RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 PTPRTO14522 1441 aa12.27□□□□□ -0.44
PTPRK-205ENST00000368213 NEURL1BA8MQ27 555 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 LPXNO60711 386 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 MMP10P09238 476 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 LRSAM1Q6UWE0 723 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 TMC4Q7Z404 712 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 ZNF354CQ86Y25 554 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 GJD4Q96KN9 370 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-205ENST00000368213 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 PRDM1O75626 825 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 IGHDP01880 384 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 CTNNA2P26232 953 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 IL17REQ8NFR9 667 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 PIM2Q9P1W9 311 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 MBD5Q9P267 1494 aa12.27□□□□□ -0.45
PTPRK-205ENST00000368213 ERBB4Q15303 1308 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 M0QZ92 97 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 CCDC102BQ68D86 513 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 ARMC9Q7Z3E5 817 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 TTLL6Q8N841 843 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 RMND1Q9NWS8 449 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 KIF4AO95239 1232 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 RXRAP19793 462 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 XDHP47989 1333 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 CTAGE5O15320 804 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 ARHGAP29Q52LW3 1261 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 SKAP1Q86WV1 359 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 APPBP2Q92624 585 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 FAM135BQ49AJ0 1406 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 GYG1P46976 350 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 EN1Q05925 392 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-205ENST00000368213 AZI2Q9H6S1 392 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 RTL1A6NKG5 1358 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 PALLDQ8WX93 1383 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 SSFA2P28290 1259 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 KIFC2Q96AC6 838 aa12.26□□□□□ -0.45
PTPRK-205ENST00000368213 PSDA5PKW4 1024 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-205ENST00000368213 TRIM75PA6NK02 468 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 ERFEQ4G0M1 354 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 FAM47CQ5HY64 1035 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 DCTPP1Q9H773 170 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 ERBB3P21860 1342 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 A2ML1A8K2U0 1454 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 B4E1Z4 1266 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 PCCAP05165 728 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-205ENST00000368213 SPOUT1Q5T280 376 aaKnown RBP12.25□□□□□ -0.45
PTPRK-205ENST00000368213 DPH6Q7L8W6 267 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 FNBP4Q8N3X1 1017 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-205ENST00000368213 ZSCAN16Q9H4T2 348 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-205ENST00000368213 ASIC1P78348 528 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 USH1GQ495M9 461 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 CTNNBL1Q8WYA6 563 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-205ENST00000368213 TRIM47Q96LD4 638 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 NUP88Q99567 741 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-205ENST00000368213 RAD50Q92878 1312 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 MAP3K4Q9Y6R4 1608 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 BIN1O00499 593 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 GPAA1O43292 621 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 CHMP2AO43633 222 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 SUPT20HL1Q3ZLR7 823 aa12.25□□□□□ -0.45
PTPRK-205ENST00000368213 MCM7P33993 719 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 AFMP43652 599 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 APOBRQ0VD83 1088 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 ZNF804BA4D1E1 1349 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 BBOX1O75936 387 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 TNNT1P13805 278 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 USP6P35125 1406 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 CHRNDQ07001 517 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 RTKN2Q8IZC4 609 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 DBNDD1Q9H9R9 158 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 ZAP70P43403 619 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 TEX35Q5T0J7 233 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 IQCEQ6IPM2 695 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 DHX37Q8IY37 1157 aaKnown RBP12.24□□□□□ -0.45
PTPRK-205ENST00000368213 CLRN2A0PK11 232 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 SRP68Q9UHB9 627 aaKnown RBP12.24□□□□□ -0.45
PTPRK-205ENST00000368213 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 CREB3L3Q68CJ9 461 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 TNNQ9UQP3 1299 aa12.24□□□□□ -0.45
PTPRK-205ENST00000368213 RAD17O75943 681 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 DHX32Q7L7V1 743 aaKnown RBP12.23□□□□□ -0.45
PTPRK-205ENST00000368213 FERMT1Q9BQL6 677 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 GLT8D2Q9H1C3 349 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 SPON1Q9HCB6 807 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 GOLGA6L10A6NI86 522 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 NPR1P16066 1061 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 ZRSR2Q15696 482 aaKnown RBP12.23□□□□□ -0.45
PTPRK-205ENST00000368213 AKNAD1Q5T1N1 836 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 CCDC129Q6ZRS4 1044 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 EP400NLQ6ZTU2 488 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 CHURC1Q8WUH1 139 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 ZNF532Q9HCE3 1301 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 GBP2P32456 591 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-205ENST00000368213 CC2D2BQ6DHV5 1058 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 DKC1O60832 514 aaKnown RBP eCLIP12.23□□□□□ -0.459e-7■■■■■ 28.8
PTPRK-205ENST00000368213 RRAGBQ5VZM2 374 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 TRIM6Q9C030 488 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-205ENST00000368213 TAOK3Q9H2K8 898 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 CLIP2Q9UDT6 1046 aa12.23□□□□□ -0.45
PTPRK-205ENST00000368213 LETM2Q2VYF4 491 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms