RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CASZ1Q86V15 1759 aa14.32□□□□□ -0.12
UBR4-203ENST00000375225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.31□□□□□ -0.12
UBR4-203ENST00000375225 CDKL5O76039 1030 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 GTF2E1P29083 439 aaPredicted RBP14.31□□□□□ -0.12
UBR4-203ENST00000375225 UBE3CQ15386 1083 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 TBC1D9BQ66K14 1250 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 BICDL1Q6ZP65 573 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 CCDC73Q6ZRK6 1079 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 SYNE4Q8N205 404 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 OSBP2Q969R2 916 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 DDX11Q96FC9 970 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 BCL2L12Q9HB09 334 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 PDIA3P30101 505 aaKnown RBP14.31□□□□□ -0.12
UBR4-203ENST00000375225 ZAP70P43403 619 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 TYRO3Q06418 890 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 CCDC152Q4G0S7 254 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 CCDC85AQ96PX6 553 aaPredicted RBP14.31□□□□□ -0.12
UBR4-203ENST00000375225 ANO8Q9HCE9 1232 aaPredicted RBP14.31□□□□□ -0.12
UBR4-203ENST00000375225 DACT1Q9NYF0 836 aa14.31□□□□□ -0.12
UBR4-203ENST00000375225 CARMIL3Q8ND23 1372 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 RIC1Q4ADV7 1423 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 CPLX1O14810 134 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 PDE8BO95263 885 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 SLC5A1P13866 664 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 ADORA1P30542 326 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 PUM3Q15397 648 aaKnown RBP14.3□□□□□ -0.12
UBR4-203ENST00000375225 RBM43Q6ZSC3 357 aaKnown RBP14.3□□□□□ -0.12
UBR4-203ENST00000375225 SMIM5Q71RC9 77 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 NBPF5PQ86XG9 351 aaPredicted RBP14.3□□□□□ -0.12
UBR4-203ENST00000375225 LPIN2Q92539 896 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 LRRC2Q9BYS8 371 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 GREM2Q9H772 168 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
UBR4-203ENST00000375225 RCOR1Q9UKL0 485 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 RTL9Q8NET4 1388 aa14.3□□□□□ -0.12
UBR4-203ENST00000375225 LRP5O75197 1615 aa14.29□□□□□ -0.12
UBR4-203ENST00000375225 NPHP1O15259 732 aa14.29□□□□□ -0.12
UBR4-203ENST00000375225 GPAA1O43292 621 aa14.29□□□□□ -0.12
UBR4-203ENST00000375225 PRC1O43663 620 aa14.29□□□□□ -0.12
UBR4-203ENST00000375225 LIG1P18858 919 aa14.29□□□□□ -0.12
UBR4-203ENST00000375225 ADD2P35612 726 aa14.29□□□□□ -0.12
UBR4-203ENST00000375225 TPTE2Q6XPS3 522 aa14.29□□□□□ -0.12
UBR4-203ENST00000375225 BRAPQ7Z569 592 aa14.29□□□□□ -0.12
UBR4-203ENST00000375225 AMIGO3Q86WK7 504 aa14.29□□□□□ -0.12
UBR4-203ENST00000375225 PROM2Q8N271 834 aa14.29□□□□□ -0.12
UBR4-203ENST00000375225 SALL1Q9NSC2 1324 aa14.29□□□□□ -0.12
UBR4-203ENST00000375225 ARAP2Q8WZ64 1704 aa14.28□□□□□ -0.12
UBR4-203ENST00000375225 ZMYM6O95789 1325 aa14.28□□□□□ -0.12
UBR4-203ENST00000375225 FGAP02671 866 aa14.28□□□□□ -0.12
UBR4-203ENST00000375225 ARID4AP29374 1257 aaPredicted RBP14.28□□□□□ -0.12
UBR4-203ENST00000375225 CCT2P78371 535 aaKnown RBP14.28□□□□□ -0.12
UBR4-203ENST00000375225 PLCB2Q00722 1185 aa14.28□□□□□ -0.12
UBR4-203ENST00000375225 ERFEQ4G0M1 354 aa14.28□□□□□ -0.12
UBR4-203ENST00000375225 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.28□□□□□ -0.12
UBR4-203ENST00000375225 FLAD1Q8NFF5 587 aa14.28□□□□□ -0.12
UBR4-203ENST00000375225 C8orf76Q96K31 380 aa14.28□□□□□ -0.12
UBR4-203ENST00000375225 TFCP2L1Q9NZI6 479 aa14.28□□□□□ -0.12
UBR4-203ENST00000375225 KINO60870 393 aaKnown RBP14.27□□□□□ -0.12
UBR4-203ENST00000375225 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.12
UBR4-203ENST00000375225 MB21D2Q8IYB1 491 aaPredicted RBP14.27□□□□□ -0.12
UBR4-203ENST00000375225 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.27□□□□□ -0.12
UBR4-203ENST00000375225 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.27□□□□□ -0.12
UBR4-203ENST00000375225 KLF18A0A0U1RQI7 1052 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 GOLGA8BA8MQT2 603 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 GOLGA6L19H0YKK7 550 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 CHGBP05060 677 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 GNAT2P19087 354 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
UBR4-203ENST00000375225 MAP3K12Q12852 859 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 SLC10A5Q5PT55 438 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 SLC9C2Q5TAH2 1124 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 FAM173BQ6P4H8 233 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 KCNG4Q8TDN1 519 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 PIBF1Q8WXW3 757 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 TMEM87BQ96K49 555 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 MPHOSPH8Q99549 860 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 MRVI1Q9Y6F6 885 aa14.26□□□□□ -0.13
UBR4-203ENST00000375225 CTDNEP1O95476 244 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 YEATS4O95619 227 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 MCAMP43121 646 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 COL9A3Q14050 684 aaPredicted RBP14.25□□□□□ -0.13
UBR4-203ENST00000375225 ZRSR1Q15695 479 aaKnown RBP14.25□□□□□ -0.13
UBR4-203ENST00000375225 ALX1Q15699 326 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 STX1AQ16623 288 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 CCAR1Q8IX12 1150 aaKnown RBP14.25□□□□□ -0.13
UBR4-203ENST00000375225 VGLL2Q8N8G2 317 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 AKT1S1Q96B36 256 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 AIDAQ96BJ3 306 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 NLRP3Q96P20 1036 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 CDC5LQ99459 802 aaKnown RBP14.25□□□□□ -0.13
UBR4-203ENST00000375225 NAT10Q9H0A0 1025 aaKnown RBP14.25□□□□□ -0.13
UBR4-203ENST00000375225 CNNM2Q9H8M5 875 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 AKAP11Q9UKA4 1901 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 IDH1O75874 414 aaKnown RBP14.25□□□□□ -0.13
UBR4-203ENST00000375225 APPP05067 770 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 GYS1P13807 737 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 FAM160A1Q05DH4 1040 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 NFIXQ14938 502 aa14.25□□□□□ -0.13
UBR4-203ENST00000375225 SF3B3Q15393 1217 aaKnown RBP14.25□□□□□ -0.13
UBR4-203ENST00000375225 SF3A1Q15459 793 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms