RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 DLGAP5Q15398 846 aa12.72□□□□□ -0.37
COL5A1-202ENST00000371820 FRAT1Q92837 279 aaPredicted RBP12.72□□□□□ -0.37
COL5A1-202ENST00000371820 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
COL5A1-202ENST00000371820 ECM29Q5VYK3 1845 aa12.72□□□□□ -0.37
COL5A1-202ENST00000371820 ARAP2Q8WZ64 1704 aa12.71□□□□□ -0.37
COL5A1-202ENST00000371820 SLC5A1P13866 664 aa12.71□□□□□ -0.37
COL5A1-202ENST00000371820 TRIM27P14373 513 aa12.71□□□□□ -0.37
COL5A1-202ENST00000371820 GYG1P46976 350 aa12.71□□□□□ -0.37
COL5A1-202ENST00000371820 RFX5P48382 616 aaPredicted RBP12.71□□□□□ -0.37
COL5A1-202ENST00000371820 RGS3P49796 1198 aa12.71□□□□□ -0.37
COL5A1-202ENST00000371820 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.37
COL5A1-202ENST00000371820 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.37
COL5A1-202ENST00000371820 VGLL2Q8N8G2 317 aa12.71□□□□□ -0.37
COL5A1-202ENST00000371820 MTMR14Q8NCE2 650 aa12.71□□□□□ -0.37
COL5A1-202ENST00000371820 TBC1D22AQ8WUA7 517 aa12.71□□□□□ -0.37
COL5A1-202ENST00000371820 FAM84BQ96KN1 310 aaPredicted RBP12.71□□□□□ -0.37
COL5A1-202ENST00000371820 MEIS3Q99687 375 aa12.71□□□□□ -0.37
COL5A1-202ENST00000371820 TTLL12Q14166 644 aaPredicted RBP12.7□□□□□ -0.38
COL5A1-202ENST00000371820 MVPQ14764 893 aaKnown RBP12.7□□□□□ -0.38
COL5A1-202ENST00000371820 MFSD14BQ5SR56 506 aa12.7□□□□□ -0.38
COL5A1-202ENST00000371820 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
COL5A1-202ENST00000371820 CTU1Q7Z7A3 348 aaKnown RBP12.7□□□□□ -0.38
COL5A1-202ENST00000371820 FTSJ3Q8IY81 847 aaKnown RBP12.7□□□□□ -0.38
COL5A1-202ENST00000371820 CERS5Q8N5B7 392 aa12.7□□□□□ -0.38
COL5A1-202ENST00000371820 KLHDC4Q8TBB5 520 aa12.7□□□□□ -0.38
COL5A1-202ENST00000371820 LPIN2Q92539 896 aa12.7□□□□□ -0.38
COL5A1-202ENST00000371820 CEP126Q9P2H0 1117 aa12.7□□□□□ -0.38
COL5A1-202ENST00000371820 COG6Q9Y2V7 657 aa12.7□□□□□ -0.38
COL5A1-202ENST00000371820 F8W031 263 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-202ENST00000371820 IL15P40933 162 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-202ENST00000371820 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-202ENST00000371820 COPRSQ9NQ92 184 aa12.69□□□□□ -0.38
COL5A1-202ENST00000371820 PPP2R3BQ9Y5P8 575 aa12.69□□□□□ -0.38
COL5A1-202ENST00000371820 SSC5DA1L4H1 1573 aa12.69□□□□□ -0.38
COL5A1-202ENST00000371820 MAST3O60307 1309 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 IGHDP01880 384 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 GNAI2P04899 355 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 FGFR2P21802 821 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 TM4SF4P48230 202 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 RBM5P52756 815 aaKnown RBP eCLIP12.68□□□□□ -0.38
COL5A1-202ENST00000371820 MTX1Q13505 466 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 GSE1Q14687 1217 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 CFAP100Q494V2 611 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 ARMC9Q7Z3E5 817 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 SIL1Q9H173 461 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 GNL3LQ9NVN8 582 aaKnown RBP12.68□□□□□ -0.38
COL5A1-202ENST00000371820 SERPINA10Q9UK55 444 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 TTF2Q9UNY4 1162 aaKnown RBP12.68□□□□□ -0.38
COL5A1-202ENST00000371820 JAG2Q9Y219 1238 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 SUGT1Q9Y2Z0 365 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 LAMB1P07942 1786 aa12.68□□□□□ -0.38
COL5A1-202ENST00000371820 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
COL5A1-202ENST00000371820 SRGAP3O43295 1099 aa12.67□□□□□ -0.38
COL5A1-202ENST00000371820 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
COL5A1-202ENST00000371820 SREBF2Q12772 1141 aa12.67□□□□□ -0.38
COL5A1-202ENST00000371820 CHAF1AQ13111 956 aaPredicted RBP12.67□□□□□ -0.38
COL5A1-202ENST00000371820 TNFAIP1Q13829 316 aa12.67□□□□□ -0.38
COL5A1-202ENST00000371820 NFKBIBQ15653 356 aa12.67□□□□□ -0.38
COL5A1-202ENST00000371820 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
COL5A1-202ENST00000371820 NOM1Q5C9Z4 860 aaKnown RBP12.67□□□□□ -0.38
COL5A1-202ENST00000371820 LDLRAD1Q5T700 205 aa12.67□□□□□ -0.38
COL5A1-202ENST00000371820 DEFB129Q9H1M3 183 aa12.67□□□□□ -0.38
COL5A1-202ENST00000371820 PCDHAC2Q9Y5I4 1007 aa12.67□□□□□ -0.38
COL5A1-202ENST00000371820 MYH13Q9UKX3 1938 aa12.66□□□□□ -0.38
COL5A1-202ENST00000371820 TBC1D8O95759 1140 aa12.66□□□□□ -0.38
COL5A1-202ENST00000371820 SOX10P56693 466 aa12.66□□□□□ -0.38
COL5A1-202ENST00000371820 HDLBPQ00341 1268 aaKnown RBP12.66□□□□□ -0.38
COL5A1-202ENST00000371820 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
COL5A1-202ENST00000371820 PRKG1Q13976 671 aa12.66□□□□□ -0.38
COL5A1-202ENST00000371820 MAP3K11Q16584 847 aa12.66□□□□□ -0.38
COL5A1-202ENST00000371820 ATG9AQ7Z3C6 839 aa12.66□□□□□ -0.38
COL5A1-202ENST00000371820 WDR66Q8TBY9 1149 aa12.66□□□□□ -0.38
COL5A1-202ENST00000371820 PANK1Q8TE04 598 aa12.66□□□□□ -0.38
COL5A1-202ENST00000371820 ZNF296Q8WUU4 475 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-202ENST00000371820 CFHR5Q9BXR6 569 aa12.66□□□□□ -0.38
COL5A1-202ENST00000371820 ANGEL1Q9UNK9 670 aaKnown RBP12.66□□□□□ -0.38
COL5A1-202ENST00000371820 AKAP2Q9Y2D5 859 aa12.66□□□□□ -0.38
COL5A1-202ENST00000371820 SEMA3EO15041 775 aa12.65□□□□□ -0.38
COL5A1-202ENST00000371820 TNNI2P48788 182 aa12.65□□□□□ -0.38
COL5A1-202ENST00000371820 BCAMP50895 628 aa12.65□□□□□ -0.38
COL5A1-202ENST00000371820 SPRYD7Q5W111 196 aa12.65□□□□□ -0.38
COL5A1-202ENST00000371820 TMEM57Q8N5G2 664 aa12.65□□□□□ -0.38
COL5A1-202ENST00000371820 VEZTQ9HBM0 779 aa12.65□□□□□ -0.38
COL5A1-202ENST00000371820 FZD1Q9UP38 647 aa12.65□□□□□ -0.38
COL5A1-202ENST00000371820 IQSEC3Q9UPP2 1182 aaPredicted RBP12.65□□□□□ -0.38
COL5A1-202ENST00000371820 AOX1Q06278 1338 aa12.64□□□□□ -0.39
COL5A1-202ENST00000371820 TNRC18O15417 2968 aaPredicted RBP12.64□□□□□ -0.39
COL5A1-202ENST00000371820 CLRN2A0PK11 232 aa12.64□□□□□ -0.39
COL5A1-202ENST00000371820 GPR25O00155 361 aa12.64□□□□□ -0.39
COL5A1-202ENST00000371820 ZBTB22O15209 634 aa12.64□□□□□ -0.39
COL5A1-202ENST00000371820 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
COL5A1-202ENST00000371820 SLC34A2O95436 690 aa12.64□□□□□ -0.39
COL5A1-202ENST00000371820 CRKP46108 304 aa12.64□□□□□ -0.39
COL5A1-202ENST00000371820 PKN2Q16513 984 aaKnown RBP12.64□□□□□ -0.39
COL5A1-202ENST00000371820 SUPT20HL1Q3ZLR7 823 aa12.64□□□□□ -0.39
COL5A1-202ENST00000371820 ZGPATQ8N5A5 531 aaKnown RBP12.64□□□□□ -0.39
COL5A1-202ENST00000371820 TEKT1Q969V4 418 aa12.64□□□□□ -0.39
COL5A1-202ENST00000371820 PRMT6Q96LA8 375 aaPredicted RBP12.64□□□□□ -0.39
COL5A1-202ENST00000371820 TMOD2Q9NZR1 351 aa12.64□□□□□ -0.39
COL5A1-202ENST00000371820 DENND2AQ9ULE3 1009 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms