RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PLEKHM2Q8IWE5 1019 aa17.71■□□□□ 0.42
GNE-202ENST00000396594 DSCC1Q9BVC3 393 aa17.71■□□□□ 0.42
GNE-202ENST00000396594 ZBTB7BO15156 539 aaPredicted RBP17.7■□□□□ 0.42
GNE-202ENST00000396594 MAGEB6Q8N7X4 407 aa17.7■□□□□ 0.42
GNE-202ENST00000396594 ARHGAP31Q2M1Z3 1444 aa17.7■□□□□ 0.42
GNE-202ENST00000396594 PCDHB15Q9Y5E8 787 aa17.7■□□□□ 0.42
GNE-202ENST00000396594 RNF123Q5XPI4 1314 aa17.7■□□□□ 0.42
GNE-202ENST00000396594 ASIC1P78348 528 aa17.7■□□□□ 0.42
GNE-202ENST00000396594 TFCP2Q12800 502 aa17.7■□□□□ 0.42
GNE-202ENST00000396594 CDAN1Q8IWY9 1227 aa17.7■□□□□ 0.42
GNE-202ENST00000396594 BTG4Q9NY30 223 aa17.7■□□□□ 0.42
GNE-202ENST00000396594 KIF1BO60333 1816 aa17.7■□□□□ 0.42
GNE-202ENST00000396594 ADCY5O95622 1261 aa17.69■□□□□ 0.42
GNE-202ENST00000396594 SLC39A6Q13433 755 aa17.69■□□□□ 0.42
GNE-202ENST00000396594 GALNT17Q6IS24 598 aa17.69■□□□□ 0.42
GNE-202ENST00000396594 CROCCP2Q86T23 111 aa17.69■□□□□ 0.42
GNE-202ENST00000396594 FAM177A1Q8N128 213 aaPredicted RBP17.69■□□□□ 0.42
GNE-202ENST00000396594 CNGA4Q8IV77 575 aa17.69■□□□□ 0.42
GNE-202ENST00000396594 MBD5Q9P267 1494 aa17.69■□□□□ 0.42
GNE-202ENST00000396594 STX10O60499 249 aa17.69■□□□□ 0.42
GNE-202ENST00000396594 BMS1Q14692 1282 aaKnown RBP17.69■□□□□ 0.42
GNE-202ENST00000396594 NSRP1Q9H0G5 558 aaKnown RBP17.69■□□□□ 0.42
GNE-202ENST00000396594 NAP1L3Q99457 506 aaPredicted RBP17.69■□□□□ 0.42
GNE-202ENST00000396594 CCDC94Q9BW85 323 aaPredicted RBP17.69■□□□□ 0.42
GNE-202ENST00000396594 BICC1Q9H694 974 aaKnown RBP17.69■□□□□ 0.42
GNE-202ENST00000396594 GPR108Q9NPR9 543 aa17.69■□□□□ 0.42
GNE-202ENST00000396594 ARPP21Q9UBL0 812 aaPredicted RBP17.69■□□□□ 0.42
GNE-202ENST00000396594 TET3O43151 1660 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 RPS6KB1P23443 525 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 VSIG10Q8N0Z9 540 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 VAT1LQ9HCJ6 419 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 NPHP4O75161 1426 aaPredicted RBP17.68■□□□□ 0.42
GNE-202ENST00000396594 ATP10DQ9P241 1426 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 RAB3GAP1Q15042 981 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 ZSCAN23Q3MJ62 389 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 CNNM4Q6P4Q7 775 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 PHACTR2O75167 634 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 CCDC175P0C221 793 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 TNFAIP1Q13829 316 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 TEX11Q8IYF3 940 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 NUP58Q9BVL2 599 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 KBTBD3Q8NAB2 608 aa17.68■□□□□ 0.42
GNE-202ENST00000396594 GNPATO15228 680 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 CKAP2LQ8IYA6 745 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 TTC14Q96N46 770 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 CSRNP2Q9H175 543 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 DYNC1I1O14576 645 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 CENPHQ9H3R5 247 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 IKBKGQ9Y6K9 419 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 ADCY10Q96PN6 1610 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 EIF6P56537 245 aaKnown RBP17.67■□□□□ 0.42
GNE-202ENST00000396594 NCAPD2Q15021 1401 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 PPM1EQ8WY54 764 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 PICK1Q9NRD5 415 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 SSX2IPQ9Y2D8 614 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 TMCO5BA8MYB1 307 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 OPA1O60313 960 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 SV2BQ7L1I2 683 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 HAUS2Q9NVX0 235 aa17.67■□□□□ 0.42
GNE-202ENST00000396594 PTPDC1A2A3K4 754 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 H0YIN7 160 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 ITGA6P23229 1130 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 KIFAP3Q92845 792 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 NUCKS1Q9H1E3 243 aaKnown RBP17.66■□□□□ 0.42
GNE-202ENST00000396594 SMTNP53814 917 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 GCKRQ14397 625 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 FCHSD1Q86WN1 690 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 C16orf71Q8IYS4 520 aaPredicted RBP17.66■□□□□ 0.42
GNE-202ENST00000396594 NEK11Q8NG66 645 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 GABPB2Q8TAK5 448 aaPredicted RBP17.66■□□□□ 0.42
GNE-202ENST00000396594 CUTAO60888 179 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 CCDC82Q8N4S0 544 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 IWS1Q96ST2 819 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 USP26Q9BXU7 913 aa17.66■□□□□ 0.42
GNE-202ENST00000396594 NSFL1CQ9UNZ2 370 aaKnown RBP17.66■□□□□ 0.42
GNE-202ENST00000396594 ANGEL1Q9UNK9 670 aaKnown RBP17.66■□□□□ 0.42
GNE-202ENST00000396594 FERP16591 822 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 NOP2P46087 812 aaKnown RBP17.65■□□□□ 0.42
GNE-202ENST00000396594 MAGI3Q5TCQ9 1506 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 CTAGE15A4D2H0 777 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 A6NNZ2 444 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 CTAGE8P0CG41 777 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 ATP5JP18859 108 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 TUBB8Q3ZCM7 444 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 CTAGE6Q86UF2 777 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 CTAGE4Q8IX94 777 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 ACSBG1Q96GR2 724 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 AS3MTQ9HBK9 375 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 GOPCQ9HD26 462 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 A0A1B0GUL7 405 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 H0YCG3 227 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 HSF2BPO75031 334 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 ATP2B4P23634 1241 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 CCDC14Q49A88 953 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 C6orf163Q5TEZ5 329 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 SLAIN2Q9P270 581 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 UGGT1Q9NYU2 1555 aa17.65■□□□□ 0.42
GNE-202ENST00000396594 CALUO43852 315 aaPredicted RBP17.65■□□□□ 0.42
GNE-202ENST00000396594 SYNCQ9H7C4 482 aa17.64■□□□□ 0.42
GNE-202ENST00000396594 FAM160A1Q05DH4 1040 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms