RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 C15orf52Q6ZUT6 534 aaKnown RBP17.74■□□□□ 0.43
CCT4-201ENST00000394440 NECAB1Q8N987 351 aa17.74■□□□□ 0.43
CCT4-201ENST00000394440 RBM17Q96I25 401 aaKnown RBP17.74■□□□□ 0.43
CCT4-201ENST00000394440 EPB41L4AQ9HCS5 686 aaPredicted RBP17.74■□□□□ 0.43
CCT4-201ENST00000394440 CRAMP1Q96RY5 1269 aa17.74■□□□□ 0.43
CCT4-201ENST00000394440 SMC3Q9UQE7 1217 aa17.74■□□□□ 0.43
CCT4-201ENST00000394440 ARMT1Q9H993 441 aa17.73■□□□□ 0.43
CCT4-201ENST00000394440 ABCF2Q9UG63 623 aa17.73■□□□□ 0.43
CCT4-201ENST00000394440 PATL2C9JE40 543 aaKnown RBP17.73■□□□□ 0.43
CCT4-201ENST00000394440 ZNF213O14771 459 aa17.73■□□□□ 0.43
CCT4-201ENST00000394440 EZH2Q15910 746 aaKnown RBP17.73■□□□□ 0.43
CCT4-201ENST00000394440 ADGRA1Q86SQ6 560 aa17.73■□□□□ 0.43
CCT4-201ENST00000394440 MB21D2Q8IYB1 491 aaPredicted RBP17.73■□□□□ 0.43
CCT4-201ENST00000394440 LCORLQ8N3X6 602 aa17.73■□□□□ 0.43
CCT4-201ENST00000394440 ZNF384Q8TF68 577 aa17.73■□□□□ 0.43
CCT4-201ENST00000394440 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
CCT4-201ENST00000394440 BRF1Q92994 677 aa17.72■□□□□ 0.43
CCT4-201ENST00000394440 LRRC2Q9BYS8 371 aa17.72■□□□□ 0.43
CCT4-201ENST00000394440 ANKIB1Q9P2G1 1089 aa17.72■□□□□ 0.43
CCT4-201ENST00000394440 TCHHQ07283 1943 aa17.72■□□□□ 0.43
CCT4-201ENST00000394440 GSG1L2A8MUP6 293 aa17.72■□□□□ 0.43
CCT4-201ENST00000394440 BBOX1O75936 387 aa17.72■□□□□ 0.43
CCT4-201ENST00000394440 GNAT2P19087 354 aa17.72■□□□□ 0.43
CCT4-201ENST00000394440 GJB2P29033 226 aa17.72■□□□□ 0.43
CCT4-201ENST00000394440 GTF3C6Q969F1 213 aa17.72■□□□□ 0.43
CCT4-201ENST00000394440 PTMSP20962 102 aa17.71■□□□□ 0.43
CCT4-201ENST00000394440 CYP7A1P22680 504 aa17.71■□□□□ 0.43
CCT4-201ENST00000394440 IFNL3Q8IZI9 196 aa17.71■□□□□ 0.43
CCT4-201ENST00000394440 BRIP1Q9BX63 1249 aa17.71■□□□□ 0.43
CCT4-201ENST00000394440 RAI14Q9P0K7 980 aa17.71■□□□□ 0.43
CCT4-201ENST00000394440 WDR33Q9C0J8 1336 aaKnown RBP17.71■□□□□ 0.43
CCT4-201ENST00000394440 GPSM2P81274 684 aa17.71■□□□□ 0.43
CCT4-201ENST00000394440 TBC1D10CQ8IV04 446 aa17.71■□□□□ 0.43
CCT4-201ENST00000394440 WDR19Q8NEZ3 1342 aa17.71■□□□□ 0.42
CCT4-201ENST00000394440 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
CCT4-201ENST00000394440 TRAK2O60296 914 aa17.7■□□□□ 0.42
CCT4-201ENST00000394440 SYT1P21579 422 aa17.7■□□□□ 0.42
CCT4-201ENST00000394440 EVCP57679 992 aa17.7■□□□□ 0.42
CCT4-201ENST00000394440 NCOA7Q8NI08 942 aa17.7■□□□□ 0.42
CCT4-201ENST00000394440 CAMKK2Q96RR4 588 aa17.7■□□□□ 0.42
CCT4-201ENST00000394440 RIOK1Q9BRS2 568 aaKnown RBP17.7■□□□□ 0.42
CCT4-201ENST00000394440 PODXL2Q9NZ53 605 aa17.7■□□□□ 0.42
CCT4-201ENST00000394440 APPP05067 770 aa17.7■□□□□ 0.42
CCT4-201ENST00000394440 SALL1Q9NSC2 1324 aa17.7■□□□□ 0.42
CCT4-201ENST00000394440 BAZ2AQ9UIF9 1905 aaKnown RBP17.7■□□□□ 0.42
CCT4-201ENST00000394440 PRKAB2O43741 272 aa17.69■□□□□ 0.42
CCT4-201ENST00000394440 ANTXR2P58335 489 aa17.69■□□□□ 0.42
CCT4-201ENST00000394440 MIGA1Q8NAN2 632 aa17.69■□□□□ 0.42
CCT4-201ENST00000394440 TDRD7Q8NHU6 1098 aaKnown RBP17.69■□□□□ 0.42
CCT4-201ENST00000394440 NSUN4Q96CB9 384 aaKnown RBP17.69■□□□□ 0.42
CCT4-201ENST00000394440 ANO8Q9HCE9 1232 aaPredicted RBP17.69■□□□□ 0.42
CCT4-201ENST00000394440 GOLGA6L22H0YM25 854 aa17.69■□□□□ 0.42
CCT4-201ENST00000394440 STX6O43752 255 aa17.69■□□□□ 0.42
CCT4-201ENST00000394440 PFKFB2O60825 505 aa17.69■□□□□ 0.42
CCT4-201ENST00000394440 MMP10P09238 476 aa17.69■□□□□ 0.42
CCT4-201ENST00000394440 ATP2B4P23634 1241 aa17.69■□□□□ 0.42
CCT4-201ENST00000394440 TMED8Q6PL24 325 aaPredicted RBP17.69■□□□□ 0.42
CCT4-201ENST00000394440 TMC4Q7Z404 712 aa17.69■□□□□ 0.42
CCT4-201ENST00000394440 IGSF3O75054 1194 aa17.68■□□□□ 0.42
CCT4-201ENST00000394440 MCM5P33992 734 aa17.68■□□□□ 0.42
CCT4-201ENST00000394440 STK3Q13188 491 aa17.68■□□□□ 0.42
CCT4-201ENST00000394440 GSE1Q14687 1217 aa17.68■□□□□ 0.42
CCT4-201ENST00000394440 NAPBQ9H115 298 aa17.68■□□□□ 0.42
CCT4-201ENST00000394440 SLC4A4Q9Y6R1 1079 aa17.68■□□□□ 0.42
CCT4-201ENST00000394440 SRGNP10124 158 aa17.68■□□□□ 0.42
CCT4-201ENST00000394440 APOBRQ0VD83 1088 aa17.68■□□□□ 0.42
CCT4-201ENST00000394440 NAA16Q6N069 864 aaPredicted RBP17.68■□□□□ 0.42
CCT4-201ENST00000394440 CHST3Q7LGC8 479 aa17.68■□□□□ 0.42
CCT4-201ENST00000394440 MAGEB6P1A0A0J9YX57 407 aa17.67■□□□□ 0.42
CCT4-201ENST00000394440 FGD1P98174 961 aa17.67■□□□□ 0.42
CCT4-201ENST00000394440 SCRN1Q12765 414 aa17.67■□□□□ 0.42
CCT4-201ENST00000394440 R3HDM1Q15032 1099 aaKnown RBP17.67■□□□□ 0.42
CCT4-201ENST00000394440 FOXD4L5Q5VV16 416 aaPredicted RBP17.67■□□□□ 0.42
CCT4-201ENST00000394440 MCTP1Q6DN14 999 aa17.67■□□□□ 0.42
CCT4-201ENST00000394440 RALYLQ86SE5 291 aaKnown RBP17.67■□□□□ 0.42
CCT4-201ENST00000394440 FOXD4L4Q8WXT5 416 aaPredicted RBP17.67■□□□□ 0.42
CCT4-201ENST00000394440 ZNF274Q96GC6 653 aaPredicted RBP17.67■□□□□ 0.42
CCT4-201ENST00000394440 NSFL1CQ9UNZ2 370 aaKnown RBP17.67■□□□□ 0.42
CCT4-201ENST00000394440 LAMB1P07942 1786 aa17.67■□□□□ 0.42
CCT4-201ENST00000394440 PRC1O43663 620 aa17.67■□□□□ 0.42
CCT4-201ENST00000394440 DTNBO60941 627 aa17.67■□□□□ 0.42
CCT4-201ENST00000394440 ZSCAN22P10073 491 aaPredicted RBP17.67■□□□□ 0.42
CCT4-201ENST00000394440 PRDX5P30044 214 aa17.67■□□□□ 0.42
CCT4-201ENST00000394440 MECOMQ03112 1051 aa17.67■□□□□ 0.42
CCT4-201ENST00000394440 ZNF804AQ7Z570 1209 aa17.67■□□□□ 0.42
CCT4-201ENST00000394440 NKX2-3Q8TAU0 364 aa17.67■□□□□ 0.42
CCT4-201ENST00000394440 UFL1O94874 794 aa17.66■□□□□ 0.42
CCT4-201ENST00000394440 CHAF1AQ13111 956 aaPredicted RBP17.66■□□□□ 0.42
CCT4-201ENST00000394440 SLC15A2Q16348 729 aa17.66■□□□□ 0.42
CCT4-201ENST00000394440 CHAMP1Q96JM3 812 aa17.66■□□□□ 0.42
CCT4-201ENST00000394440 GPR101Q96P66 508 aaPredicted RBP17.66■□□□□ 0.42
CCT4-201ENST00000394440 NACAP1Q9BZK3 213 aa17.66■□□□□ 0.42
CCT4-201ENST00000394440 GGA1Q9UJY5 639 aa17.66■□□□□ 0.42
CCT4-201ENST00000394440 MTMR6Q9Y217 621 aa17.66■□□□□ 0.42
CCT4-201ENST00000394440 PARP3Q9Y6F1 533 aa17.66■□□□□ 0.42
CCT4-201ENST00000394440 SP8Q8IXZ3 490 aa17.66■□□□□ 0.42
CCT4-201ENST00000394440 SMARCC2Q8TAQ2 1214 aa17.66■□□□□ 0.42
CCT4-201ENST00000394440 LMBRD1Q9NUN5 540 aa17.66■□□□□ 0.42
CCT4-201ENST00000394440 TACC3Q9Y6A5 838 aa17.66■□□□□ 0.42
CCT4-201ENST00000394440 NEDD4P46934 1319 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms