RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 ZBTB38Q8NAP3 1195 aaPredicted RBP22.43■■□□□ 1.18
PCDH8-202ENST00000377942 WDR17Q8IZU2 1322 aa22.43■■□□□ 1.18
PCDH8-202ENST00000377942 CASQ1P31415 396 aa22.42■■□□□ 1.18
PCDH8-202ENST00000377942 ANGEL1Q9UNK9 670 aaKnown RBP22.42■■□□□ 1.18
PCDH8-202ENST00000377942 TAF5LO75529 589 aa22.42■■□□□ 1.18
PCDH8-202ENST00000377942 HOOK2Q96ED9 719 aa22.42■■□□□ 1.18
PCDH8-202ENST00000377942 TRPC5Q9UL62 973 aaPredicted RBP22.42■■□□□ 1.18
PCDH8-202ENST00000377942 GLT8D2Q9H1C3 349 aa22.42■■□□□ 1.18
PCDH8-202ENST00000377942 B4E1Z4 1266 aa22.42■■□□□ 1.18
PCDH8-202ENST00000377942 IBTKQ9P2D0 1353 aaPredicted RBP22.42■■□□□ 1.18
PCDH8-202ENST00000377942 DEXIO95424 95 aa22.41■■□□□ 1.18
PCDH8-202ENST00000377942 ASIC1P78348 528 aa22.41■■□□□ 1.18
PCDH8-202ENST00000377942 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.41■■□□□ 1.18
PCDH8-202ENST00000377942 ERCC6L2Q5T890 1561 aa22.41■■□□□ 1.18
PCDH8-202ENST00000377942 BEND3Q5T5X7 828 aa22.41■■□□□ 1.18
PCDH8-202ENST00000377942 TRMT1LQ7Z2T5 733 aaKnown RBP22.41■■□□□ 1.18
PCDH8-202ENST00000377942 MCM3P25205 808 aa22.41■■□□□ 1.18
PCDH8-202ENST00000377942 ISM2Q6H9L7 571 aa22.41■■□□□ 1.18
PCDH8-202ENST00000377942 CCDC129Q6ZRS4 1044 aa22.41■■□□□ 1.18
PCDH8-202ENST00000377942 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.41■■□□□ 1.18
PCDH8-202ENST00000377942 PRR36Q9H6K5 1346 aa22.41■■□□□ 1.18
PCDH8-202ENST00000377942 ALS2CR12Q96Q35 445 aa22.4■■□□□ 1.18
PCDH8-202ENST00000377942 BICD1Q96G01 975 aa22.4■■□□□ 1.18
PCDH8-202ENST00000377942 UQCRHLA0A096LP55 91 aa22.4■■□□□ 1.18
PCDH8-202ENST00000377942 UQCRHP07919 91 aa22.4■■□□□ 1.18
PCDH8-202ENST00000377942 PLA2R1Q13018 1463 aa22.4■■□□□ 1.18
PCDH8-202ENST00000377942 DTHD1Q6ZMT9 781 aa22.4■■□□□ 1.18
PCDH8-202ENST00000377942 RILPL1Q5EBL4 403 aa22.39■■□□□ 1.18
PCDH8-202ENST00000377942 LARGE2Q8N3Y3 721 aa22.39■■□□□ 1.18
PCDH8-202ENST00000377942 ARHGEF10LQ9HCE6 1279 aa22.39■■□□□ 1.18
PCDH8-202ENST00000377942 ENOX2Q16206 610 aaKnown RBP22.39■■□□□ 1.18
PCDH8-202ENST00000377942 LEKR1Q6ZMV7 388 aa22.39■■□□□ 1.18
PCDH8-202ENST00000377942 PDCL2Q8N4E4 241 aa22.39■■□□□ 1.18
PCDH8-202ENST00000377942 SNX14Q9Y5W7 946 aa22.39■■□□□ 1.18
PCDH8-202ENST00000377942 MAP3K15Q6ZN16 1313 aa22.39■■□□□ 1.17
PCDH8-202ENST00000377942 URI1O94763 535 aaPredicted RBP22.39■■□□□ 1.17
PCDH8-202ENST00000377942 FAM227BQ96M60 508 aa22.39■■□□□ 1.17
PCDH8-202ENST00000377942 LOC102724428A0A0B4J2F2 783 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 PATL2C9JE40 543 aaKnown RBP22.38■■□□□ 1.17
PCDH8-202ENST00000377942 SIK1P57059 783 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 UBASH3AP57075 661 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 DSCC1Q9BVC3 393 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 IQGAP3Q86VI3 1631 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 KRT13P13646 458 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 ZAP70P43403 619 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 SAP30BPQ9UHR5 308 aaKnown RBP22.38■■□□□ 1.17
PCDH8-202ENST00000377942 MYCNP04198 464 aaPredicted RBP22.38■■□□□ 1.17
PCDH8-202ENST00000377942 SYT1P21579 422 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 EIF6P56537 245 aaKnown RBP22.38■■□□□ 1.17
PCDH8-202ENST00000377942 TTLL7Q6ZT98 887 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 DHX58Q96C10 678 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 IQUBQ8NA54 791 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 ERBB3P21860 1342 aa22.38■■□□□ 1.17
PCDH8-202ENST00000377942 IL6STP40189 918 aaPredicted RBP22.37■■□□□ 1.17
PCDH8-202ENST00000377942 ZKSCAN3Q9BRR0 538 aa22.37■■□□□ 1.17
PCDH8-202ENST00000377942 MAP3K4Q9Y6R4 1608 aa22.37■■□□□ 1.17
PCDH8-202ENST00000377942 MAP9Q49MG5 647 aa22.37■■□□□ 1.17
PCDH8-202ENST00000377942 ANO6Q4KMQ2 910 aa22.37■■□□□ 1.17
PCDH8-202ENST00000377942 USP8P40818 1118 aa22.37■■□□□ 1.17
PCDH8-202ENST00000377942 EHBP1Q8NDI1 1231 aa22.36■■□□□ 1.17
PCDH8-202ENST00000377942 ZRSR2Q15696 482 aaKnown RBP22.36■■□□□ 1.17
PCDH8-202ENST00000377942 ZNF532Q9HCE3 1301 aa22.36■■□□□ 1.17
PCDH8-202ENST00000377942 RXRAP19793 462 aa22.36■■□□□ 1.17
PCDH8-202ENST00000377942 TM6SF1Q9BZW5 370 aa22.36■■□□□ 1.17
PCDH8-202ENST00000377942 IFI16Q16666 785 aaKnown RBP22.35■■□□□ 1.17
PCDH8-202ENST00000377942 SPAG5Q96R06 1193 aa22.35■■□□□ 1.17
PCDH8-202ENST00000377942 LZTS2Q9BRK4 669 aa22.35■■□□□ 1.17
PCDH8-202ENST00000377942 CDK12Q9NYV4 1490 aaPredicted RBP22.35■■□□□ 1.17
PCDH8-202ENST00000377942 SEC24BO95487 1268 aa22.35■■□□□ 1.17
PCDH8-202ENST00000377942 PLS1Q14651 629 aa22.35■■□□□ 1.17
PCDH8-202ENST00000377942 LUZP1Q86V48 1076 aa22.35■■□□□ 1.17
PCDH8-202ENST00000377942 AATFQ9NY61 560 aaKnown RBP eCLIP22.35■■□□□ 1.17
PCDH8-202ENST00000377942 CDC42BPAQ5VT25 1732 aa22.35■■□□□ 1.17
PCDH8-202ENST00000377942 BICDL2A1A5D9 508 aa22.35■■□□□ 1.17
PCDH8-202ENST00000377942 GJA3Q9Y6H8 435 aa22.35■■□□□ 1.17
PCDH8-202ENST00000377942 TNNT1P13805 278 aa22.35■■□□□ 1.17
PCDH8-202ENST00000377942 MCM7P33993 719 aa22.34■■□□□ 1.17
PCDH8-202ENST00000377942 ATP2B4P23634 1241 aa22.34■■□□□ 1.17
PCDH8-202ENST00000377942 TRMT2AQ8IZ69 625 aaKnown RBP22.34■■□□□ 1.17
PCDH8-202ENST00000377942 TBC1D5Q92609 795 aa22.34■■□□□ 1.17
PCDH8-202ENST00000377942 AKR1B10O60218 316 aa22.34■■□□□ 1.17
PCDH8-202ENST00000377942 FERMT2Q96AC1 680 aa22.34■■□□□ 1.17
PCDH8-202ENST00000377942 CRACR2AQ9BSW2 395 aa22.34■■□□□ 1.17
PCDH8-202ENST00000377942 PICK1Q9NRD5 415 aa22.34■■□□□ 1.17
PCDH8-202ENST00000377942 TMCO3Q6UWJ1 677 aa22.34■■□□□ 1.17
PCDH8-202ENST00000377942 WWC3Q9ULE0 1092 aa22.34■■□□□ 1.17
PCDH8-202ENST00000377942 NLGN1Q8N2Q7 840 aa22.33■■□□□ 1.17
PCDH8-202ENST00000377942 COPRSQ9NQ92 184 aa22.33■■□□□ 1.17
PCDH8-202ENST00000377942 GIGYF2Q6Y7W6 1299 aaKnown RBP22.33■■□□□ 1.17
PCDH8-202ENST00000377942 H0YHG0 523 aa22.33■■□□□ 1.17
PCDH8-202ENST00000377942 GBP2P32456 591 aaPredicted RBP22.33■■□□□ 1.17
PCDH8-202ENST00000377942 PPP1R2P41236 205 aa22.33■■□□□ 1.17
PCDH8-202ENST00000377942 NAA15Q9BXJ9 866 aaKnown RBP22.33■■□□□ 1.17
PCDH8-202ENST00000377942 CENPHQ9H3R5 247 aa22.33■■□□□ 1.17
PCDH8-202ENST00000377942 A2ML1A8K2U0 1454 aa22.33■■□□□ 1.17
PCDH8-202ENST00000377942 CPA1P15085 419 aa22.33■■□□□ 1.16
PCDH8-202ENST00000377942 CYLC1P35663 651 aaPredicted RBP22.33■■□□□ 1.16
PCDH8-202ENST00000377942 HSPA4P34932 840 aa22.32■■□□□ 1.16
PCDH8-202ENST00000377942 HS2ST1Q7LGA3 356 aa22.32■■□□□ 1.16
PCDH8-202ENST00000377942 NIM1KQ8IY84 436 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms