RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 NUDCQ9Y266 331 aa10.36□□□□□ -0.75
YIPF3-201ENST00000372417 MYO9BQ13459 2157 aa10.35□□□□□ -0.75
YIPF3-201ENST00000372417 SPDYE5A6NIY4 337 aa10.35□□□□□ -0.75
YIPF3-201ENST00000372417 HSP90B1P14625 803 aaKnown RBP10.35□□□□□ -0.75
YIPF3-201ENST00000372417 FCGRTP55899 365 aa10.35□□□□□ -0.75
YIPF3-201ENST00000372417 EIF4G2P78344 907 aaKnown RBP eCLIP10.35□□□□□ -0.75
YIPF3-201ENST00000372417 GTF2IP78347 998 aa10.35□□□□□ -0.75
YIPF3-201ENST00000372417 SNAPC2Q13487 334 aa10.35□□□□□ -0.75
YIPF3-201ENST00000372417 CFAP100Q494V2 611 aa10.35□□□□□ -0.75
YIPF3-201ENST00000372417 MYLIPQ8WY64 445 aa10.35□□□□□ -0.75
YIPF3-201ENST00000372417 NBPF3Q9H094 633 aa10.35□□□□□ -0.75
YIPF3-201ENST00000372417 GABRQQ9UN88 632 aa10.35□□□□□ -0.75
YIPF3-201ENST00000372417 PCDHAC2Q9Y5I4 1007 aa10.35□□□□□ -0.75
YIPF3-201ENST00000372417 SPDYE2BA6NHP3 402 aa10.34□□□□□ -0.75
YIPF3-201ENST00000372417 SPDYE6P0CI01 402 aa10.34□□□□□ -0.75
YIPF3-201ENST00000372417 HSPA5P11021 654 aaKnown RBP10.34□□□□□ -0.75
YIPF3-201ENST00000372417 FOSL2P15408 326 aa10.34□□□□□ -0.75
YIPF3-201ENST00000372417 ELNP15502 786 aa10.34□□□□□ -0.75
YIPF3-201ENST00000372417 CCT4P50991 539 aaKnown RBP10.34□□□□□ -0.75
YIPF3-201ENST00000372417 TNFAIP1Q13829 316 aa10.34□□□□□ -0.75
YIPF3-201ENST00000372417 PLBD2Q8NHP8 589 aa10.34□□□□□ -0.75
YIPF3-201ENST00000372417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.34□□□□□ -0.75
YIPF3-201ENST00000372417 CCDC85AQ96PX6 553 aaPredicted RBP10.34□□□□□ -0.75
YIPF3-201ENST00000372417 C11orf49Q9H6J7 331 aa10.34□□□□□ -0.75
YIPF3-201ENST00000372417 MDM2Q00987 491 aaPredicted RBP10.33□□□□□ -0.76
YIPF3-201ENST00000372417 ERO1BQ86YB8 467 aa10.33□□□□□ -0.76
YIPF3-201ENST00000372417 PXYLP1Q8TE99 480 aa10.33□□□□□ -0.76
YIPF3-201ENST00000372417 SNX27Q96L92 541 aa10.33□□□□□ -0.76
YIPF3-201ENST00000372417 PRMT6Q96LA8 375 aaPredicted RBP10.33□□□□□ -0.76
YIPF3-201ENST00000372417 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.33□□□□□ -0.76
YIPF3-201ENST00000372417 SEMA6BQ9H3T3 888 aa10.33□□□□□ -0.76
YIPF3-201ENST00000372417 TSPYL4Q9UJ04 414 aa10.33□□□□□ -0.76
YIPF3-201ENST00000372417 AOX1Q06278 1338 aa10.33□□□□□ -0.76
YIPF3-201ENST00000372417 F8W031 263 aaPredicted RBP10.32□□□□□ -0.76
YIPF3-201ENST00000372417 IRF6O14896 467 aa10.32□□□□□ -0.76
YIPF3-201ENST00000372417 FLT3LGP49771 235 aa10.32□□□□□ -0.76
YIPF3-201ENST00000372417 PPIL2Q13356 520 aa10.32□□□□□ -0.76
YIPF3-201ENST00000372417 CNGB1Q14028 1251 aaPredicted RBP10.32□□□□□ -0.76
YIPF3-201ENST00000372417 ANKRD23Q86SG2 305 aa10.32□□□□□ -0.76
YIPF3-201ENST00000372417 TXNRD3Q86VQ6 643 aa10.32□□□□□ -0.76
YIPF3-201ENST00000372417 ZBTB38Q8NAP3 1195 aaPredicted RBP10.32□□□□□ -0.76
YIPF3-201ENST00000372417 ARIH1Q9Y4X5 557 aaPredicted RBP10.32□□□□□ -0.76
YIPF3-201ENST00000372417 SNCAIPQ9Y6H5 919 aa10.32□□□□□ -0.76
YIPF3-201ENST00000372417 PLXNB2O15031 1838 aa10.31□□□□□ -0.76
YIPF3-201ENST00000372417 MUC6Q6W4X9 2439 aa10.31□□□□□ -0.76
YIPF3-201ENST00000372417 PDHXO00330 501 aa10.31□□□□□ -0.76
YIPF3-201ENST00000372417 PDE8AO60658 829 aa10.31□□□□□ -0.76
YIPF3-201ENST00000372417 NEFMP07197 916 aa10.31□□□□□ -0.76
YIPF3-201ENST00000372417 RBM5P52756 815 aaKnown RBP eCLIP10.31□□□□□ -0.763e-7■■■■□ 25.8
YIPF3-201ENST00000372417 IRF5Q13568 498 aa10.31□□□□□ -0.76
YIPF3-201ENST00000372417 CDAN1Q8IWY9 1227 aa10.31□□□□□ -0.76
YIPF3-201ENST00000372417 CERS5Q8N5B7 392 aa10.31□□□□□ -0.76
YIPF3-201ENST00000372417 TEPSINQ96N21 525 aa10.31□□□□□ -0.76
YIPF3-201ENST00000372417 CDC5LQ99459 802 aaKnown RBP10.31□□□□□ -0.76
YIPF3-201ENST00000372417 MINPP1Q9UNW1 487 aa10.31□□□□□ -0.76
YIPF3-201ENST00000372417 HCN4Q9Y3Q4 1203 aa10.31□□□□□ -0.76
YIPF3-201ENST00000372417 PER1O15534 1290 aaPredicted RBP10.3□□□□□ -0.76
YIPF3-201ENST00000372417 BCRP11274 1271 aa10.3□□□□□ -0.76
YIPF3-201ENST00000372417 TRIM28Q13263 835 aaKnown RBP10.3□□□□□ -0.76
YIPF3-201ENST00000372417 PARK7Q99497 189 aaKnown RBP10.3□□□□□ -0.76
YIPF3-201ENST00000372417 BSDC1Q9NW68 430 aaPredicted RBP10.3□□□□□ -0.76
YIPF3-201ENST00000372417 TAOK2Q9UL54 1235 aa10.3□□□□□ -0.76
YIPF3-201ENST00000372417 LEMD3Q9Y2U8 911 aa10.3□□□□□ -0.76
YIPF3-201ENST00000372417 CACNA1AO00555 2505 aa10.29□□□□□ -0.76
YIPF3-201ENST00000372417 KLRK1P26718 216 aa10.29□□□□□ -0.76
YIPF3-201ENST00000372417 TNNI2P48788 182 aa10.29□□□□□ -0.76
YIPF3-201ENST00000372417 SPDYE2Q495Y8 402 aa10.29□□□□□ -0.76
YIPF3-201ENST00000372417 WRNIP1Q96S55 665 aa10.29□□□□□ -0.76
YIPF3-201ENST00000372417 TMEM39BQ9GZU3 492 aa10.29□□□□□ -0.76
YIPF3-201ENST00000372417 CHPF2Q9P2E5 772 aa10.29□□□□□ -0.76
YIPF3-201ENST00000372417 ZNF70Q9UC06 446 aaPredicted RBP10.29□□□□□ -0.76
YIPF3-201ENST00000372417 PHIPQ8WWQ0 1821 aa10.28□□□□□ -0.76
YIPF3-201ENST00000372417 TNPO2O14787 897 aaKnown RBP10.28□□□□□ -0.76
YIPF3-201ENST00000372417 PPATQ06203 517 aa10.28□□□□□ -0.76
YIPF3-201ENST00000372417 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.28□□□□□ -0.76
YIPF3-201ENST00000372417 ZKSCAN4Q969J2 545 aaPredicted RBP10.28□□□□□ -0.76
YIPF3-201ENST00000372417 LBHD1Q9BQE6 289 aaPredicted RBP10.28□□□□□ -0.76
YIPF3-201ENST00000372417 C1QTNF1Q9BXJ1 281 aa10.28□□□□□ -0.76
YIPF3-201ENST00000372417 TTYH1Q9H313 450 aaPredicted RBP10.28□□□□□ -0.76
YIPF3-201ENST00000372417 CD209Q9NNX6 404 aa10.28□□□□□ -0.76
YIPF3-201ENST00000372417 PFASO15067 1338 aa10.28□□□□□ -0.76
YIPF3-201ENST00000372417 TCP10L2B9ZVM9 353 aa10.27□□□□□ -0.77
YIPF3-201ENST00000372417 PCCAP05165 728 aaPredicted RBP10.27□□□□□ -0.77
YIPF3-201ENST00000372417 FKBP1AP62942 108 aaKnown RBP10.27□□□□□ -0.77
YIPF3-201ENST00000372417 USP38Q8NB14 1042 aa10.27□□□□□ -0.77
YIPF3-201ENST00000372417 ADAMTS19Q8TE59 1207 aa10.27□□□□□ -0.77
YIPF3-201ENST00000372417 UHRF1Q96T88 793 aaPredicted RBP10.27□□□□□ -0.77
YIPF3-201ENST00000372417 DOCK2Q92608 1830 aa10.27□□□□□ -0.77
YIPF3-201ENST00000372417 RLFQ13129 1914 aa10.27□□□□□ -0.77
YIPF3-201ENST00000372417 MYH13Q9UKX3 1938 aa10.27□□□□□ -0.77
YIPF3-201ENST00000372417 PLXNA1Q9UIW2 1896 aa10.26□□□□□ -0.77
YIPF3-201ENST00000372417 HMGCRP04035 888 aa10.26□□□□□ -0.77
YIPF3-201ENST00000372417 CYP2C8P10632 490 aa10.26□□□□□ -0.77
YIPF3-201ENST00000372417 KCNJ4P48050 445 aa10.26□□□□□ -0.77
YIPF3-201ENST00000372417 NFE2L2Q16236 605 aa10.26□□□□□ -0.77
YIPF3-201ENST00000372417 ANKRD2Q9GZV1 360 aa10.26□□□□□ -0.77
YIPF3-201ENST00000372417 TDRD3Q9H7E2 651 aaKnown RBP10.26□□□□□ -0.77
YIPF3-201ENST00000372417 HMX1Q9NP08 348 aaPredicted RBP10.26□□□□□ -0.77
YIPF3-201ENST00000372417 OGDHLQ9ULD0 1010 aa10.26□□□□□ -0.77
YIPF3-201ENST00000372417 CTSWP56202 376 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms