RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 TMPRSS13Q9BYE2 586 aa4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 OSBPL7Q9BZF2 842 aa4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 SUGCTQ9HAC7 445 aa4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 USP21Q9UK80 565 aa4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 WWC3Q9ULE0 1092 aa4.29□□□□□ -1.72
RNU6-541P-201ENST00000384709 LOC100289279A0A1B0GTE1 492 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 ANKRD33BA6NCL7 494 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 GADD45BO75293 160 aaPredicted RBP4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 PRPF40AO75400 957 aaKnown RBP4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 MAPK8P45983 427 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 IREB2P48200 963 aaKnown RBP4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 FAAP100Q0VG06 881 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 DOC2BQ14184 412 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 DUOXA2Q1HG44 320 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 ZMYM1Q5SVZ6 1142 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 SLC51AQ86UW1 340 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 SMG8Q8ND04 991 aaKnown RBP4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 CARD10Q9BWT7 1032 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 RNF208Q9H0X6 261 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 GZF1Q9H116 711 aaPredicted RBP4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 NLRP2Q9NX02 1062 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 PPP4R2Q9NY27 417 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 CACNA2D2Q9NY47 1150 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 PPM1HQ9ULR3 514 aa4.28□□□□□ -1.72
RNU6-541P-201ENST00000384709 DDX3YO15523 660 aaKnown RBP4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 DYRK3O43781 588 aa4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 ATP2B2Q01814 1243 aa4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 CCDC27Q2M243 656 aa4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 EXOSC6Q5RKV6 272 aaKnown RBP4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 NXPE4Q6UWF7 544 aa4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 UBASH3BQ8TF42 649 aa4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 UBL7Q96S82 380 aaPredicted RBP4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 SETDB2Q96T68 719 aa4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 CEP41Q9BYV8 373 aa4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 GSX1Q9H4S2 264 aaPredicted RBP4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 C12orf49Q9H741 205 aa4.27□□□□□ -1.73
RNU6-541P-201ENST00000384709 ALX3O95076 343 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 TIAF1O95411 115 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 DLGAP3O95886 979 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 CYP11A1P05108 521 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 LDHBP07195 334 aaKnown RBP4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 CTSBP07858 339 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 YBX3P16989 372 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 GSTT1P30711 240 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 AP3B2Q13367 1082 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 ANKRD34AQ69YU3 496 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 SCARA3Q6AZY7 606 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 ACAD11Q709F0 780 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 PDZD3Q86UT5 571 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 ARMC10Q8N2F6 343 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 AGGF1Q8N302 714 aaeCLIP4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 NECAB3Q96P71 396 aaPredicted RBP4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 FAM8A1Q9UBU6 413 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 AK5Q9Y6K8 562 aa4.26□□□□□ -1.73
RNU6-541P-201ENST00000384709 CDC25BP30305 580 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 GNA15P30679 374 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 FCGRTP55899 365 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 NLRP12P59046 1061 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 DAB2P98082 770 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 GSTM4Q03013 218 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 ZNF252P-AS1Q0IIN9 211 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 POU4F3Q15319 338 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 EAPPQ56P03 285 aaPredicted RBP4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 DTHD1Q6ZMT9 781 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 PRR23CQ6ZRP0 262 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 DDX54Q8TDD1 881 aaKnown RBP4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 SLC7A3Q8WY07 619 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 RUSC1Q9BVN2 902 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 KRT82Q9NSB4 513 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 SPG7Q9UQ90 795 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 HIF3AQ9Y2N7 669 aa4.25□□□□□ -1.73
RNU6-541P-201ENST00000384709 BMP6P22004 513 aa4.24□□□□□ -1.73
RNU6-541P-201ENST00000384709 FZD5Q13467 585 aa4.24□□□□□ -1.73
RNU6-541P-201ENST00000384709 HP1BP3Q5SSJ5 553 aaPredicted RBP4.24□□□□□ -1.73
RNU6-541P-201ENST00000384709 TMC4Q7Z404 712 aa4.24□□□□□ -1.73
RNU6-541P-201ENST00000384709 TP53INP1Q96A56 240 aa4.24□□□□□ -1.73
RNU6-541P-201ENST00000384709 MYRFLQ96LU7 910 aa4.24□□□□□ -1.73
RNU6-541P-201ENST00000384709 CYP4F12Q9HCS2 524 aa4.24□□□□□ -1.73
RNU6-541P-201ENST00000384709 TMEM39AQ9NV64 488 aa4.24□□□□□ -1.73
RNU6-541P-201ENST00000384709 PCDHGC5Q9Y5F6 944 aa4.24□□□□□ -1.73
RNU6-541P-201ENST00000384709 ENC1O14682 589 aa4.23□□□□□ -1.73
RNU6-541P-201ENST00000384709 NME2P22392 152 aa4.23□□□□□ -1.73
RNU6-541P-201ENST00000384709 MAOBP27338 520 aa4.23□□□□□ -1.73
RNU6-541P-201ENST00000384709 PREPP48147 710 aa4.23□□□□□ -1.73
RNU6-541P-201ENST00000384709 KIF4BQ2VIQ3 1234 aa4.23□□□□□ -1.73
RNU6-541P-201ENST00000384709 EZH1Q92800 747 aaPredicted RBP4.23□□□□□ -1.73
RNU6-541P-201ENST00000384709 RAXQ9Y2V3 346 aa4.23□□□□□ -1.73
RNU6-541P-201ENST00000384709 ZBTB7CA1YPR0 619 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 USP17L7P0C7H9 530 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 GLB1P16278 677 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 EIF4BP23588 611 aaKnown RBP4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 ARNTP27540 789 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 PPP2R3AQ06190 1150 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 SOX4Q06945 474 aaPredicted RBP4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 SV2BQ7L1I2 683 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 CLEC10AQ8IUN9 316 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 FAM20CQ8IXL6 584 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 C2CD4AQ8NCU7 369 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms