RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 VASH1Q7L8A9 365 aaPredicted RBP8□□□□□ -1.13
PTPN20-208ENST00000395727 NBPF5PQ86XG9 351 aaPredicted RBP8□□□□□ -1.13
PTPN20-208ENST00000395727 ZNF592Q92610 1267 aa8□□□□□ -1.13
PTPN20-208ENST00000395727 MASTLQ96GX5 879 aa8□□□□□ -1.13
PTPN20-208ENST00000395727 NYXQ9GZU5 481 aa8□□□□□ -1.13
PTPN20-208ENST00000395727 RNF181Q9P0P0 153 aa8□□□□□ -1.13
PTPN20-208ENST00000395727 ADAMTS8Q9UP79 889 aa8□□□□□ -1.13
PTPN20-208ENST00000395727 NIP7Q9Y221 180 aaKnown RBP eCLIP8□□□□□ -1.13
PTPN20-208ENST00000395727 PCDHB9Q9Y5E1 797 aa8□□□□□ -1.13
PTPN20-208ENST00000395727 POM121CA8CG34 1229 aa7.99□□□□□ -1.13
PTPN20-208ENST00000395727 ESPNB1AK53 854 aa7.99□□□□□ -1.13
PTPN20-208ENST00000395727 TRAK2O60296 914 aa7.99□□□□□ -1.13
PTPN20-208ENST00000395727 TOMM70O94826 608 aa7.99□□□□□ -1.13
PTPN20-208ENST00000395727 SOX11P35716 441 aa7.99□□□□□ -1.13
PTPN20-208ENST00000395727 HLFQ16534 295 aa7.99□□□□□ -1.13
PTPN20-208ENST00000395727 PRPF40BQ6NWY9 871 aaKnown RBP7.99□□□□□ -1.13
PTPN20-208ENST00000395727 KIF6Q6ZMV9 814 aa7.99□□□□□ -1.13
PTPN20-208ENST00000395727 ZNF34Q8IZ26 560 aa7.99□□□□□ -1.13
PTPN20-208ENST00000395727 C7orf43Q8WVR3 580 aa7.99□□□□□ -1.13
PTPN20-208ENST00000395727 KCTD15Q96SI1 283 aaPredicted RBP7.99□□□□□ -1.13
PTPN20-208ENST00000395727 SLX4Q8IY92 1834 aa7.99□□□□□ -1.13
PTPN20-208ENST00000395727 CACNA1SQ13698 1873 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 SENP3-EIF4A1A0A087X0R7 540 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 NPHP1O15259 732 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 ZNF853P0CG23 659 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 HSPA6P17066 643 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 PRELPP51888 382 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 CALD1Q05682 793 aaKnown RBP7.98□□□□□ -1.13
PTPN20-208ENST00000395727 NR5A1Q13285 461 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 NBPF20Q3BBV1 942 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 PARP10Q53GL7 1025 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 TTLL7Q6ZT98 887 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 ALG2Q9H553 416 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 DDX21Q9NR30 783 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTPN20-208ENST00000395727 UBN2Q6ZU65 1347 aa7.98□□□□□ -1.13
PTPN20-208ENST00000395727 ABCC12Q96J65 1359 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 GLTPD2A6NH11 291 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 DGAT1O75907 488 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 NTSR2O95665 410 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 NR3C2P08235 984 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 ALDH1B1P30837 517 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 HOXA10P31260 410 aaPredicted RBP7.97□□□□□ -1.13
PTPN20-208ENST00000395727 RASSF7Q02833 373 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 FSTL1Q12841 308 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 CCDC93Q567U6 631 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 HSP90AB3PQ58FF7 597 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 CC2D2BQ6DHV5 1058 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 CCDC146Q8IYE0 955 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 ADAMTS19Q8TE59 1207 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 ZNF526Q8TF50 670 aaPredicted RBP7.97□□□□□ -1.13
PTPN20-208ENST00000395727 ZNF622Q969S3 477 aaKnown RBP eCLIP7.97□□□□□ -1.13
PTPN20-208ENST00000395727 IFT57Q9NWB7 429 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 CEP126Q9P2H0 1117 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 RRP7AQ9Y3A4 280 aaKnown RBP7.97□□□□□ -1.13
PTPN20-208ENST00000395727 WASF2Q9Y6W5 498 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 LAMB2P55268 1798 aa7.97□□□□□ -1.13
PTPN20-208ENST00000395727 CCDC88AQ3V6T2 1871 aa7.96□□□□□ -1.13
PTPN20-208ENST00000395727 FAM187AA6NFU0 413 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 C21orf2O43822 256 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 AVPP01185 164 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 MYL6BP14649 208 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 FSHRP23945 695 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 NNTQ13423 1086 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 CCDC27Q2M243 656 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 INTS6LQ5JSJ4 861 aaKnown RBP7.96□□□□□ -1.14
PTPN20-208ENST00000395727 SLC10A5Q5PT55 438 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 ERICH6Q7L0X2 663 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 PPP1R42Q7Z4L9 355 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 CHMP4AQ9BY43 222 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 TAOK3Q9H2K8 898 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 NMRK2Q9NPI5 230 aa7.96□□□□□ -1.14
PTPN20-208ENST00000395727 LRRC37AA6NMS7 1700 aa7.95□□□□□ -1.14
PTPN20-208ENST00000395727 GNAI1P63096 354 aa7.95□□□□□ -1.14
PTPN20-208ENST00000395727 FKBP4Q02790 459 aaKnown RBP eCLIP7.95□□□□□ -1.14
PTPN20-208ENST00000395727 SUSD4Q5VX71 490 aa7.95□□□□□ -1.14
PTPN20-208ENST00000395727 RTKN2Q8IZC4 609 aa7.95□□□□□ -1.14
PTPN20-208ENST00000395727 HPS1Q92902 700 aa7.95□□□□□ -1.14
PTPN20-208ENST00000395727 CRAMP1Q96RY5 1269 aa7.95□□□□□ -1.14
PTPN20-208ENST00000395727 PSMD1Q99460 953 aa7.95□□□□□ -1.14
PTPN20-208ENST00000395727 KLF16Q9BXK1 252 aaPredicted RBP7.95□□□□□ -1.14
PTPN20-208ENST00000395727 DBF4Q9UBU7 674 aaPredicted RBP7.95□□□□□ -1.14
PTPN20-208ENST00000395727 SCN4AP35499 1836 aa7.94□□□□□ -1.14
PTPN20-208ENST00000395727 APAF1O14727 1248 aa7.94□□□□□ -1.14
PTPN20-208ENST00000395727 VEGFAP15692 232 aaPredicted RBP7.94□□□□□ -1.14
PTPN20-208ENST00000395727 EIF2S2P20042 333 aaKnown RBP7.94□□□□□ -1.14
PTPN20-208ENST00000395727 GTF2E1P29083 439 aaPredicted RBP7.94□□□□□ -1.14
PTPN20-208ENST00000395727 TRIM28Q13263 835 aaKnown RBP7.94□□□□□ -1.14
PTPN20-208ENST00000395727 SEMA3FQ13275 785 aa7.94□□□□□ -1.14
PTPN20-208ENST00000395727 PROSER3Q2NL68 480 aa7.94□□□□□ -1.14
PTPN20-208ENST00000395727 HDGFL1Q5TGJ6 251 aa7.94□□□□□ -1.14
PTPN20-208ENST00000395727 PHTF2Q8N3S3 785 aa7.94□□□□□ -1.14
PTPN20-208ENST00000395727 PLBD2Q8NHP8 589 aa7.94□□□□□ -1.14
PTPN20-208ENST00000395727 MBIPQ9NS73 344 aa7.94□□□□□ -1.14
PTPN20-208ENST00000395727 HYPKQ9NX55 129 aa7.94□□□□□ -1.14
PTPN20-208ENST00000395727 CHPF2Q9P2E5 772 aa7.94□□□□□ -1.14
PTPN20-208ENST00000395727 IL16Q14005 1332 aa7.94□□□□□ -1.14
PTPN20-208ENST00000395727 DDX60Q8IY21 1712 aaKnown RBP7.94□□□□□ -1.14
PTPN20-208ENST00000395727 ADAMTSL1Q8N6G6 1762 aa7.93□□□□□ -1.14
PTPN20-208ENST00000395727 GPTP24298 496 aa7.93□□□□□ -1.14
PTPN20-208ENST00000395727 TCIRG1Q13488 830 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms