RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 KIF13BQ9NQT8 1826 aa17.62■□□□□ 0.41
POLR1E-202ENST00000377798 AK2P54819 239 aa17.62■□□□□ 0.41
POLR1E-202ENST00000377798 IMMTQ16891 758 aaKnown RBP17.62■□□□□ 0.41
POLR1E-202ENST00000377798 TTLL5Q6EMB2 1281 aa17.62■□□□□ 0.41
POLR1E-202ENST00000377798 NAA16Q6N069 864 aaPredicted RBP17.62■□□□□ 0.41
POLR1E-202ENST00000377798 NSUN4Q96CB9 384 aaKnown RBP17.62■□□□□ 0.41
POLR1E-202ENST00000377798 NEK1Q96PY6 1258 aa17.62■□□□□ 0.41
POLR1E-202ENST00000377798 PDRG1Q9NUG6 133 aa17.62■□□□□ 0.41
POLR1E-202ENST00000377798 GNAT2P19087 354 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 RPS6KB1P23443 525 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 PRDX5P30044 214 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 SPTY2D1Q68D10 685 aaPredicted RBP17.61■□□□□ 0.41
POLR1E-202ENST00000377798 ADGRA1Q86SQ6 560 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 ZNF384Q8TF68 577 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 ARMT1Q9H993 441 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 JAG2Q9Y219 1238 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 ZMYM6O95789 1325 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 MECOMQ03112 1051 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 STOX1Q6ZVD7 989 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 NOL8Q76FK4 1167 aaKnown RBP17.61■□□□□ 0.41
POLR1E-202ENST00000377798 LCORLQ8N3X6 602 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 MIGA1Q8NAN2 632 aa17.61■□□□□ 0.41
POLR1E-202ENST00000377798 GOLGB1Q14789 3259 aaKnown RBP17.6■□□□□ 0.41
POLR1E-202ENST00000377798 A0A0G2JLW4 131 aa17.6■□□□□ 0.41
POLR1E-202ENST00000377798 PATL2C9JE40 543 aaKnown RBP17.6■□□□□ 0.41
POLR1E-202ENST00000377798 APPP05067 770 aa17.6■□□□□ 0.41
POLR1E-202ENST00000377798 DDIT3P35638 169 aa17.6■□□□□ 0.41
POLR1E-202ENST00000377798 MAGEB6P1A0A0J9YX57 407 aa17.59■□□□□ 0.41
POLR1E-202ENST00000377798 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
POLR1E-202ENST00000377798 COL9A3Q14050 684 aaPredicted RBP17.59■□□□□ 0.41
POLR1E-202ENST00000377798 ALX1Q15699 326 aa17.59■□□□□ 0.41
POLR1E-202ENST00000377798 ZC3H12CQ9C0D7 883 aaKnown RBP17.59■□□□□ 0.41
POLR1E-202ENST00000377798 COA1Q9GZY4 146 aa17.59■□□□□ 0.41
POLR1E-202ENST00000377798 ALDH8A1Q9H2A2 487 aaPredicted RBP17.59■□□□□ 0.41
POLR1E-202ENST00000377798 FOXD4L1Q9NU39 408 aa17.59■□□□□ 0.41
POLR1E-202ENST00000377798 E7EWF7 191 aa17.58■□□□□ 0.41
POLR1E-202ENST00000377798 ZNF213O14771 459 aa17.58■□□□□ 0.41
POLR1E-202ENST00000377798 CUL4AQ13619 759 aa17.58■□□□□ 0.41
POLR1E-202ENST00000377798 DZIP1Q86YF9 867 aaKnown RBP17.58■□□□□ 0.41
POLR1E-202ENST00000377798 UPF1Q92900 1129 aaKnown RBP eCLIP17.58■□□□□ 0.414e-14■■■■■ 42.3
POLR1E-202ENST00000377798 RIOK1Q9BRS2 568 aaKnown RBP17.58■□□□□ 0.41
POLR1E-202ENST00000377798 LIMCH1Q9UPQ0 1083 aa17.58■□□□□ 0.41
POLR1E-202ENST00000377798 CHD4Q14839 1912 aa17.58■□□□□ 0.4
POLR1E-202ENST00000377798 RIMBP2O15034 1052 aa17.58■□□□□ 0.4
POLR1E-202ENST00000377798 ZBTB7AO95365 584 aa17.58■□□□□ 0.4
POLR1E-202ENST00000377798 LDHBP07195 334 aaKnown RBP17.58■□□□□ 0.4
POLR1E-202ENST00000377798 HAND2P61296 217 aa17.58■□□□□ 0.4
POLR1E-202ENST00000377798 EYA3Q99504 573 aa17.58■□□□□ 0.4
POLR1E-202ENST00000377798 MTFR1LQ9H019 292 aa17.58■□□□□ 0.4
POLR1E-202ENST00000377798 EPB41L4AQ9HCS5 686 aaPredicted RBP17.58■□□□□ 0.4
POLR1E-202ENST00000377798 CHMP5Q9NZZ3 219 aa17.58■□□□□ 0.4
POLR1E-202ENST00000377798 SLC4A4Q9Y6R1 1079 aa17.58■□□□□ 0.4
POLR1E-202ENST00000377798 GSG1L2A8MUP6 293 aa17.57■□□□□ 0.4
POLR1E-202ENST00000377798 ANKRD1Q15327 319 aa17.57■□□□□ 0.4
POLR1E-202ENST00000377798 IFNL3Q8IZI9 196 aa17.57■□□□□ 0.4
POLR1E-202ENST00000377798 C7orf43Q8WVR3 580 aa17.57■□□□□ 0.4
POLR1E-202ENST00000377798 NACAP1Q9BZK3 213 aa17.57■□□□□ 0.4
POLR1E-202ENST00000377798 CIZ1Q9ULV3 898 aaPredicted RBP17.57■□□□□ 0.4
POLR1E-202ENST00000377798 SNED1Q8TER0 1413 aa17.57■□□□□ 0.4
POLR1E-202ENST00000377798 NAPBQ9H115 298 aa17.56■□□□□ 0.4
POLR1E-202ENST00000377798 FAM205AQ6ZU69 1335 aa17.56■□□□□ 0.4
POLR1E-202ENST00000377798 PRKAB2O43741 272 aa17.56■□□□□ 0.4
POLR1E-202ENST00000377798 CC2D2BQ6DHV5 1058 aa17.56■□□□□ 0.4
POLR1E-202ENST00000377798 TBC1D22AQ8WUA7 517 aa17.56■□□□□ 0.4
POLR1E-202ENST00000377798 INTS4Q96HW7 963 aaKnown RBP17.56■□□□□ 0.4
POLR1E-202ENST00000377798 TCEANC2Q96MN5 208 aa17.56■□□□□ 0.4
POLR1E-202ENST00000377798 TIAM2Q8IVF5 1701 aa17.55■□□□□ 0.4
POLR1E-202ENST00000377798 POLD1P28340 1107 aa17.55■□□□□ 0.4
POLR1E-202ENST00000377798 DYNLL1P63167 89 aaKnown RBP17.55■□□□□ 0.4
POLR1E-202ENST00000377798 R3HDM1Q15032 1099 aaKnown RBP17.55■□□□□ 0.4
POLR1E-202ENST00000377798 DHX32Q7L7V1 743 aaKnown RBP17.55■□□□□ 0.4
POLR1E-202ENST00000377798 ZSCAN31Q96LW9 406 aaPredicted RBP17.55■□□□□ 0.4
POLR1E-202ENST00000377798 RTFDC1Q9BY42 306 aaPredicted RBP17.55■□□□□ 0.4
POLR1E-202ENST00000377798 CWC22Q9HCG8 908 aaKnown RBP17.55■□□□□ 0.4
POLR1E-202ENST00000377798 TDO2P48775 406 aa17.54■□□□□ 0.4
POLR1E-202ENST00000377798 GSTO1P78417 241 aa17.54■□□□□ 0.4
POLR1E-202ENST00000377798 TOB2Q14106 344 aaPredicted RBP17.54■□□□□ 0.4
POLR1E-202ENST00000377798 TTLL6Q8N841 843 aa17.54■□□□□ 0.4
POLR1E-202ENST00000377798 LARP6Q9BRS8 491 aaKnown RBP17.54■□□□□ 0.4
POLR1E-202ENST00000377798 NBPF3Q9H094 633 aa17.54■□□□□ 0.4
POLR1E-202ENST00000377798 SH2B1Q9NRF2 756 aaPredicted RBP17.54■□□□□ 0.4
POLR1E-202ENST00000377798 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
POLR1E-202ENST00000377798 ATF5Q9Y2D1 282 aaPredicted RBP17.54■□□□□ 0.4
POLR1E-202ENST00000377798 MYH2Q9UKX2 1941 aa17.54■□□□□ 0.4
POLR1E-202ENST00000377798 GRIK5Q16478 980 aa17.54■□□□□ 0.4
POLR1E-202ENST00000377798 MFSD14BQ5SR56 506 aa17.54■□□□□ 0.4
POLR1E-202ENST00000377798 AATFQ9NY61 560 aaKnown RBP eCLIP17.54■□□□□ 0.4
POLR1E-202ENST00000377798 DPEP1P16444 411 aa17.53■□□□□ 0.4
POLR1E-202ENST00000377798 KCNA3P22001 575 aa17.53■□□□□ 0.4
POLR1E-202ENST00000377798 EXOSC10Q01780 885 aaKnown RBP17.53■□□□□ 0.4
POLR1E-202ENST00000377798 Q6ZUG5 572 aa17.53■□□□□ 0.4
POLR1E-202ENST00000377798 NCOA7Q8NI08 942 aa17.53■□□□□ 0.4
POLR1E-202ENST00000377798 SDR42E1Q8WUS8 393 aa17.53■□□□□ 0.4
POLR1E-202ENST00000377798 LARGE1O95461 756 aa17.52■□□□□ 0.4
POLR1E-202ENST00000377798 GTF2IP78347 998 aa17.52■□□□□ 0.4
POLR1E-202ENST00000377798 DOK7Q18PE1 504 aa17.52■□□□□ 0.4
POLR1E-202ENST00000377798 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
POLR1E-202ENST00000377798 TBC1D10CQ8IV04 446 aa17.52■□□□□ 0.4
POLR1E-202ENST00000377798 TPCN1Q9ULQ1 816 aa17.52■□□□□ 0.4
POLR1E-202ENST00000377798 G3V3G9 751 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms