aa20.27■□□□□ 0.84
SCNN1A-205ENST00000396966 ALX1Q15699 326 aa20.27■□□□□ 0.84
SCNN1A-205ENST00000396966 TRIM44Q96DX7 344 aaPredicted RBP20.27■□□□□ 0.84
SCNN1A-205ENST00000396966 EXOSC10Q01780 885 aaKnown RBP20.27■□□□□ 0.84
SCNN1A-205ENST00000396966 BRIP1Q9BX63 1249 aa20.27■□□□□ 0.84
SCNN1A-205ENST00000396966 ARMT1Q9H993 441 aa20.27■□□□□ 0.84
SCNN1A-205ENST00000396966 PARP3Q9Y6F1 533 aa20.27■□□□□ 0.84
SCNN1A-205ENST00000396966 WDR33Q9C0J8 1336 aaKnown RBP20.26■□□□□ 0.83
SCNN1A-205ENST00000396966 IRS2Q9Y4H2 1338 aa20.26■□□□□ 0.83
SCNN1A-205ENST00000396966 NECAB1Q8N987 351 aa20.26■□□□□ 0.83
SCNN1A-205ENST00000396966 NCOA7Q8NI08 942 aa20.26■□□□□ 0.83
SCNN1A-205ENST00000396966 LRRC37AA6NMS7 1700 aa20.26■□□□□ 0.83
SCNN1A-205ENST00000396966 QSER1Q2KHR3 1735 aa20.26■□□□□ 0.83
SCNN1A-205ENST00000396966 TMC4Q7Z404 712 aa20.26■□□□□ 0.83
SCNN1A-205ENST00000396966 RALYLQ86SE5 291 aaKnown RBP20.26■□□□□ 0.83
SCNN1A-205ENST00000396966 TMEM63CQ9P1W3 806 aa20.26■□□□□ 0.83
SCNN1A-205ENST00000396966 ATP2B4P23634 1241 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 IFNL3Q8IZI9 196 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 BRF1Q92994 677 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 NACAP1Q9BZK3 213 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 NAPBQ9H115 298 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 KIAA1551Q9HCM1 1747 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 GJB2P29033 226 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 TRDNQ13061 729 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 ZNF804AQ7Z570 1209 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 TXNRD3Q86VQ6 643 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 LRRC2Q9BYS8 371 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 AGXT2Q9BYV1 514 aa20.25■□□□□ 0.83
SCNN1A-205ENST00000396966 TCHHQ07283 1943 aa20.24■□□□□ 0.83
SCNN1A-205ENST00000396966 GPSM2P81274 684 aa20.24■□□□□ 0.83
SCNN1A-205ENST00000396966 ST3GAL1Q11201 340 aa20.24■□□□□ 0.83
SCNN1A-205ENST00000396966 NAA16Q6N069 864 aaPredicted RBP20.24■□□□□ 0.83
SCNN1A-205ENST00000396966 C15orf52Q6ZUT6 534 aaKnown RBP20.24■□□□□ 0.83
SCNN1A-205ENST00000396966 LCORLQ8N3X6 602 aa20.24■□□□□ 0.83
SCNN1A-205ENST00000396966 SLC4A4Q9Y6R1 1079 aa20.24■□□□□ 0.83
SCNN1A-205ENST00000396966 MAGEB6P1A0A0J9YX57 407 aa20.24■□□□□ 0.83
SCNN1A-205ENST00000396966 MCM5P33992 734 aa20.24■□□□□ 0.83
SCNN1A-205ENST00000396966 CHAF1AQ13111 956 aaPredicted RBP20.24■□□□□ 0.83
SCNN1A-205ENST00000396966 GDPD2Q9HCC8 539 aa20.24■□□□□ 0.83
SCNN1A-205ENST00000396966 MMP10P09238 476 aa20.23■□□□□ 0.83
SCNN1A-205ENST00000396966 STK3Q13188 491 aa20.23■□□□□ 0.83
SCNN1A-205ENST00000396966 TMED8Q6PL24 325 aaPredicted RBP20.23■□□□□ 0.83
SCNN1A-205ENST00000396966 MIGA1Q8NAN2 632 aa20.23■□□□□ 0.83
SCNN1A-205ENST00000396966 ANP32BQ92688 251 aaKnown RBP20.23■□□□□ 0.83
SCNN1A-205ENST00000396966 RBSNQ9H1K0 784 aa20.23■□□□□ 0.83
SCNN1A-205ENST00000396966 GGA1Q9UJY5 639 aa20.23■□□□□ 0.83
SCNN1A-205ENST00000396966 PDIA4P13667 645 aaKnown RBP20.22■□□□□ 0.83
SCNN1A-205ENST00000396966 PDE6BP35913 854 aa20.22■□□□□ 0.83
SCNN1A-205ENST00000396966 SPTY2D1Q68D10 685 aaPredicted RBP20.22■□□□□ 0.83
SCNN1A-205ENST00000396966 FBXL16Q8N461 479 aa20.22■□□□□ 0.83
SCNN1A-205ENST00000396966 SYCE3A1L190 88 aa20.22■□□□□ 0.83
SCNN1A-205ENST00000396966 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
SCNN1A-205ENST00000396966 ESPNB1AK53 854 aa20.22■□□□□ 0.83
SCNN1A-205ENST00000396966 UFL1O94874 794 aa20.22■□□□□ 0.83
SCNN1A-205ENST00000396966 EZH2Q15910 746 aaKnown RBP20.22■□□□□ 0.83
SCNN1A-205ENST00000396966 GTF3C6Q969F1 213 aa20.22■□□□□ 0.83
SCNN1A-205ENST00000396966 WDR19Q8NEZ3 1342 aa20.22■□□□□ 0.83
SCNN1A-205ENST00000396966 TIAM2Q8IVF5 1701 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 STX6O43752 255 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 DTNBO60941 627 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 IGSF3O75054 1194 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 TDO2P48775 406 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 CCDC173Q0VFZ6 552 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 MB21D2Q8IYB1 491 aaPredicted RBP20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 CAMKK2Q96RR4 588 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 EPB41L4AQ9HCS5 686 aaPredicted RBP20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 STK32BQ9NY57 414 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 PODXL2Q9NZ53 605 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 COL11A2P13942 1736 aaPredicted RBP20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 PPEF1O14829 653 aaPredicted RBP20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 MBD3O95983 291 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 NPR1P16066 1061 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 SYT1P21579 422 aa20.21■□□□□ 0.83
SCNN1A-205ENST00000396966 CLCN1P35523 988 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms