RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 GNL3LQ9NVN8 582 aaKnown RBP30.64■■■□□ 2.5
TNFRSF4-201ENST00000379236 ANGEL1Q9UNK9 670 aaKnown RBP30.64■■■□□ 2.5
TNFRSF4-201ENST00000379236 TNNQ9UQP3 1299 aa30.64■■■□□ 2.5
TNFRSF4-201ENST00000379236 MAST3O60307 1309 aa30.64■■■□□ 2.5
TNFRSF4-201ENST00000379236 CASP8AP2Q9UKL3 1982 aa30.63■■■□□ 2.49
TNFRSF4-201ENST00000379236 SUPT20HL1Q3ZLR7 823 aa30.63■■■□□ 2.49
TNFRSF4-201ENST00000379236 FTSJ3Q8IY81 847 aaKnown RBP30.63■■■□□ 2.49
TNFRSF4-201ENST00000379236 PPP1R12BO60237 982 aaPredicted RBP30.62■■■□□ 2.49
TNFRSF4-201ENST00000379236 DZIP1LQ8IYY4 767 aaKnown RBP30.62■■■□□ 2.49
TNFRSF4-201ENST00000379236 TEKT1Q969V4 418 aa30.62■■■□□ 2.49
TNFRSF4-201ENST00000379236 TDRD3Q9H7E2 651 aaKnown RBP30.62■■■□□ 2.49
TNFRSF4-201ENST00000379236 SPDYE2Q495Y8 402 aa30.61■■■□□ 2.49
TNFRSF4-201ENST00000379236 WDR66Q8TBY9 1149 aa30.61■■■□□ 2.49
TNFRSF4-201ENST00000379236 ZNF70Q9UC06 446 aaPredicted RBP30.61■■■□□ 2.49
TNFRSF4-201ENST00000379236 TNNI2P48788 182 aa30.6■■■□□ 2.49
TNFRSF4-201ENST00000379236 HDLBPQ00341 1268 aaKnown RBP30.6■■■□□ 2.49
TNFRSF4-201ENST00000379236 TMEM57Q8N5G2 664 aa30.6■■■□□ 2.49
TNFRSF4-201ENST00000379236 SUGT1Q9Y2Z0 365 aa30.6■■■□□ 2.49
TNFRSF4-201ENST00000379236 AOX1Q06278 1338 aa30.59■■■□□ 2.49
TNFRSF4-201ENST00000379236 RASA3Q14644 834 aa30.59■■■□□ 2.49
TNFRSF4-201ENST00000379236 SAGE1Q9NXZ1 904 aa30.59■■■□□ 2.49
TNFRSF4-201ENST00000379236 MTX1Q13505 466 aa30.58■■■□□ 2.49
TNFRSF4-201ENST00000379236 GRIK5Q16478 980 aa30.58■■■□□ 2.49
TNFRSF4-201ENST00000379236 TMOD2Q9NZR1 351 aa30.58■■■□□ 2.49
TNFRSF4-201ENST00000379236 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.58■■■□□ 2.49
TNFRSF4-201ENST00000379236 CSRNP1Q96S65 589 aa30.57■■■□□ 2.48
TNFRSF4-201ENST00000379236 AKAP2Q9Y2D5 859 aa30.57■■■□□ 2.48
TNFRSF4-201ENST00000379236 TCP10L2B9ZVM9 353 aa30.56■■■□□ 2.48
TNFRSF4-201ENST00000379236 SSC5DA1L4H1 1573 aa30.55■■■□□ 2.48
TNFRSF4-201ENST00000379236 TRPA1O75762 1119 aa30.55■■■□□ 2.48
TNFRSF4-201ENST00000379236 IREB2P48200 963 aaKnown RBP30.55■■■□□ 2.48
TNFRSF4-201ENST00000379236 MKRN3Q13064 507 aaKnown RBP30.55■■■□□ 2.48
TNFRSF4-201ENST00000379236 NBPF12Q5TAG4 269 aaPredicted RBP30.55■■■□□ 2.48
TNFRSF4-201ENST00000379236 RNF186Q9NXI6 227 aa30.55■■■□□ 2.48
TNFRSF4-201ENST00000379236 DENND2AQ9ULE3 1009 aa30.55■■■□□ 2.48
TNFRSF4-201ENST00000379236 FZD1Q9UP38 647 aa30.55■■■□□ 2.48
TNFRSF4-201ENST00000379236 SEMA3EO15041 775 aa30.54■■■□□ 2.48
TNFRSF4-201ENST00000379236 AK9Q5TCS8 1911 aa30.53■■■□□ 2.48
TNFRSF4-201ENST00000379236 ITPRIPQ8IWB1 547 aa30.53■■■□□ 2.48
TNFRSF4-201ENST00000379236 SLC10A4Q96EP9 437 aa30.53■■■□□ 2.48
TNFRSF4-201ENST00000379236 MRIQ9BWK5 157 aa30.53■■■□□ 2.48
TNFRSF4-201ENST00000379236 OTOFQ9HC10 1997 aa30.53■■■□□ 2.48
TNFRSF4-201ENST00000379236 PHKA1P46020 1223 aa30.52■■■□□ 2.48
TNFRSF4-201ENST00000379236 SREBF2Q12772 1141 aa30.52■■■□□ 2.48
TNFRSF4-201ENST00000379236 TFCP2Q12800 502 aa30.52■■■□□ 2.48
TNFRSF4-201ENST00000379236 G3BP1Q13283 466 aaKnown RBP eCLIP30.52■■■□□ 2.48
TNFRSF4-201ENST00000379236 MAP3K11Q16584 847 aa30.52■■■□□ 2.48
TNFRSF4-201ENST00000379236 LDLRAD1Q5T700 205 aa30.52■■■□□ 2.48
TNFRSF4-201ENST00000379236 ZDHHC15Q96MV8 337 aa30.52■■■□□ 2.48
TNFRSF4-201ENST00000379236 HHIPL2Q6UWX4 724 aa30.51■■■□□ 2.47
TNFRSF4-201ENST00000379236 MYH2Q9UKX2 1941 aa30.51■■■□□ 2.47
TNFRSF4-201ENST00000379236 A0A1B0GUL7 405 aa30.5■■■□□ 2.47
TNFRSF4-201ENST00000379236 LDHBP07195 334 aaKnown RBP30.5■■■□□ 2.47
TNFRSF4-201ENST00000379236 ADORA1P30542 326 aa30.5■■■□□ 2.47
TNFRSF4-201ENST00000379236 TIMM10P62072 90 aa30.5■■■□□ 2.47
TNFRSF4-201ENST00000379236 CCDC102BQ68D86 513 aa30.5■■■□□ 2.47
TNFRSF4-201ENST00000379236 NEUROD6Q96NK8 337 aa30.5■■■□□ 2.47
TNFRSF4-201ENST00000379236 PNMA6EA0A0J9YXQ4 647 aa30.49■■■□□ 2.47
TNFRSF4-201ENST00000379236 MVPQ14764 893 aaKnown RBP30.49■■■□□ 2.47
TNFRSF4-201ENST00000379236 GORABQ5T7V8 394 aa30.49■■■□□ 2.47
TNFRSF4-201ENST00000379236 ZGPATQ8N5A5 531 aaKnown RBP30.49■■■□□ 2.47
TNFRSF4-201ENST00000379236 UNCXA6NJT0 531 aa30.48■■■□□ 2.47
TNFRSF4-201ENST00000379236 CACNB3P54284 484 aa30.48■■■□□ 2.47
TNFRSF4-201ENST00000379236 SPRYD7Q5W111 196 aa30.48■■■□□ 2.47
TNFRSF4-201ENST00000379236 TMEM39BQ9GZU3 492 aa30.48■■■□□ 2.47
TNFRSF4-201ENST00000379236 OS9Q13438 667 aaPredicted RBP30.47■■■□□ 2.47
TNFRSF4-201ENST00000379236 ANKRD13AQ8IZ07 590 aa30.47■■■□□ 2.47
TNFRSF4-201ENST00000379236 XAGE2Q96GT9 111 aa30.47■■■□□ 2.47
TNFRSF4-201ENST00000379236 SALL1Q9NSC2 1324 aa30.47■■■□□ 2.47
TNFRSF4-201ENST00000379236 LAMB1P07942 1786 aa30.46■■■□□ 2.47
TNFRSF4-201ENST00000379236 USP2O75604 605 aaPredicted RBP30.46■■■□□ 2.47
TNFRSF4-201ENST00000379236 PRDX5P30044 214 aa30.46■■■□□ 2.47
TNFRSF4-201ENST00000379236 APOBEC3HQ6NTF7 200 aaKnown RBP30.45■■■□□ 2.47
TNFRSF4-201ENST00000379236 CLMNQ96JQ2 1002 aa30.45■■■□□ 2.47
TNFRSF4-201ENST00000379236 C1orf115Q9H7X2 142 aa30.45■■■□□ 2.47
TNFRSF4-201ENST00000379236 ZBTB48P10074 688 aaPredicted RBP30.44■■■□□ 2.46
TNFRSF4-201ENST00000379236 TM4SF4P48230 202 aa30.44■■■□□ 2.46
TNFRSF4-201ENST00000379236 FAM83AQ86UY5 434 aa30.44■■■□□ 2.46
TNFRSF4-201ENST00000379236 HOOK2Q96ED9 719 aa30.44■■■□□ 2.46
TNFRSF4-201ENST00000379236 ABHD8Q96I13 439 aa30.44■■■□□ 2.46
TNFRSF4-201ENST00000379236 WNK4Q96J92 1243 aa30.44■■■□□ 2.46
TNFRSF4-201ENST00000379236 TEPSINQ96N21 525 aa30.44■■■□□ 2.46
TNFRSF4-201ENST00000379236 MANSC4A6NHS7 340 aaPredicted RBP30.43■■■□□ 2.46
TNFRSF4-201ENST00000379236 MS4A1P11836 297 aa30.43■■■□□ 2.46
TNFRSF4-201ENST00000379236 DGKZQ13574 1117 aa30.43■■■□□ 2.46
TNFRSF4-201ENST00000379236 RASGRF1Q13972 1273 aa30.43■■■□□ 2.46
TNFRSF4-201ENST00000379236 DIXDC1Q155Q3 683 aa30.43■■■□□ 2.46
TNFRSF4-201ENST00000379236 FKBP1CQ5VVH2 108 aa30.43■■■□□ 2.46
TNFRSF4-201ENST00000379236 DZIP1Q86YF9 867 aaKnown RBP30.43■■■□□ 2.46
TNFRSF4-201ENST00000379236 ABCF2Q9UG63 623 aa30.43■■■□□ 2.46
TNFRSF4-201ENST00000379236 RLBP1P12271 317 aa30.42■■■□□ 2.46
TNFRSF4-201ENST00000379236 SPTY2D1Q68D10 685 aaPredicted RBP30.42■■■□□ 2.46
TNFRSF4-201ENST00000379236 DAGLAQ9Y4D2 1042 aa30.42■■■□□ 2.46
TNFRSF4-201ENST00000379236 PDS5AQ29RF7 1337 aaKnown RBP30.42■■■□□ 2.46
TNFRSF4-201ENST00000379236 ATP8B2P98198 1209 aa30.41■■■□□ 2.46
TNFRSF4-201ENST00000379236 CDAN1Q8IWY9 1227 aa30.41■■■□□ 2.46
TNFRSF4-201ENST00000379236 SLF2Q8IX21 1173 aa30.41■■■□□ 2.46
TNFRSF4-201ENST00000379236 ZBTB22O15209 634 aa30.4■■■□□ 2.46
TNFRSF4-201ENST00000379236 INHBEP58166 350 aa30.4■■■□□ 2.46
TNFRSF4-201ENST00000379236 ELP3Q9H9T3 547 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms