RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 PPEF1O14829 653 aaPredicted RBP12.12□□□□□ -0.47
TUBB-208ENST00000396389 FKBP4Q02790 459 aaKnown RBP eCLIP12.12□□□□□ -0.47
TUBB-208ENST00000396389 CHAF1AQ13111 956 aaPredicted RBP12.12□□□□□ -0.47
TUBB-208ENST00000396389 UVSSAQ2YD98 709 aa12.12□□□□□ -0.47
TUBB-208ENST00000396389 FBXW7Q969H0 707 aa12.12□□□□□ -0.47
TUBB-208ENST00000396389 TNRC6CQ9HCJ0 1690 aaKnown RBP12.12□□□□□ -0.47
TUBB-208ENST00000396389 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.12□□□□□ -0.47
TUBB-208ENST00000396389 GPSM2P81274 684 aa12.12□□□□□ -0.47
TUBB-208ENST00000396389 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
TUBB-208ENST00000396389 UFL1O94874 794 aa12.11□□□□□ -0.47
TUBB-208ENST00000396389 PDE8BO95263 885 aa12.11□□□□□ -0.47
TUBB-208ENST00000396389 CRY2Q49AN0 593 aa12.11□□□□□ -0.47
TUBB-208ENST00000396389 HSP90AB4PQ58FF6 505 aa12.11□□□□□ -0.47
TUBB-208ENST00000396389 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
TUBB-208ENST00000396389 FAM184AQ8NB25 1140 aa12.11□□□□□ -0.47
TUBB-208ENST00000396389 ZNF592Q92610 1267 aa12.11□□□□□ -0.47
TUBB-208ENST00000396389 XAGE2Q96GT9 111 aa12.11□□□□□ -0.47
TUBB-208ENST00000396389 MASTLQ96GX5 879 aa12.11□□□□□ -0.47
TUBB-208ENST00000396389 PCNTO95613 3336 aa12.11□□□□□ -0.47
TUBB-208ENST00000396389 DNM1Q05193 864 aaKnown RBP12.11□□□□□ -0.47
TUBB-208ENST00000396389 DIAPH3Q9NSV4 1193 aa12.11□□□□□ -0.47
TUBB-208ENST00000396389 BSDC1Q9NW68 430 aaPredicted RBP12.11□□□□□ -0.47
TUBB-208ENST00000396389 SOCS7O14512 581 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 PHKA1P46020 1223 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 SCARF1Q14162 830 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 LUZP1Q86V48 1076 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 ANKRD36CQ5JPF3 1778 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 WDR33Q9C0J8 1336 aaKnown RBP12.1□□□□□ -0.47
TUBB-208ENST00000396389 RAB11FIP3O75154 756 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 NPR1P16066 1061 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 CHMLP26374 656 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 CCDC186Q7Z3E2 898 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 TRERF1Q96PN7 1200 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 HMGB1P09429 215 aaKnown RBP12.1□□□□□ -0.47
TUBB-208ENST00000396389 SYT1P21579 422 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 ERC1Q8IUD2 1116 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 ST7Q9NRC1 585 aa12.1□□□□□ -0.47
TUBB-208ENST00000396389 ERICH4A6NGS2 130 aa12.09□□□□□ -0.47
TUBB-208ENST00000396389 KCNA3P22001 575 aa12.09□□□□□ -0.47
TUBB-208ENST00000396389 DRC7Q8IY82 874 aa12.09□□□□□ -0.47
TUBB-208ENST00000396389 CKAP2LQ8IYA6 745 aa12.09□□□□□ -0.47
TUBB-208ENST00000396389 SGIP1Q9BQI5 828 aa12.09□□□□□ -0.47
TUBB-208ENST00000396389 POLLQ9UGP5 575 aa12.09□□□□□ -0.47
TUBB-208ENST00000396389 RPAP1Q9BWH6 1393 aaPredicted RBP12.09□□□□□ -0.47
TUBB-208ENST00000396389 INTS4Q96HW7 963 aaKnown RBP12.09□□□□□ -0.47
TUBB-208ENST00000396389 CTNNA3Q9UI47 895 aa12.09□□□□□ -0.47
TUBB-208ENST00000396389 RIC1Q4ADV7 1423 aa12.09□□□□□ -0.47
TUBB-208ENST00000396389 CTIFO43310 598 aaKnown RBP12.08□□□□□ -0.48
TUBB-208ENST00000396389 LARGE1O95461 756 aa12.08□□□□□ -0.48
TUBB-208ENST00000396389 ZSCAN22P10073 491 aaPredicted RBP12.08□□□□□ -0.48
TUBB-208ENST00000396389 TTC39AQ5SRH9 613 aa12.08□□□□□ -0.48
TUBB-208ENST00000396389 VGLL2Q8N8G2 317 aa12.08□□□□□ -0.48
TUBB-208ENST00000396389 FUCA2Q9BTY2 467 aa12.08□□□□□ -0.48
TUBB-208ENST00000396389 TMX4Q9H1E5 349 aaPredicted RBP12.08□□□□□ -0.48
TUBB-208ENST00000396389 MCCP23508 829 aa12.08□□□□□ -0.48
TUBB-208ENST00000396389 PUM3Q15397 648 aaKnown RBP12.08□□□□□ -0.48
TUBB-208ENST00000396389 WASHC4Q2M389 1173 aa12.08□□□□□ -0.48
TUBB-208ENST00000396389 DPP8Q6V1X1 898 aaPredicted RBP12.08□□□□□ -0.48
TUBB-208ENST00000396389 TTLL6Q8N841 843 aa12.08□□□□□ -0.48
TUBB-208ENST00000396389 DBNDD1Q9H9R9 158 aa12.08□□□□□ -0.48
TUBB-208ENST00000396389 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.08□□□□□ -0.48
TUBB-208ENST00000396389 GOLIM4O00461 696 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 STX6O43752 255 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 SLFN14P0C7P3 912 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 MCM2P49736 904 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 UBE2HP62256 183 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 FERMT3Q86UX7 667 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 TICAM2Q86XR7 235 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 ZNF277Q9NRM2 450 aaPredicted RBP12.07□□□□□ -0.48
TUBB-208ENST00000396389 OGFRQ9NZT2 677 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 DDX60Q8IY21 1712 aaKnown RBP12.07□□□□□ -0.48
TUBB-208ENST00000396389 ZNF804BA4D1E1 1349 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 CIAO1O76071 339 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 TNNT1P13805 278 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 ALDH1B1P30837 517 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 CCDC102BQ68D86 513 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 ECHDC1Q9NTX5 307 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 MROH5Q6ZUA9 1318 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
TUBB-208ENST00000396389 RGPD4Q7Z3J3 1758 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 RGL2O15211 777 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 MXD3Q9BW11 206 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 RNF216Q9NWF9 866 aaPredicted RBP12.07□□□□□ -0.48
TUBB-208ENST00000396389 ABCF2Q9UG63 623 aa12.07□□□□□ -0.48
TUBB-208ENST00000396389 G3V3G9 751 aa12.06□□□□□ -0.48
TUBB-208ENST00000396389 AK2P54819 239 aa12.06□□□□□ -0.48
TUBB-208ENST00000396389 ARID5BQ14865 1188 aa12.06□□□□□ -0.48
TUBB-208ENST00000396389 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
TUBB-208ENST00000396389 CCDC83Q8IWF9 413 aa12.06□□□□□ -0.48
TUBB-208ENST00000396389 SYT17Q9BSW7 474 aa12.06□□□□□ -0.48
TUBB-208ENST00000396389 PIM2Q9P1W9 311 aa12.06□□□□□ -0.48
TUBB-208ENST00000396389 VPS37CA5D8V6 355 aaPredicted RBP12.06□□□□□ -0.48
TUBB-208ENST00000396389 F8W031 263 aaPredicted RBP12.06□□□□□ -0.48
TUBB-208ENST00000396389 BBOX1O75936 387 aa12.06□□□□□ -0.48
TUBB-208ENST00000396389 IFIT1P09914 478 aaKnown RBP12.06□□□□□ -0.48
TUBB-208ENST00000396389 SLC5A1P13866 664 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms