RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PI4K2BQ8TCG2 481 aa16.36■□□□□ 0.21
SHROOM1-203ENST00000378679 LSG1Q9H089 658 aaKnown RBP16.36■□□□□ 0.21
SHROOM1-203ENST00000378679 PI16Q6UXB8 463 aa16.36■□□□□ 0.21
SHROOM1-203ENST00000378679 SMTNL1A8MU46 457 aa16.36■□□□□ 0.21
SHROOM1-203ENST00000378679 KCNQ2O43526 872 aa16.36■□□□□ 0.21
SHROOM1-203ENST00000378679 GNAQP50148 359 aa16.36■□□□□ 0.21
SHROOM1-203ENST00000378679 CCDC12Q8WUD4 166 aaPredicted RBP16.36■□□□□ 0.21
SHROOM1-203ENST00000378679 MAP4K1Q92918 833 aa16.36■□□□□ 0.21
SHROOM1-203ENST00000378679 FEZ1Q99689 392 aa16.36■□□□□ 0.21
SHROOM1-203ENST00000378679 NRKQ7Z2Y5 1582 aa16.36■□□□□ 0.21
SHROOM1-203ENST00000378679 OFD1O75665 1012 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 SUSD4Q5VX71 490 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 KCNG4Q8TDN1 519 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 TMEM87BQ96K49 555 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 SSH2Q76I76 1423 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 IQSEC2Q5JU85 1478 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 SPDYE4A6NLX3 237 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 CD2BP2O95400 341 aaKnown RBP16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 CFAP100Q494V2 611 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 ISM2Q6H9L7 571 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 CTDSPL2Q05D32 466 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 ME3Q16798 604 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 ADCK5Q3MIX3 580 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 CEP89Q96ST8 783 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 SRP68Q9UHB9 627 aaKnown RBP16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 FGAP02671 866 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 SAP30BPQ9UHR5 308 aaKnown RBP16.35■□□□□ 0.21
SHROOM1-203ENST00000378679 JAK2O60674 1132 aa16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 DPP8Q6V1X1 898 aaPredicted RBP16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 ZNF589Q86UQ0 364 aaPredicted RBP16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 SOS2Q07890 1332 aaPredicted RBP16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 CYP19A1P11511 503 aaPredicted RBP16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 OTUD7BQ6GQQ9 843 aa16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 MYL10Q9BUA6 226 aa16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 UBA7P41226 1012 aa16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 PDE4CQ08493 712 aa16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 ERFEQ4G0M1 354 aa16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 LRSAM1Q6UWE0 723 aa16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 ZSWIM6Q9HCJ5 1215 aa16.34■□□□□ 0.21
SHROOM1-203ENST00000378679 CALM1P0DP23 149 aa16.33■□□□□ 0.21
SHROOM1-203ENST00000378679 CALM2P0DP24 149 aa16.33■□□□□ 0.21
SHROOM1-203ENST00000378679 CALM3P0DP25 149 aa16.33■□□□□ 0.21
SHROOM1-203ENST00000378679 SYKP43405 635 aa16.33■□□□□ 0.21
SHROOM1-203ENST00000378679 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.21
SHROOM1-203ENST00000378679 SPTLC2O15270 562 aa16.33■□□□□ 0.2
SHROOM1-203ENST00000378679 MRPS27Q92552 414 aaKnown RBP16.33■□□□□ 0.2
SHROOM1-203ENST00000378679 ARHGEF28Q8N1W1 1705 aaKnown RBP16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 MYO1BO43795 1136 aa16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 PPFIBP1Q86W92 1011 aa16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 HDAC9Q9UKV0 1011 aa16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 H0YIN7 160 aa16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 SNAP23O00161 211 aa16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 UBE4AQ14139 1066 aa16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 CEMIPQ8WUJ3 1361 aa16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 RAB34Q9BZG1 259 aa16.32■□□□□ 0.2
SHROOM1-203ENST00000378679 RTL9Q8NET4 1388 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 USP17L12C9JPN9 530 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 USP17L21D6R901 530 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 CBFA2T2O43439 604 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 PKP1Q13835 747 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 ZMYM1Q5SVZ6 1142 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 TCP11L1Q9NUJ3 509 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 LLPHQ9BRT6 129 aaKnown RBP16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 VEZTQ9HBM0 779 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 CYP21A2P08686 494 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 NAP1L1P55209 391 aaKnown RBP16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 SDR42E1Q8WUS8 393 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 TRERF1Q96PN7 1200 aa16.31■□□□□ 0.2
SHROOM1-203ENST00000378679 TRIM75PA6NK02 468 aa16.3■□□□□ 0.2
SHROOM1-203ENST00000378679 IFNL3Q8IZI9 196 aa16.3■□□□□ 0.2
SHROOM1-203ENST00000378679 SMARCE1Q969G3 411 aa16.3■□□□□ 0.2
SHROOM1-203ENST00000378679 ARHGAP23Q9P227 1491 aa16.3■□□□□ 0.2
SHROOM1-203ENST00000378679 TMEM266Q2M3C6 531 aa16.3■□□□□ 0.2
SHROOM1-203ENST00000378679 JDP2Q8WYK2 163 aa16.3■□□□□ 0.2
SHROOM1-203ENST00000378679 PHKBQ93100 1093 aa16.3■□□□□ 0.2
SHROOM1-203ENST00000378679 ISCA1Q9BUE6 129 aa16.3■□□□□ 0.2
SHROOM1-203ENST00000378679 POLD1P28340 1107 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 GTF2IP78347 998 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 UBE3CQ15386 1083 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 STX1AQ16623 288 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 TANGO6Q9C0B7 1094 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 AFF2P51816 1311 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 BRD1O95696 1058 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 NAPAP54920 295 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 MFSD14BQ5SR56 506 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 RBM26Q5T8P6 1007 aaKnown RBP16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 MAPKAPK5Q8IW41 473 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 NLGN1Q8N2Q7 840 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 CCDC148Q8NFR7 591 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 REREQ9P2R6 1566 aa16.29■□□□□ 0.2
SHROOM1-203ENST00000378679 USP32Q8NFA0 1604 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms