RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 LETM2Q2VYF4 491 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 FAM89AQ96GI7 184 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 FRMD4BQ9Y2L6 1034 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 CCDC171Q6TFL3 1326 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 DACT1Q9NYF0 836 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 GGA1Q9UJY5 639 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 F13A1P00488 732 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 ITGA6P23229 1130 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 HOXC9P31274 260 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 ODF2LQ9ULJ1 636 aa20.23■□□□□ 0.83
SNX27-203ENST00000368843 CCDC114Q96M63 670 aa20.22■□□□□ 0.83
SNX27-203ENST00000368843 CCDC169A6NNP5 214 aa20.22■□□□□ 0.83
SNX27-203ENST00000368843 ATP2A1O14983 1001 aa20.22■□□□□ 0.83
SNX27-203ENST00000368843 MYCLP12524 364 aaPredicted RBP20.22■□□□□ 0.83
SNX27-203ENST00000368843 SYT1P21579 422 aa20.22■□□□□ 0.83
SNX27-203ENST00000368843 KRT24Q2M2I5 525 aa20.22■□□□□ 0.83
SNX27-203ENST00000368843 RRP9O43818 475 aaKnown RBP20.22■□□□□ 0.83
SNX27-203ENST00000368843 HIBADHP31937 336 aaKnown RBP20.22■□□□□ 0.83
SNX27-203ENST00000368843 ZNF174Q15697 407 aa20.22■□□□□ 0.83
SNX27-203ENST00000368843 FNBP1Q96RU3 617 aa20.22■□□□□ 0.83
SNX27-203ENST00000368843 PTPDC1A2A3K4 754 aa20.22■□□□□ 0.83
SNX27-203ENST00000368843 POLKQ9UBT6 870 aa20.22■□□□□ 0.83
SNX27-203ENST00000368843 ZNF518AQ6AHZ1 1483 aa20.21■□□□□ 0.83
SNX27-203ENST00000368843 H0YIN7 160 aa20.21■□□□□ 0.83
SNX27-203ENST00000368843 CCNT1O60563 726 aaKnown RBP20.21■□□□□ 0.83
SNX27-203ENST00000368843 BIRC3Q13489 604 aa20.21■□□□□ 0.83
SNX27-203ENST00000368843 TXNDC16Q9P2K2 825 aa20.21■□□□□ 0.83
SNX27-203ENST00000368843 CTAGE15A4D2H0 777 aa20.21■□□□□ 0.83
SNX27-203ENST00000368843 CTAGE8P0CG41 777 aa20.21■□□□□ 0.83
SNX27-203ENST00000368843 PSMC4P43686 418 aa20.21■□□□□ 0.83
SNX27-203ENST00000368843 CTAGE6Q86UF2 777 aa20.21■□□□□ 0.83
SNX27-203ENST00000368843 CTAGE4Q8IX94 777 aa20.21■□□□□ 0.83
SNX27-203ENST00000368843 SH3BP5O60239 455 aa20.21■□□□□ 0.83
SNX27-203ENST00000368843 RNF34Q969K3 372 aa20.21■□□□□ 0.83
SNX27-203ENST00000368843 YTHDC2Q9H6S0 1430 aaKnown RBP20.21■□□□□ 0.83
SNX27-203ENST00000368843 NOP56O00567 594 aaKnown RBP20.21■□□□□ 0.83
SNX27-203ENST00000368843 FAM98CQ17RN3 349 aaKnown RBP20.21■□□□□ 0.83
SNX27-203ENST00000368843 CTAGE9A4FU28 777 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 VWA3AA6NCI4 1184 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 KRT9P35527 623 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 ARMT1Q9H993 441 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 GINS2Q9Y248 185 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 ATP6V0A2Q9Y487 856 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 DDX39AO00148 427 aaKnown RBP20.2■□□□□ 0.82
SNX27-203ENST00000368843 CCDC65Q8IXS2 484 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 CCDC77Q9BR77 488 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 AK2P54819 239 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 WDR44Q5JSH3 913 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 FBF1Q8TES7 1133 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 SELENOSQ9BQE4 189 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 TRPM2O94759 1503 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 CCT6AP40227 531 aaKnown RBP20.2■□□□□ 0.82
SNX27-203ENST00000368843 EYA1Q99502 592 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 DNAI1Q9UI46 699 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 SNX16P57768 344 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 KIF5AQ12840 1032 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 RUFY3Q7L099 469 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 PAXBP1Q9Y5B6 917 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 IVNS1ABPQ9Y6Y0 642 aa20.2■□□□□ 0.82
SNX27-203ENST00000368843 SV2BQ7L1I2 683 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 CCDC24Q8N4L8 307 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 FAM169AQ9Y6X4 670 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 SKILP12757 684 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 DNAJC21Q5F1R6 531 aaKnown RBP20.19■□□□□ 0.82
SNX27-203ENST00000368843 LARGE2Q8N3Y3 721 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 CCDC42Q96M95 316 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 EIF2AK4Q9P2K8 1649 aaKnown RBP20.19■□□□□ 0.82
SNX27-203ENST00000368843 KRT83P78385 493 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 CEP85Q6P2H3 762 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 DPP8Q6V1X1 898 aaPredicted RBP20.19■□□□□ 0.82
SNX27-203ENST00000368843 UIMC1Q96RL1 719 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 BEGAINQ9BUH8 593 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 NSRP1Q9H0G5 558 aaKnown RBP20.19■□□□□ 0.82
SNX27-203ENST00000368843 PCDHB15Q9Y5E8 787 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 GAS8O95995 478 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 EPB41P11171 864 aaKnown RBP20.19■□□□□ 0.82
SNX27-203ENST00000368843 PPP1R7Q15435 360 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 GPATCH8Q9UKJ3 1502 aaKnown RBP20.19■□□□□ 0.82
SNX27-203ENST00000368843 AGTPBP1Q9UPW5 1226 aa20.19■□□□□ 0.82
SNX27-203ENST00000368843 PUM3Q15397 648 aaKnown RBP20.18■□□□□ 0.82
SNX27-203ENST00000368843 MAEAQ7L5Y9 396 aa20.18■□□□□ 0.82
SNX27-203ENST00000368843 NAP1L4Q99733 375 aaKnown RBP20.18■□□□□ 0.82
SNX27-203ENST00000368843 TRIM6Q9C030 488 aaPredicted RBP20.18■□□□□ 0.82
SNX27-203ENST00000368843 CTNND2Q9UQB3 1225 aa20.18■□□□□ 0.82
SNX27-203ENST00000368843 CCDC160A6NGH7 325 aa20.18■□□□□ 0.82
SNX27-203ENST00000368843 EAPPQ56P03 285 aaPredicted RBP20.18■□□□□ 0.82
SNX27-203ENST00000368843 BRDTQ58F21 947 aaPredicted RBP20.18■□□□□ 0.82
SNX27-203ENST00000368843 CFAP58Q5T655 872 aa20.18■□□□□ 0.82
SNX27-203ENST00000368843 CCDC25Q86WR0 208 aa20.18■□□□□ 0.82
SNX27-203ENST00000368843 TSPYL6Q8N831 410 aa20.18■□□□□ 0.82
SNX27-203ENST00000368843 RASA3Q14644 834 aa20.18■□□□□ 0.82
SNX27-203ENST00000368843 AATFQ9NY61 560 aaKnown RBP eCLIP20.18■□□□□ 0.82
SNX27-203ENST00000368843 B4E1Z4 1266 aa20.18■□□□□ 0.82
SNX27-203ENST00000368843 TCP10Q12799 353 aa20.17■□□□□ 0.82
SNX27-203ENST00000368843 DHX32Q7L7V1 743 aaKnown RBP20.17■□□□□ 0.82
SNX27-203ENST00000368843 KLHL40Q2TBA0 621 aa20.17■□□□□ 0.82
SNX27-203ENST00000368843 CCDC129Q6ZRS4 1044 aa20.17■□□□□ 0.82
SNX27-203ENST00000368843 GPIHBP1Q8IV16 184 aa20.17■□□□□ 0.82
SNX27-203ENST00000368843 IP6K1Q92551 441 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms