RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 CUL3Q13618 768 aa10.12□□□□□ -0.79
CHD2-201ENST00000394196 MPHOSPH8Q99549 860 aa10.12□□□□□ -0.79
CHD2-201ENST00000394196 ACTR5Q9H9F9 607 aaPredicted RBP10.12□□□□□ -0.79
CHD2-201ENST00000394196 MYO1BO43795 1136 aa10.12□□□□□ -0.79
CHD2-201ENST00000394196 RNASELQ05823 741 aaKnown RBP10.12□□□□□ -0.79
CHD2-201ENST00000394196 C16orf87Q6PH81 154 aa10.12□□□□□ -0.79
CHD2-201ENST00000394196 CNNM1Q9NRU3 951 aa10.12□□□□□ -0.79
CHD2-201ENST00000394196 WDHD1O75717 1129 aaPredicted RBP10.12□□□□□ -0.79
CHD2-201ENST00000394196 KIFC3Q9BVG8 833 aa10.12□□□□□ -0.79
CHD2-201ENST00000394196 RRP15Q9Y3B9 282 aaKnown RBP10.12□□□□□ -0.79
CHD2-201ENST00000394196 ZSCAN22P10073 491 aaPredicted RBP10.12□□□□□ -0.79
CHD2-201ENST00000394196 ANO6Q4KMQ2 910 aa10.12□□□□□ -0.79
CHD2-201ENST00000394196 PNMA8AQ86V59 439 aaPredicted RBP10.12□□□□□ -0.79
CHD2-201ENST00000394196 ZC3H6P61129 1189 aaKnown RBP10.12□□□□□ -0.79
CHD2-201ENST00000394196 EXOSC9Q06265 439 aaKnown RBP10.12□□□□□ -0.79
CHD2-201ENST00000394196 UBE2Q1Q7Z7E8 422 aa10.12□□□□□ -0.79
CHD2-201ENST00000394196 CCDC124Q96CT7 223 aaKnown RBP10.12□□□□□ -0.79
CHD2-201ENST00000394196 CALR3Q96L12 384 aaKnown RBP10.12□□□□□ -0.79
CHD2-201ENST00000394196 EVCP57679 992 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 PPP2R3AQ06190 1150 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.11□□□□□ -0.79
CHD2-201ENST00000394196 RIOK1Q9BRS2 568 aaKnown RBP10.11□□□□□ -0.79
CHD2-201ENST00000394196 SYKP43405 635 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 SLC44A4Q53GD3 710 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 FBXO2Q9UK22 296 aaPredicted RBP10.11□□□□□ -0.79
CHD2-201ENST00000394196 SMARCA2P51531 1590 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 PPP2R1AP30153 589 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 ZNF830Q96NB3 372 aaPredicted RBP10.11□□□□□ -0.79
CHD2-201ENST00000394196 MCF2LO15068 1137 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 APBB1IPQ7Z5R6 666 aaPredicted RBP10.11□□□□□ -0.79
CHD2-201ENST00000394196 PRPF38AQ8NAV1 312 aaKnown RBP10.11□□□□□ -0.79
CHD2-201ENST00000394196 KRT6AP02538 564 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 KRT6BP04259 564 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 KRT6CP48668 564 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 BRD3Q15059 726 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 ARHGEF2Q92974 986 aaKnown RBP10.11□□□□□ -0.79
CHD2-201ENST00000394196 OSBPL9Q96SU4 736 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 ZSWIM4Q9H7M6 989 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 C4BPBP20851 252 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 NECTIN2Q92692 538 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 PSMA7O14818 248 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 KDM1AO60341 852 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 TLK2Q86UE8 772 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 KIAA2013Q8IYS2 634 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 TRIM55Q9BYV6 548 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 TRIM8Q9BZR9 551 aa10.11□□□□□ -0.79
CHD2-201ENST00000394196 PPP2R5EQ16537 467 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 HDGFL1Q5TGJ6 251 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 CPLX3Q8WVH0 158 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 BSDC1Q9NW68 430 aaPredicted RBP10.1□□□□□ -0.79
CHD2-201ENST00000394196 TSKSQ9UJT2 592 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 TTF2Q9UNY4 1162 aaKnown RBP10.1□□□□□ -0.79
CHD2-201ENST00000394196 ZNF148Q9UQR1 794 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 GPRASP1Q5JY77 1395 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 S100BP04271 92 aaPredicted RBP10.1□□□□□ -0.79
CHD2-201ENST00000394196 CCT6AP40227 531 aaKnown RBP10.1□□□□□ -0.79
CHD2-201ENST00000394196 ANKRD20A4Q4UJ75 823 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 ANKRD20A8PQ5CZ79 823 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 ANKRD20A2Q5SQ80 823 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 ANKRD20A1Q5TYW2 823 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 BICDL1Q6ZP65 573 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 AACSQ86V21 672 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 QKIQ96PU8 341 aaKnown RBP eCLIP10.1□□□□□ -0.796e-7■■■■□ 24.8
CHD2-201ENST00000394196 SERPINA10Q9UK55 444 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 NUDCD3Q8IVD9 361 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 DCDC2Q9UHG0 476 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 UTP11Q9Y3A2 253 aaKnown RBP10.1□□□□□ -0.79
CHD2-201ENST00000394196 S100A9P06702 114 aaKnown RBP10.1□□□□□ -0.79
CHD2-201ENST00000394196 SLC30A9Q6PML9 568 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 BAIAP2L1Q9UHR4 511 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 ANGPTL3Q9Y5C1 460 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 CCDC88BA6NC98 1476 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 ESYT2A0FGR8 921 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 MTHFSP49914 203 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 CCDC42Q96M95 316 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 CHUKO15111 745 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 LETM2Q2VYF4 491 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 ANKRD13AQ8IZ07 590 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 GOLGA8QA0A0J9YX86 632 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 GOLGA8OA6NCC3 632 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 GOLGA8NF8WBI6 632 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 MCF2L2Q86YR7 1114 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.1□□□□□ -0.797e-7■■■■■ 57.4
CHD2-201ENST00000394196 PARP2Q9UGN5 583 aa10.1□□□□□ -0.79
CHD2-201ENST00000394196 TSPAN9O75954 239 aa10.09□□□□□ -0.79
CHD2-201ENST00000394196 UBA7P41226 1012 aa10.09□□□□□ -0.79
CHD2-201ENST00000394196 PLEKHO1Q53GL0 409 aaPredicted RBP10.09□□□□□ -0.79
CHD2-201ENST00000394196 TRIM68Q6AZZ1 485 aa10.09□□□□□ -0.79
CHD2-201ENST00000394196 ERCC5P28715 1186 aaPredicted RBP10.09□□□□□ -0.79
CHD2-201ENST00000394196 CCDC15Q0P6D6 951 aa10.09□□□□□ -0.79
CHD2-201ENST00000394196 DDX42Q86XP3 938 aaKnown RBP eCLIP10.09□□□□□ -0.79
CHD2-201ENST00000394196 FAM129AQ9BZQ8 928 aa10.09□□□□□ -0.79
CHD2-201ENST00000394196 GOLGA6BA6NDN3 693 aa10.09□□□□□ -0.79
CHD2-201ENST00000394196 MSL3P1P0C860 447 aa10.09□□□□□ -0.79
CHD2-201ENST00000394196 PSMD2Q13200 908 aa10.09□□□□□ -0.79
CHD2-201ENST00000394196 CDCA7LQ96GN5 454 aa10.09□□□□□ -0.79
CHD2-201ENST00000394196 MSL3Q8N5Y2 521 aaKnown RBP10.09□□□□□ -0.79
CHD2-201ENST00000394196 CASP10Q92851 521 aa10.09□□□□□ -0.79
CHD2-201ENST00000394196 MAK16Q9BXY0 300 aaKnown RBP10.09□□□□□ -0.79
CHD2-201ENST00000394196 KIF21BO75037 1637 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms