RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 RASA3Q14644 834 aa20.16■□□□□ 0.82
VMA21-202ENST00000370361 DZIP1LQ8IYY4 767 aaKnown RBP20.16■□□□□ 0.82
VMA21-202ENST00000370361 JAG2Q9Y219 1238 aa20.16■□□□□ 0.82
VMA21-202ENST00000370361 CRKP46108 304 aa20.15■□□□□ 0.82
VMA21-202ENST00000370361 ANKRD13AQ8IZ07 590 aa20.15■□□□□ 0.82
VMA21-202ENST00000370361 TEKT1Q969V4 418 aa20.15■□□□□ 0.82
VMA21-202ENST00000370361 ZNF70Q9UC06 446 aaPredicted RBP20.15■□□□□ 0.82
VMA21-202ENST00000370361 SSC5DA1L4H1 1573 aa20.15■□□□□ 0.82
VMA21-202ENST00000370361 ZBTB22O15209 634 aa20.14■□□□□ 0.81
VMA21-202ENST00000370361 RFX5P48382 616 aaPredicted RBP20.14■□□□□ 0.81
VMA21-202ENST00000370361 PRKG1Q13976 671 aa20.14■□□□□ 0.81
VMA21-202ENST00000370361 WDR66Q8TBY9 1149 aa20.14■□□□□ 0.81
VMA21-202ENST00000370361 HOOK2Q96ED9 719 aa20.14■□□□□ 0.81
VMA21-202ENST00000370361 NOB1Q9ULX3 412 aaKnown RBP20.14■□□□□ 0.81
VMA21-202ENST00000370361 FKBP1CQ5VVH2 108 aa20.13■□□□□ 0.81
VMA21-202ENST00000370361 ZDHHC15Q96MV8 337 aa20.13■□□□□ 0.81
VMA21-202ENST00000370361 GNL3LQ9NVN8 582 aaKnown RBP20.13■□□□□ 0.81
VMA21-202ENST00000370361 TMOD2Q9NZR1 351 aa20.13■□□□□ 0.81
VMA21-202ENST00000370361 PCDHAC2Q9Y5I4 1007 aa20.13■□□□□ 0.81
VMA21-202ENST00000370361 IPO8O15397 1037 aaKnown RBP20.12■□□□□ 0.81
VMA21-202ENST00000370361 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
VMA21-202ENST00000370361 CHAF1AQ13111 956 aaPredicted RBP20.12■□□□□ 0.81
VMA21-202ENST00000370361 NBPF12Q5TAG4 269 aaPredicted RBP20.12■□□□□ 0.81
VMA21-202ENST00000370361 DIEXFQ68CQ4 756 aaKnown RBP20.12■□□□□ 0.81
VMA21-202ENST00000370361 OTUD7BQ6GQQ9 843 aa20.12■□□□□ 0.81
VMA21-202ENST00000370361 WNK4Q96J92 1243 aa20.12■□□□□ 0.81
VMA21-202ENST00000370361 TDRD3Q9H7E2 651 aaKnown RBP20.12■□□□□ 0.81
VMA21-202ENST00000370361 CEP126Q9P2H0 1117 aa20.12■□□□□ 0.81
VMA21-202ENST00000370361 SEMA3EO15041 775 aa20.11■□□□□ 0.81
VMA21-202ENST00000370361 GNAI3P08754 354 aa20.11■□□□□ 0.81
VMA21-202ENST00000370361 IL15P40933 162 aaPredicted RBP20.11■□□□□ 0.81
VMA21-202ENST00000370361 BCAMP50895 628 aa20.11■□□□□ 0.81
VMA21-202ENST00000370361 HHIPL2Q6UWX4 724 aa20.11■□□□□ 0.81
VMA21-202ENST00000370361 KLHDC4Q8TBB5 520 aa20.11■□□□□ 0.81
VMA21-202ENST00000370361 MYH13Q9UKX3 1938 aa20.11■□□□□ 0.81
VMA21-202ENST00000370361 GPR25O00155 361 aa20.1■□□□□ 0.81
VMA21-202ENST00000370361 MLLT1Q03111 559 aaPredicted RBP20.1■□□□□ 0.81
VMA21-202ENST00000370361 INTS3Q68E01 1043 aaKnown RBP20.1■□□□□ 0.81
VMA21-202ENST00000370361 FAM83AQ86UY5 434 aa20.1■□□□□ 0.81
VMA21-202ENST00000370361 ZNF296Q8WUU4 475 aaPredicted RBP20.1■□□□□ 0.81
VMA21-202ENST00000370361 RPAP1Q9BWH6 1393 aaPredicted RBP20.09■□□□□ 0.81
VMA21-202ENST00000370361 USP2O75604 605 aaPredicted RBP20.09■□□□□ 0.81
VMA21-202ENST00000370361 TBC1D8O95759 1140 aa20.09■□□□□ 0.81
VMA21-202ENST00000370361 MKRN3Q13064 507 aaKnown RBP20.09■□□□□ 0.81
VMA21-202ENST00000370361 ATG9AQ7Z3C6 839 aa20.09■□□□□ 0.81
VMA21-202ENST00000370361 IFNL1Q8IU54 200 aa20.09■□□□□ 0.81
VMA21-202ENST00000370361 COPRSQ9NQ92 184 aa20.09■□□□□ 0.81
VMA21-202ENST00000370361 IQSEC3Q9UPP2 1182 aaPredicted RBP20.09■□□□□ 0.81
VMA21-202ENST00000370361 FKTNO75072 461 aa20.08■□□□□ 0.81
VMA21-202ENST00000370361 ATP2B3Q16720 1220 aa20.08■□□□□ 0.81
VMA21-202ENST00000370361 MIER1Q8N108 512 aa20.08■□□□□ 0.81
VMA21-202ENST00000370361 ZGPATQ8N5A5 531 aaKnown RBP20.08■□□□□ 0.81
VMA21-202ENST00000370361 TEPSINQ96N21 525 aa20.08■□□□□ 0.81
VMA21-202ENST00000370361 AOX1Q06278 1338 aa20.07■□□□□ 0.8
VMA21-202ENST00000370361 TCP10L2B9ZVM9 353 aa20.07■□□□□ 0.8
VMA21-202ENST00000370361 CLMNQ96JQ2 1002 aa20.07■□□□□ 0.8
VMA21-202ENST00000370361 DENND2AQ9ULE3 1009 aa20.07■□□□□ 0.8
VMA21-202ENST00000370361 CSADQ9Y600 493 aa20.07■□□□□ 0.8
VMA21-202ENST00000370361 LRRFIP2Q9Y608 721 aaKnown RBP20.07■□□□□ 0.8
VMA21-202ENST00000370361 SALL1Q9NSC2 1324 aa20.06■□□□□ 0.8
VMA21-202ENST00000370361 TESPA1A2RU30 521 aaPredicted RBP20.06■□□□□ 0.8
VMA21-202ENST00000370361 MTX1Q13505 466 aa20.06■□□□□ 0.8
VMA21-202ENST00000370361 PDS5AQ29RF7 1337 aaKnown RBP20.05■□□□□ 0.8
VMA21-202ENST00000370361 OTOFQ9HC10 1997 aa20.05■□□□□ 0.8
VMA21-202ENST00000370361 MAP3K9P80192 1104 aa20.05■□□□□ 0.8
VMA21-202ENST00000370361 DCAF15Q66K64 600 aa20.05■□□□□ 0.8
VMA21-202ENST00000370361 APOBEC3HQ6NTF7 200 aaKnown RBP20.05■□□□□ 0.8
VMA21-202ENST00000370361 TMEM39BQ9GZU3 492 aa20.05■□□□□ 0.8
VMA21-202ENST00000370361 SIL1Q9H173 461 aa20.05■□□□□ 0.8
VMA21-202ENST00000370361 FZD1Q9UP38 647 aa20.05■□□□□ 0.8
VMA21-202ENST00000370361 AKAP2Q9Y2D5 859 aa20.05■□□□□ 0.8
VMA21-202ENST00000370361 GRIK5Q16478 980 aa20.04■□□□□ 0.8
VMA21-202ENST00000370361 FBXO46Q6PJ61 603 aaPredicted RBP20.04■□□□□ 0.8
VMA21-202ENST00000370361 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.04■□□□□ 0.8
VMA21-202ENST00000370361 MEIS3Q99687 375 aa20.04■□□□□ 0.8
VMA21-202ENST00000370361 GTF2A2P52657 109 aa20.03■□□□□ 0.8
VMA21-202ENST00000370361 ATF7IPQ6VMQ6 1270 aa20.03■□□□□ 0.8
VMA21-202ENST00000370361 OPTNQ96CV9 577 aa20.03■□□□□ 0.8
VMA21-202ENST00000370361 WDHD1O75717 1129 aaPredicted RBP20.02■□□□□ 0.8
VMA21-202ENST00000370361 LDHBP07195 334 aaKnown RBP20.02■□□□□ 0.8
VMA21-202ENST00000370361 VGLL4Q14135 290 aa20.02■□□□□ 0.8
VMA21-202ENST00000370361 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.02■□□□□ 0.8
VMA21-202ENST00000370361 SLF2Q8IX21 1173 aa20.02■□□□□ 0.8
VMA21-202ENST00000370361 ERO1AQ96HE7 468 aa20.02■□□□□ 0.8
VMA21-202ENST00000370361 ZCCHC17Q9NP64 241 aaKnown RBP20.02■□□□□ 0.8
VMA21-202ENST00000370361 HPS5Q9UPZ3 1129 aa20.02■□□□□ 0.8
VMA21-202ENST00000370361 IGF2BP3O00425 579 aaKnown RBP eCLIP20.01■□□□□ 0.79
VMA21-202ENST00000370361 SRGAP3O43295 1099 aa20.01■□□□□ 0.79
VMA21-202ENST00000370361 ELP3Q9H9T3 547 aa20.01■□□□□ 0.79
VMA21-202ENST00000370361 GNAI2P04899 355 aa20■□□□□ 0.79
VMA21-202ENST00000370361 TRIM27P14373 513 aa20■□□□□ 0.79
VMA21-202ENST00000370361 GJA5P36382 358 aa20■□□□□ 0.79
VMA21-202ENST00000370361 MVPQ14764 893 aaKnown RBP20■□□□□ 0.79
VMA21-202ENST00000370361 ARHGEF6Q15052 776 aa20■□□□□ 0.79
VMA21-202ENST00000370361 ERO1BQ86YB8 467 aa20■□□□□ 0.79
VMA21-202ENST00000370361 FAM151AQ8WW52 585 aa20■□□□□ 0.79
VMA21-202ENST00000370361 DAGLAQ9Y4D2 1042 aa20■□□□□ 0.79
VMA21-202ENST00000370361 SPDYE5A6NIY4 337 aa19.99■□□□□ 0.79
VMA21-202ENST00000370361 SPTY2D1Q68D10 685 aaPredicted RBP19.99■□□□□ 0.79
VMA21-202ENST00000370361 MS4A4AQ96JQ5 239 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms