RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 TPM2P07951 284 aa17.96■□□□□ 0.47
UBE2D3-207ENST00000394801 IGHMBP2P38935 993 aaKnown RBP17.96■□□□□ 0.47
UBE2D3-207ENST00000394801 TYRO3Q06418 890 aa17.96■□□□□ 0.47
UBE2D3-207ENST00000394801 TBC1D10CQ8IV04 446 aa17.96■□□□□ 0.47
UBE2D3-207ENST00000394801 FAM200AQ8TCP9 573 aa17.96■□□□□ 0.47
UBE2D3-207ENST00000394801 BICD2Q8TD16 824 aa17.96■□□□□ 0.47
UBE2D3-207ENST00000394801 MRVI1Q9Y6F6 885 aa17.96■□□□□ 0.47
UBE2D3-207ENST00000394801 FAM177BA6PVY3 158 aa17.95■□□□□ 0.46
UBE2D3-207ENST00000394801 GOLGA8BA8MQT2 603 aa17.95■□□□□ 0.46
UBE2D3-207ENST00000394801 OFD1O75665 1012 aa17.95■□□□□ 0.46
UBE2D3-207ENST00000394801 AIDAQ96BJ3 306 aa17.95■□□□□ 0.46
UBE2D3-207ENST00000394801 USP28Q96RU2 1077 aa17.95■□□□□ 0.46
UBE2D3-207ENST00000394801 ANGEL1Q9UNK9 670 aaKnown RBP17.95■□□□□ 0.46
UBE2D3-207ENST00000394801 ZNF652Q9Y2D9 606 aa17.95■□□□□ 0.46
UBE2D3-207ENST00000394801 COL5A3P25940 1745 aaPredicted RBP17.95■□□□□ 0.46
UBE2D3-207ENST00000394801 A0A0G2JS52 829 aa17.95■□□□□ 0.46
UBE2D3-207ENST00000394801 SNAP23O00161 211 aa17.94■□□□□ 0.46
UBE2D3-207ENST00000394801 APPP05067 770 aa17.94■□□□□ 0.46
UBE2D3-207ENST00000394801 FBXO18Q8NFZ0 1043 aa17.94■□□□□ 0.46
UBE2D3-207ENST00000394801 RGL2O15211 777 aa17.94■□□□□ 0.46
UBE2D3-207ENST00000394801 KCNQ2O43526 872 aa17.94■□□□□ 0.46
UBE2D3-207ENST00000394801 CYB5R4Q7L1T6 521 aa17.94■□□□□ 0.46
UBE2D3-207ENST00000394801 TMEM87BQ96K49 555 aa17.94■□□□□ 0.46
UBE2D3-207ENST00000394801 BCORQ6W2J9 1755 aa17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 NUTM2BA6NNL0 878 aaPredicted RBP17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 NUTM2EB1AL46 878 aaPredicted RBP17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 SH2B2O14492 632 aaPredicted RBP17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 PTMAP06454 111 aaKnown RBP17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 NUTM2AQ8IVF1 878 aaPredicted RBP17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 MAGEB6Q8N7X4 407 aa17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 ORC3Q9UBD5 711 aaPredicted RBP17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 FOSBP53539 338 aa17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 GUCY1B3Q02153 619 aa17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 CKAP2LQ8IYA6 745 aa17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 IFNL3Q8IZI9 196 aa17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 NKX2-3Q8TAU0 364 aa17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 C8orf76Q96K31 380 aa17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 RTEL1Q9NZ71 1219 aa17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 DENND2AQ9ULE3 1009 aa17.93■□□□□ 0.46
UBE2D3-207ENST00000394801 BCL9LQ86UU0 1499 aa17.92■□□□□ 0.46
UBE2D3-207ENST00000394801 CPLX1O14810 134 aa17.92■□□□□ 0.46
UBE2D3-207ENST00000394801 PPFIA3O75145 1194 aa17.92■□□□□ 0.46
UBE2D3-207ENST00000394801 BCAMP50895 628 aa17.92■□□□□ 0.46
UBE2D3-207ENST00000394801 CEBPZQ03701 1054 aaKnown RBP17.92■□□□□ 0.46
UBE2D3-207ENST00000394801 CHRNDQ07001 517 aa17.92■□□□□ 0.46
UBE2D3-207ENST00000394801 FTOQ9C0B1 505 aaKnown RBP eCLIP17.92■□□□□ 0.468e-9■□□□□ 8.1
UBE2D3-207ENST00000394801 EPB41L4AQ9HCS5 686 aaPredicted RBP17.92■□□□□ 0.46
UBE2D3-207ENST00000394801 C4AP0C0L4 1744 aa17.92■□□□□ 0.46
UBE2D3-207ENST00000394801 C4BP0C0L5 1744 aa17.92■□□□□ 0.46
UBE2D3-207ENST00000394801 PNPLA7Q6ZV29 1317 aa17.92■□□□□ 0.46
UBE2D3-207ENST00000394801 AP5Z1O43299 807 aa17.91■□□□□ 0.46
UBE2D3-207ENST00000394801 IGDCC4Q8TDY8 1250 aa17.91■□□□□ 0.46
UBE2D3-207ENST00000394801 CDC5LQ99459 802 aaKnown RBP17.91■□□□□ 0.46
UBE2D3-207ENST00000394801 CTAGE5O15320 804 aa17.91■□□□□ 0.46
UBE2D3-207ENST00000394801 CAVIN2O95810 425 aa17.91■□□□□ 0.46
UBE2D3-207ENST00000394801 GNAT2P19087 354 aa17.91■□□□□ 0.46
UBE2D3-207ENST00000394801 SNW1Q13573 536 aaKnown RBP17.91■□□□□ 0.46
UBE2D3-207ENST00000394801 SF3B3Q15393 1217 aaKnown RBP17.91■□□□□ 0.46
UBE2D3-207ENST00000394801 SGMS1Q86VZ5 419 aa17.91■□□□□ 0.46
UBE2D3-207ENST00000394801 CCAR1Q8IX12 1150 aaKnown RBP17.91■□□□□ 0.46
UBE2D3-207ENST00000394801 GSG1L2A8MUP6 293 aa17.9■□□□□ 0.46
UBE2D3-207ENST00000394801 MBD4O95243 580 aa17.9■□□□□ 0.46
UBE2D3-207ENST00000394801 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.9■□□□□ 0.46
UBE2D3-207ENST00000394801 BRAPQ7Z569 592 aa17.9■□□□□ 0.46
UBE2D3-207ENST00000394801 ENGASEQ8NFI3 743 aa17.9■□□□□ 0.46
UBE2D3-207ENST00000394801 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.9■□□□□ 0.464e-6■□□□□ 11
UBE2D3-207ENST00000394801 B4E1Z4 1266 aa17.9■□□□□ 0.46
UBE2D3-207ENST00000394801 LIFRP42702 1097 aa17.9■□□□□ 0.46
UBE2D3-207ENST00000394801 APOA5Q6Q788 366 aa17.9■□□□□ 0.46
UBE2D3-207ENST00000394801 NAPBQ9H115 298 aa17.9■□□□□ 0.46
UBE2D3-207ENST00000394801 ZNF804BA4D1E1 1349 aa17.89■□□□□ 0.46
UBE2D3-207ENST00000394801 ANO6Q4KMQ2 910 aa17.89■□□□□ 0.45
UBE2D3-207ENST00000394801 SASS6Q6UVJ0 657 aa17.89■□□□□ 0.45
UBE2D3-207ENST00000394801 LINC00116Q8NCU8 138 aa17.89■□□□□ 0.45
UBE2D3-207ENST00000394801 NEDD4P46934 1319 aa17.89■□□□□ 0.45
UBE2D3-207ENST00000394801 METAP2P50579 478 aaKnown RBP eCLIP17.89■□□□□ 0.45
UBE2D3-207ENST00000394801 ADALQ6DHV7 355 aa17.89■□□□□ 0.45
UBE2D3-207ENST00000394801 LINC00301Q8NCQ3 95 aa17.89■□□□□ 0.45
UBE2D3-207ENST00000394801 CNNM2Q9H8M5 875 aa17.89■□□□□ 0.45
UBE2D3-207ENST00000394801 ARMT1Q9H993 441 aa17.89■□□□□ 0.45
UBE2D3-207ENST00000394801 CBX8Q9HC52 389 aa17.89■□□□□ 0.45
UBE2D3-207ENST00000394801 POLR3EQ9NVU0 708 aa17.89■□□□□ 0.45
UBE2D3-207ENST00000394801 CNTNAP4Q9C0A0 1308 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 CDKL5O76039 1030 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 FAM160A1Q05DH4 1040 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 SLC10A5Q5PT55 438 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 OTUD7BQ6GQQ9 843 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 GOLPH3LQ9H4A5 285 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 LY9Q9HBG7 655 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 TIAM2Q8IVF5 1701 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 A0A1W2PQ27 194 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 A0A1W2PQ64 194 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 A0A1W2PQD8 194 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 YEATS4O95619 227 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 UBE4AQ14139 1066 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 CCDC73Q6ZRK6 1079 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 RAB11FIP4Q86YS3 637 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 ZSWIM5Q9P217 1185 aa17.88■□□□□ 0.45
UBE2D3-207ENST00000394801 PCDHA7Q9UN72 937 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms