RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 GYG1P46976 350 aa21.05■□□□□ 0.96
CTSA-204ENST00000372484 SEPT12Q8IYM1 358 aa21.05■□□□□ 0.96
CTSA-204ENST00000372484 GNL3LQ9NVN8 582 aaKnown RBP21.05■□□□□ 0.96
CTSA-204ENST00000372484 TRPC5Q9UL62 973 aaPredicted RBP21.05■□□□□ 0.96
CTSA-204ENST00000372484 ZNF804BA4D1E1 1349 aa21.05■□□□□ 0.96
CTSA-204ENST00000372484 PATL2C9JE40 543 aaKnown RBP21.05■□□□□ 0.96
CTSA-204ENST00000372484 ANTXR2P58335 489 aa21.05■□□□□ 0.96
CTSA-204ENST00000372484 TBC1D10CQ8IV04 446 aa21.05■□□□□ 0.96
CTSA-204ENST00000372484 RBSNQ9H1K0 784 aa21.05■□□□□ 0.96
CTSA-204ENST00000372484 C4BP0C0L5 1744 aa21.05■□□□□ 0.96
CTSA-204ENST00000372484 WDR19Q8NEZ3 1342 aa21.04■□□□□ 0.96
CTSA-204ENST00000372484 WTIPA6NIX2 430 aaPredicted RBP21.04■□□□□ 0.96
CTSA-204ENST00000372484 RFC4P35249 363 aa21.04■□□□□ 0.96
CTSA-204ENST00000372484 ALX1Q15699 326 aa21.04■□□□□ 0.96
CTSA-204ENST00000372484 CAVIN4Q5BKX8 364 aa21.04■□□□□ 0.96
CTSA-204ENST00000372484 ARMT1Q9H993 441 aa21.04■□□□□ 0.96
CTSA-204ENST00000372484 RPS8P62241 208 aaKnown RBP21.04■□□□□ 0.96
CTSA-204ENST00000372484 VPS37DQ86XT2 251 aa21.04■□□□□ 0.96
CTSA-204ENST00000372484 CCDC24Q8N4L8 307 aa21.04■□□□□ 0.96
CTSA-204ENST00000372484 ZMYM6O95789 1325 aa21.03■□□□□ 0.96
CTSA-204ENST00000372484 KLF18A0A0U1RQI7 1052 aa21.03■□□□□ 0.96
CTSA-204ENST00000372484 NPHP1O15259 732 aa21.03■□□□□ 0.96
CTSA-204ENST00000372484 TRAPPC3LQ5T215 181 aa21.03■□□□□ 0.96
CTSA-204ENST00000372484 CCDC183Q5T5S1 534 aa21.03■□□□□ 0.96
CTSA-204ENST00000372484 IFNL3Q8IZI9 196 aa21.03■□□□□ 0.96
CTSA-204ENST00000372484 ANP32BQ92688 251 aaKnown RBP21.03■□□□□ 0.96
CTSA-204ENST00000372484 NAPBQ9H115 298 aa21.03■□□□□ 0.96
CTSA-204ENST00000372484 C4AP0C0L4 1744 aa21.03■□□□□ 0.96
CTSA-204ENST00000372484 SALL1Q9NSC2 1324 aa21.03■□□□□ 0.96
CTSA-204ENST00000372484 TTC6Q86TZ1 520 aa21.02■□□□□ 0.96
CTSA-204ENST00000372484 SCAND2PQ9GZW5 306 aaPredicted RBP21.02■□□□□ 0.96
CTSA-204ENST00000372484 RTN4Q9NQC3 1192 aaKnown RBP21.02■□□□□ 0.96
CTSA-204ENST00000372484 ZSCAN16Q9H4T2 348 aaPredicted RBP21.02■□□□□ 0.96
CTSA-204ENST00000372484 EPB41L4AQ9HCS5 686 aaPredicted RBP21.02■□□□□ 0.96
CTSA-204ENST00000372484 ABCF2Q9UG63 623 aa21.02■□□□□ 0.96
CTSA-204ENST00000372484 DENND2AQ9ULE3 1009 aa21.02■□□□□ 0.96
CTSA-204ENST00000372484 ELP1O95163 1332 aa21.02■□□□□ 0.95
CTSA-204ENST00000372484 CHD4Q14839 1912 aa21.01■□□□□ 0.95
CTSA-204ENST00000372484 GOLGA8BA8MQT2 603 aa21.01■□□□□ 0.95
CTSA-204ENST00000372484 GNAT2P19087 354 aa21.01■□□□□ 0.95
CTSA-204ENST00000372484 RESTQ13127 1097 aa21.01■□□□□ 0.95
CTSA-204ENST00000372484 NAA16Q6N069 864 aaPredicted RBP21.01■□□□□ 0.95
CTSA-204ENST00000372484 FAM196AQ6ZSG2 479 aa21.01■□□□□ 0.95
CTSA-204ENST00000372484 DHX16O60231 1041 aaKnown RBP21.01■□□□□ 0.95
CTSA-204ENST00000372484 PPFIA3O75145 1194 aa21.01■□□□□ 0.95
CTSA-204ENST00000372484 FOSBP53539 338 aa21.01■□□□□ 0.95
CTSA-204ENST00000372484 LCORLQ8N3X6 602 aa21.01■□□□□ 0.95
CTSA-204ENST00000372484 BCL11BQ9C0K0 894 aaPredicted RBP21.01■□□□□ 0.95
CTSA-204ENST00000372484 TFIP11Q9UBB9 837 aaKnown RBP21.01■□□□□ 0.95
CTSA-204ENST00000372484 PNPLA7Q6ZV29 1317 aa21■□□□□ 0.95
CTSA-204ENST00000372484 GSG1L2A8MUP6 293 aa21■□□□□ 0.95
CTSA-204ENST00000372484 MIGA1Q8NAN2 632 aa21■□□□□ 0.95
CTSA-204ENST00000372484 FAM84BQ96KN1 310 aaPredicted RBP21■□□□□ 0.95
CTSA-204ENST00000372484 SPATA32Q96LK8 384 aa21■□□□□ 0.95
CTSA-204ENST00000372484 NACAP1Q9BZK3 213 aa21■□□□□ 0.95
CTSA-204ENST00000372484 TSPY26PQ9H489 355 aa21■□□□□ 0.95
CTSA-204ENST00000372484 SLC4A4Q9Y6R1 1079 aa21■□□□□ 0.95
CTSA-204ENST00000372484 EP400Q96L91 3159 aa21■□□□□ 0.95
CTSA-204ENST00000372484 B4E1Z4 1266 aa20.99■□□□□ 0.95
CTSA-204ENST00000372484 CYP7A1P22680 504 aa20.99■□□□□ 0.95
CTSA-204ENST00000372484 CYB5R4Q7L1T6 521 aa20.99■□□□□ 0.95
CTSA-204ENST00000372484 RAI14Q9P0K7 980 aa20.99■□□□□ 0.95
CTSA-204ENST00000372484 ANGEL1Q9UNK9 670 aaKnown RBP20.99■□□□□ 0.95
CTSA-204ENST00000372484 HPS5Q9UPZ3 1129 aa20.99■□□□□ 0.95
CTSA-204ENST00000372484 CARMIL3Q8ND23 1372 aa20.99■□□□□ 0.95
CTSA-204ENST00000372484 PRKAB2O43741 272 aa20.99■□□□□ 0.95
CTSA-204ENST00000372484 LETM1O95202 739 aaPredicted RBP20.99■□□□□ 0.95
CTSA-204ENST00000372484 LRRC4BQ9NT99 713 aa20.99■□□□□ 0.95
CTSA-204ENST00000372484 NEDD4P46934 1319 aa20.99■□□□□ 0.95
CTSA-204ENST00000372484 COL1A1P02452 1464 aaPredicted RBP20.98■□□□□ 0.95
CTSA-204ENST00000372484 TDO2P48775 406 aa20.98■□□□□ 0.95
CTSA-204ENST00000372484 NKX2-3Q8TAU0 364 aa20.98■□□□□ 0.95
CTSA-204ENST00000372484 ANKRD2Q9GZV1 360 aa20.98■□□□□ 0.95
CTSA-204ENST00000372484 CTDSPL2Q05D32 466 aa20.98■□□□□ 0.95
CTSA-204ENST00000372484 CCDC173Q0VFZ6 552 aa20.98■□□□□ 0.95
CTSA-204ENST00000372484 RAB11FIP4Q86YS3 637 aa20.98■□□□□ 0.95
CTSA-204ENST00000372484 LEO1Q8WVC0 666 aaPredicted RBP20.98■□□□□ 0.95
CTSA-204ENST00000372484 CPLX1O14810 134 aa20.97■□□□□ 0.95
CTSA-204ENST00000372484 FDPSP14324 419 aaKnown RBP20.97■□□□□ 0.95
CTSA-204ENST00000372484 QTRT2Q9H974 415 aaKnown RBP20.97■□□□□ 0.95
CTSA-204ENST00000372484 MYH15Q9Y2K3 1946 aa20.97■□□□□ 0.95
CTSA-204ENST00000372484 GOLGA6L4A6NEF3 574 aa20.96■□□□□ 0.95
CTSA-204ENST00000372484 SH2B2O14492 632 aaPredicted RBP20.96■□□□□ 0.95
CTSA-204ENST00000372484 TM4SF1P30408 202 aa20.96■□□□□ 0.95
CTSA-204ENST00000372484 FBXO33Q7Z6M2 555 aa20.96■□□□□ 0.95
CTSA-204ENST00000372484 ADGRA1Q86SQ6 560 aa20.96■□□□□ 0.95
CTSA-204ENST00000372484 TMEM87BQ96K49 555 aa20.96■□□□□ 0.95
CTSA-204ENST00000372484 INCENPQ9NQS7 918 aa20.96■□□□□ 0.95
CTSA-204ENST00000372484 CFAP45Q9UL16 551 aa20.96■□□□□ 0.95
CTSA-204ENST00000372484 MYH13Q9UKX3 1938 aa20.96■□□□□ 0.95
CTSA-204ENST00000372484 KLRK1P26718 216 aa20.96■□□□□ 0.95
CTSA-204ENST00000372484 NFIXQ14938 502 aa20.96■□□□□ 0.95
CTSA-204ENST00000372484 CNNM2Q9H8M5 875 aa20.96■□□□□ 0.95
CTSA-204ENST00000372484 TNRC6CQ9HCJ0 1690 aaKnown RBP20.95■□□□□ 0.94
CTSA-204ENST00000372484 AKNAD1Q5T1N1 836 aa20.95■□□□□ 0.94
CTSA-204ENST00000372484 MFSD6Q6ZSS7 791 aa20.95■□□□□ 0.94
CTSA-204ENST00000372484 FAM43AQ8N2R8 423 aa20.95■□□□□ 0.94
CTSA-204ENST00000372484 RNF214Q8ND24 703 aa20.95■□□□□ 0.94
CTSA-204ENST00000372484 MAGEB6P1A0A0J9YX57 407 aa20.95■□□□□ 0.94
CTSA-204ENST00000372484 SEMA3EO15041 775 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms