RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 TBC1D10CQ8IV04 446 aa10.63□□□□□ -0.71
TDP1-202ENST00000393452 AIDAQ96BJ3 306 aa10.63□□□□□ -0.71
TDP1-202ENST00000393452 BCL2L12Q9HB09 334 aa10.63□□□□□ -0.71
TDP1-202ENST00000393452 NHSQ6T4R5 1651 aa10.63□□□□□ -0.71
TDP1-202ENST00000393452 PATL2C9JE40 543 aaKnown RBP10.62□□□□□ -0.71
TDP1-202ENST00000393452 DHX16O60231 1041 aaKnown RBP10.62□□□□□ -0.71
TDP1-202ENST00000393452 TRDNQ13061 729 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 ATL3Q6DD88 541 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 C3orf67Q6ZVT6 689 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 PTF1AQ7RTS3 328 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 MAGEB6Q8N7X4 407 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 CFAP45Q9UL16 551 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 C4AP0C0L4 1744 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 KLF18A0A0U1RQI7 1052 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 RPS6KA4O75676 772 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 LIG1P18858 919 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 RGS22Q8NE09 1264 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 PGBD1Q96JS3 809 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 EPB41L4AQ9HCS5 686 aaPredicted RBP10.62□□□□□ -0.71
TDP1-202ENST00000393452 BSDC1Q9NW68 430 aaPredicted RBP10.62□□□□□ -0.71
TDP1-202ENST00000393452 NARFQ9UHQ1 456 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 TIAM2Q8IVF5 1701 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 PNPLA7Q6ZV29 1317 aa10.62□□□□□ -0.71
TDP1-202ENST00000393452 TAF1LQ8IZX4 1826 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 APPP05067 770 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 KCNQ4P56696 695 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 UBE4AQ14139 1066 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 GIMAP6Q6P9H5 292 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 ANKRD18AQ8IVF6 992 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 IFNL3Q8IZI9 196 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 NKX2-3Q8TAU0 364 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 DENND2AQ9ULE3 1009 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 NAP1L2Q9ULW6 460 aaPredicted RBP10.61□□□□□ -0.71
TDP1-202ENST00000393452 ANGEL1Q9UNK9 670 aaKnown RBP10.61□□□□□ -0.71
TDP1-202ENST00000393452 GOLGA8BA8MQT2 603 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 GSG1L2A8MUP6 293 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 MBD4O95243 580 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 TPRNQ4KMQ1 711 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 TBC1D9BQ66K14 1250 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 RBM43Q6ZSC3 357 aaKnown RBP10.61□□□□□ -0.71
TDP1-202ENST00000393452 CYB5R4Q7L1T6 521 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 ZSCAN30Q86W11 494 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 RCOR1Q9UKL0 485 aa10.61□□□□□ -0.71
TDP1-202ENST00000393452 GOLGA6L4A6NEF3 574 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 SH2B2O14492 632 aaPredicted RBP10.6□□□□□ -0.71
TDP1-202ENST00000393452 GNAT2P19087 354 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 TMEM87BQ96K49 555 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 NUP62CLQ9H1M0 184 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 DDX19AQ9NUU7 478 aaKnown RBP10.6□□□□□ -0.71
TDP1-202ENST00000393452 LY75O60449 1722 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 SPATA31A6Q5VVP1 1343 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 IGDCC4Q8TDY8 1250 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 NAPBQ9H115 298 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 ARMT1Q9H993 441 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 DACT1Q9NYF0 836 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 MINPP1Q9UNW1 487 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 SBF2Q86WG5 1849 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 NEDD4P46934 1319 aa10.6□□□□□ -0.71
TDP1-202ENST00000393452 CACNA1SQ13698 1873 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 SGMS1Q86VZ5 419 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 FBXO18Q8NFZ0 1043 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 NYXQ9GZU5 481 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 USP21Q9UK80 565 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 B4E1Z4 1266 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 CCDC192P0DO97 292 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 LIFRP42702 1097 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 MAP3K11Q16584 847 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 APOA5Q6Q788 366 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 LCORLQ8N3X6 602 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 ZNF396Q96N95 335 aaPredicted RBP10.59□□□□□ -0.71
TDP1-202ENST00000393452 USP28Q96RU2 1077 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 CLSTN2Q9H4D0 955 aa10.59□□□□□ -0.71
TDP1-202ENST00000393452 ORC3Q9UBD5 711 aaPredicted RBP10.59□□□□□ -0.71
TDP1-202ENST00000393452 NOL7Q9UMY1 257 aaKnown RBP10.59□□□□□ -0.71
TDP1-202ENST00000393452 COL1A1P02452 1464 aaPredicted RBP10.59□□□□□ -0.71
TDP1-202ENST00000393452 CPLX1O14810 134 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 PPFIA3O75145 1194 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 NR1I2O75469 434 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 AKNAD1Q5T1N1 836 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 CELF1Q92879 486 aaKnown RBP10.58□□□□□ -0.72
TDP1-202ENST00000393452 C8orf76Q96K31 380 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 CNNM2Q9H8M5 875 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 LY9Q9HBG7 655 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 GNL3LQ9NVN8 582 aaKnown RBP10.58□□□□□ -0.72
TDP1-202ENST00000393452 LRP2BPQ9P2M1 347 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 TACC3Q9Y6A5 838 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 PRKAB2O43741 272 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 GYG1P46976 350 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 FOSBP53539 338 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 GUCY1B3Q02153 619 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 BICDL1Q6ZP65 573 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 SMIM5Q71RC9 77 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 STAG1Q8WVM7 1258 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 SETDB2Q96T68 719 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 NACAP1Q9BZK3 213 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 TNMDQ9H2S6 317 aa10.58□□□□□ -0.72
TDP1-202ENST00000393452 SRP68Q9UHB9 627 aaKnown RBP10.58□□□□□ -0.72
TDP1-202ENST00000393452 WTIPA6NIX2 430 aaPredicted RBP10.57□□□□□ -0.72
TDP1-202ENST00000393452 GNPATO15228 680 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms