RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 TRIM56Q9BRZ2 755 aaKnown RBP4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 LNPKQ9C0E8 428 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 LRRC4BQ9NT99 713 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 KLF15Q9UIH9 416 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 EFR3BQ9Y2G0 817 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 CYP11A1P05108 521 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 CELA3AP09093 270 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 ESRRAP11474 423 aaPredicted RBP4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 IMPDH2P12268 514 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 TFE3P19532 575 aaPredicted RBP4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 GARTP22102 1010 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 NASPP49321 788 aaPredicted RBP4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 MPP2Q14168 576 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 NFE2L2Q16236 605 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 PSAPL1Q6NUJ1 521 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 LLGL2Q6P1M3 1020 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 DCAF11Q8TEB1 546 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 SLC16A10Q8TF71 515 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 MKL1Q969V6 931 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 CRBNQ96SW2 442 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 MDFIQ99750 246 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 LPIN3Q9BQK8 851 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 LRRC3Q9BY71 257 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 OSGEPQ9NPF4 335 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 GINM1Q9NU53 330 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 R3HCC1Q9Y3T6 440 aaKnown RBP4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 PPME1Q9Y570 386 aa4.43□□□□□ -1.7
TRAJ40-201ENST00000390497 NEURL1BA8MQ27 555 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 H3BRJ5 948 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 SOX1O00570 391 aaPredicted RBP4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 LILRB5O75023 590 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 PAGE1O75459 146 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 TRIM37O94972 964 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 BPNT1O95861 308 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 ZNF157P51786 506 aaPredicted RBP4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 PIP4K2BP78356 416 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 SRSF11Q05519 484 aaKnown RBP4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 FAM160A1Q05DH4 1040 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 CCDC144BQ3MJ40 725 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 HP1BP3Q5SSJ5 553 aaPredicted RBP4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 LRP10Q7Z4F1 713 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 SULF2Q8IWU5 870 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 IL22RA1Q8N6P7 574 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 OR6P1Q8NGX9 317 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 JARID2Q92833 1246 aaPredicted RBP4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 LACRTQ9GZZ8 138 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 CBX8Q9HC52 389 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 UBP1Q9NZI7 540 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 GGA1Q9UJY5 639 aa4.42□□□□□ -1.7
TRAJ40-201ENST00000390497 TLDC2A0PJX2 215 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 FAM221AA4D161 298 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 U2SURPO15042 1029 aaKnown RBP4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 CILPO75339 1184 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 VSIG8P0DPA2 414 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 MCM4P33991 863 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 C19orf57Q0VDD7 668 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 GAS6Q14393 721 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 TNNI3KQ59H18 835 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 GDF6Q6KF10 455 aaPredicted RBP4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 SLCO4C1Q6ZQN7 724 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 FCHSD1Q86WN1 690 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 MAP4K3Q8IVH8 894 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 FAM177A1Q8N128 213 aaPredicted RBP4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 KLHL23Q8NBE8 558 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 PMFBP1Q8TBY8 1022 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 SRRTQ9BXP5 876 aaKnown RBP4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 OSBPL2Q9H1P3 480 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 ZSWIM4Q9H7M6 989 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 SIRPGQ9P1W8 387 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 TRIM33Q9UPN9 1127 aa4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 TMA7Q9Y2S6 64 aaKnown RBP4.41□□□□□ -1.7
TRAJ40-201ENST00000390497 IGF1RP08069 1367 aa4.4□□□□□ -1.7
TRAJ40-201ENST00000390497 F6X3S4 739 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 H3BM21 787 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 SMARCA5O60264 1052 aaPredicted RBP4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 F13A1P00488 732 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 GSTP1P09211 210 aaKnown RBP4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 EPXP11678 715 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 EIF6P56537 245 aaKnown RBP4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 RPL6Q02878 288 aaKnown RBP4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 ZNF252P-AS1Q0IIN9 211 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 LRRFIP1Q32MZ4 808 aaKnown RBP4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 SEZ6Q53EL9 994 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 BNC2Q6ZN30 1099 aaPredicted RBP4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 C20orf204Q6ZNR8 217 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 GPR161Q8N6U8 529 aaKnown RBP4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 NUDT8Q8WV74 236 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 CORO1BQ9BR76 489 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 EHMT1Q9H9B1 1298 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 ZNF408Q9H9D4 720 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 JPH1Q9HDC5 661 aaPredicted RBP4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 PRDM6Q9NQX0 595 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 SH2B1Q9NRF2 756 aaPredicted RBP4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 KRT82Q9NSB4 513 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 PCDHB5Q9Y5E4 795 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 TACC3Q9Y6A5 838 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 SNCAIPQ9Y6H5 919 aa4.4□□□□□ -1.71
TRAJ40-201ENST00000390497 CLSTN1O94985 981 aa4.39□□□□□ -1.71
TRAJ40-201ENST00000390497 ATE1O95260 518 aa4.39□□□□□ -1.71
TRAJ40-201ENST00000390497 SLFN14P0C7P3 912 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms