RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ARMT1Q9H993 441 aa31.3■■■□□ 2.6
ATPAF1-202ENST00000371937 RPS6KB1P23443 525 aa31.29■■■□□ 2.6
ATPAF1-202ENST00000371937 ALX1Q15699 326 aa31.29■■■□□ 2.6
ATPAF1-202ENST00000371937 EYA3Q99504 573 aa31.29■■■□□ 2.6
ATPAF1-202ENST00000371937 CACNA1SQ13698 1873 aa31.29■■■□□ 2.6
ATPAF1-202ENST00000371937 AK2P54819 239 aa31.28■■■□□ 2.6
ATPAF1-202ENST00000371937 MECOMQ03112 1051 aa31.28■■■□□ 2.6
ATPAF1-202ENST00000371937 TTLL5Q6EMB2 1281 aa31.28■■■□□ 2.6
ATPAF1-202ENST00000371937 OLFM4Q6UX06 510 aa31.28■■■□□ 2.6
ATPAF1-202ENST00000371937 COA1Q9GZY4 146 aa31.28■■■□□ 2.6
ATPAF1-202ENST00000371937 ZMYM6O95789 1325 aa31.28■■■□□ 2.6
ATPAF1-202ENST00000371937 MAGEB6P1A0A0J9YX57 407 aa31.28■■■□□ 2.6
ATPAF1-202ENST00000371937 ALDH8A1Q9H2A2 487 aaPredicted RBP31.28■■■□□ 2.6
ATPAF1-202ENST00000371937 LIMCH1Q9UPQ0 1083 aa31.28■■■□□ 2.6
ATPAF1-202ENST00000371937 ZNF213O14771 459 aa31.27■■■□□ 2.6
ATPAF1-202ENST00000371937 PRDX5P30044 214 aa31.27■■■□□ 2.6
ATPAF1-202ENST00000371937 CC2D2BQ6DHV5 1058 aa31.27■■■□□ 2.6
ATPAF1-202ENST00000371937 ADGRA1Q86SQ6 560 aa31.27■■■□□ 2.6
ATPAF1-202ENST00000371937 LCORLQ8N3X6 602 aa31.27■■■□□ 2.6
ATPAF1-202ENST00000371937 MIGA1Q8NAN2 632 aa31.27■■■□□ 2.6
ATPAF1-202ENST00000371937 DUOX1Q9NRD9 1551 aa31.26■■■□□ 2.6
ATPAF1-202ENST00000371937 LDHBP07195 334 aaKnown RBP31.26■■■□□ 2.6
ATPAF1-202ENST00000371937 ANKRD1Q15327 319 aa31.26■■■□□ 2.6
ATPAF1-202ENST00000371937 UPF1Q92900 1129 aaKnown RBP eCLIP31.26■■■□□ 2.6
ATPAF1-202ENST00000371937 NACAP1Q9BZK3 213 aa31.26■■■□□ 2.6
ATPAF1-202ENST00000371937 JAG2Q9Y219 1238 aa31.26■■■□□ 2.6
ATPAF1-202ENST00000371937 E7EWF7 191 aa31.26■■■□□ 2.59
ATPAF1-202ENST00000371937 NOL8Q76FK4 1167 aaKnown RBP31.26■■■□□ 2.59
ATPAF1-202ENST00000371937 DZIP1Q86YF9 867 aaKnown RBP31.26■■■□□ 2.59
ATPAF1-202ENST00000371937 MTFR1LQ9H019 292 aa31.26■■■□□ 2.59
ATPAF1-202ENST00000371937 RIMBP2O15034 1052 aa31.25■■■□□ 2.59
ATPAF1-202ENST00000371937 ZNF384Q8TF68 577 aa31.25■■■□□ 2.59
ATPAF1-202ENST00000371937 CHMP5Q9NZZ3 219 aa31.25■■■□□ 2.59
ATPAF1-202ENST00000371937 SLC4A4Q9Y6R1 1079 aa31.25■■■□□ 2.59
ATPAF1-202ENST00000371937 SLX4Q8IY92 1834 aa31.25■■■□□ 2.59
ATPAF1-202ENST00000371937 MAST2Q6P0Q8 1798 aa31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 ZBTB7AO95365 584 aa31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 POLD1P28340 1107 aa31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 STOX1Q6ZVD7 989 aa31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 IFNL3Q8IZI9 196 aa31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 TBC1D22AQ8WUA7 517 aa31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 CCDC88AQ3V6T2 1871 aa31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 DDIT3P35638 169 aa31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 CUL4AQ13619 759 aa31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 RIOK1Q9BRS2 568 aaKnown RBP31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 NAPBQ9H115 298 aa31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 CIZ1Q9ULV3 898 aaPredicted RBP31.24■■■□□ 2.59
ATPAF1-202ENST00000371937 GSG1L2A8MUP6 293 aa31.23■■■□□ 2.59
ATPAF1-202ENST00000371937 GSTO1P78417 241 aa31.23■■■□□ 2.59
ATPAF1-202ENST00000371937 C7orf43Q8WVR3 580 aa31.23■■■□□ 2.59
ATPAF1-202ENST00000371937 ZSCAN31Q96LW9 406 aaPredicted RBP31.23■■■□□ 2.59
ATPAF1-202ENST00000371937 FOXD4L1Q9NU39 408 aa31.23■■■□□ 2.59
ATPAF1-202ENST00000371937 A0A0G2JLW4 131 aa31.22■■■□□ 2.59
ATPAF1-202ENST00000371937 CWC22Q9HCG8 908 aaKnown RBP31.22■■■□□ 2.59
ATPAF1-202ENST00000371937 FAM205AQ6ZU69 1335 aa31.22■■■□□ 2.59
ATPAF1-202ENST00000371937 HAND2P61296 217 aa31.21■■■□□ 2.59
ATPAF1-202ENST00000371937 GRIPAP1Q4V328 841 aa31.21■■■□□ 2.59
ATPAF1-202ENST00000371937 DHX32Q7L7V1 743 aaKnown RBP31.21■■■□□ 2.59
ATPAF1-202ENST00000371937 TTLL6Q8N841 843 aa31.21■■■□□ 2.59
ATPAF1-202ENST00000371937 INTS4Q96HW7 963 aaKnown RBP31.21■■■□□ 2.59
ATPAF1-202ENST00000371937 RTFDC1Q9BY42 306 aaPredicted RBP31.21■■■□□ 2.59
ATPAF1-202ENST00000371937 DLEC1Q9Y238 1755 aa31.2■■■□□ 2.59
ATPAF1-202ENST00000371937 G3V3G9 751 aa31.2■■■□□ 2.59
ATPAF1-202ENST00000371937 DCAF8Q5TAQ9 597 aa31.2■■■□□ 2.59
ATPAF1-202ENST00000371937 EPB41L4AQ9HCS5 686 aaPredicted RBP31.2■■■□□ 2.59
ATPAF1-202ENST00000371937 SH2B1Q9NRF2 756 aaPredicted RBP31.2■■■□□ 2.59
ATPAF1-202ENST00000371937 PRKAB2O43741 272 aa31.19■■■□□ 2.58
ATPAF1-202ENST00000371937 R3HDM1Q15032 1099 aaKnown RBP31.19■■■□□ 2.58
ATPAF1-202ENST00000371937 LDHCP07864 332 aa31.19■■■□□ 2.58
ATPAF1-202ENST00000371937 TDO2P48775 406 aa31.19■■■□□ 2.58
ATPAF1-202ENST00000371937 ZNF219Q9P2Y4 722 aaPredicted RBP31.19■■■□□ 2.58
ATPAF1-202ENST00000371937 ATF5Q9Y2D1 282 aaPredicted RBP31.19■■■□□ 2.58
ATPAF1-202ENST00000371937 COL9A3Q14050 684 aaPredicted RBP31.18■■■□□ 2.58
ATPAF1-202ENST00000371937 MFSD14BQ5SR56 506 aa31.18■■■□□ 2.58
ATPAF1-202ENST00000371937 KIF13BQ9NQT8 1826 aa31.18■■■□□ 2.58
ATPAF1-202ENST00000371937 SUPT20HQ8NEM7 779 aa31.17■■■□□ 2.58
ATPAF1-202ENST00000371937 KIAA1551Q9HCM1 1747 aa31.17■■■□□ 2.58
ATPAF1-202ENST00000371937 DPEP1P16444 411 aa31.17■■■□□ 2.58
ATPAF1-202ENST00000371937 TGFB2P61812 414 aa31.17■■■□□ 2.58
ATPAF1-202ENST00000371937 DYNLL1P63167 89 aaKnown RBP31.17■■■□□ 2.58
ATPAF1-202ENST00000371937 NCOA7Q8NI08 942 aa31.17■■■□□ 2.58
ATPAF1-202ENST00000371937 TCEANC2Q96MN5 208 aa31.17■■■□□ 2.58
ATPAF1-202ENST00000371937 GTF2IP78347 998 aa31.16■■■□□ 2.58
ATPAF1-202ENST00000371937 TRDNQ13061 729 aa31.16■■■□□ 2.58
ATPAF1-202ENST00000371937 GIMAP6Q6P9H5 292 aa31.16■■■□□ 2.58
ATPAF1-202ENST00000371937 PODNQ7Z5L7 613 aa31.16■■■□□ 2.58
ATPAF1-202ENST00000371937 CRNKL1Q9BZJ0 848 aaKnown RBP31.16■■■□□ 2.58
ATPAF1-202ENST00000371937 AATFQ9NY61 560 aaKnown RBP eCLIP31.16■■■□□ 2.58
ATPAF1-202ENST00000371937 SUGT1Q9Y2Z0 365 aa31.16■■■□□ 2.58
ATPAF1-202ENST00000371937 EXOSC10Q01780 885 aaKnown RBP31.15■■■□□ 2.58
ATPAF1-202ENST00000371937 TOB2Q14106 344 aaPredicted RBP31.15■■■□□ 2.58
ATPAF1-202ENST00000371937 RALYLQ86SE5 291 aaKnown RBP31.15■■■□□ 2.58
ATPAF1-202ENST00000371937 SLF2Q8IX21 1173 aa31.15■■■□□ 2.58
ATPAF1-202ENST00000371937 LAMA4Q16363 1823 aa31.15■■■□□ 2.58
ATPAF1-202ENST00000371937 FGD1P98174 961 aa31.14■■■□□ 2.58
ATPAF1-202ENST00000371937 DOK7Q18PE1 504 aa31.14■■■□□ 2.58
ATPAF1-202ENST00000371937 CERS3Q8IU89 383 aa31.14■■■□□ 2.58
ATPAF1-202ENST00000371937 LARP6Q9BRS8 491 aaKnown RBP31.14■■■□□ 2.58
ATPAF1-202ENST00000371937 BAG3O95817 575 aa31.14■■■□□ 2.58
ATPAF1-202ENST00000371937 KCNA3P22001 575 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms