RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 USTQ9Y2C2 406 aa4.93□□□□□ -1.62
RNU4-42P-201ENST00000364738 LEMD3Q9Y2U8 911 aa4.93□□□□□ -1.62
RNU4-42P-201ENST00000364738 ICMTO60725 284 aa4.92□□□□□ -1.62
RNU4-42P-201ENST00000364738 ADH5P11766 374 aa4.92□□□□□ -1.62
RNU4-42P-201ENST00000364738 MAOBP27338 520 aa4.92□□□□□ -1.62
RNU4-42P-201ENST00000364738 SERPINB4P48594 390 aa4.92□□□□□ -1.62
RNU4-42P-201ENST00000364738 SOX4Q06945 474 aaPredicted RBP4.92□□□□□ -1.62
RNU4-42P-201ENST00000364738 CPSF6Q16630 551 aaKnown RBP eCLIP4.92□□□□□ -1.62
RNU4-42P-201ENST00000364738 CDPF1Q6NVV7 123 aa4.92□□□□□ -1.62
RNU4-42P-201ENST00000364738 GALNT12Q8IXK2 581 aa4.92□□□□□ -1.62
RNU4-42P-201ENST00000364738 C2CD4AQ8NCU7 369 aaPredicted RBP4.92□□□□□ -1.62
RNU4-42P-201ENST00000364738 ANGEL1Q9UNK9 670 aaKnown RBP4.92□□□□□ -1.62
RNU4-42P-201ENST00000364738 NDUFB5O43674 189 aa4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 CYP11A1P05108 521 aa4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 FOSL1P15407 271 aa4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 TAL1P17542 331 aaPredicted RBP4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 GRIA4P48058 902 aa4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 ZNF423Q2M1K9 1284 aa4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 SPRED3Q2MJR0 410 aa4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 HP1BP3Q5SSJ5 553 aaPredicted RBP4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 USPL1Q5W0Q7 1092 aa4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 TBC1D32Q96NH3 1257 aa4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 TCF12Q99081 682 aa4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 METTL22Q9BUU2 404 aaPredicted RBP4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 GOLGA2P5Q9HBQ8 144 aa4.91□□□□□ -1.62
RNU4-42P-201ENST00000364738 RAB6AP20340 208 aa4.9□□□□□ -1.63
RNU4-42P-201ENST00000364738 POU4F3Q15319 338 aa4.9□□□□□ -1.63
RNU4-42P-201ENST00000364738 MSMPQ1L6U9 139 aa4.9□□□□□ -1.63
RNU4-42P-201ENST00000364738 AKAP4Q5JQC9 854 aa4.9□□□□□ -1.63
RNU4-42P-201ENST00000364738 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.63
RNU4-42P-201ENST00000364738 DDX54Q8TDD1 881 aaKnown RBP4.9□□□□□ -1.63
RNU4-42P-201ENST00000364738 PRKAG2Q9UGJ0 569 aa4.9□□□□□ -1.63
RNU4-42P-201ENST00000364738 AP4E1Q9UPM8 1137 aa4.9□□□□□ -1.63
RNU4-42P-201ENST00000364738 ACTL7BQ9Y614 415 aa4.9□□□□□ -1.63
RNU4-42P-201ENST00000364738 B3GALT4O96024 378 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 NEFLP07196 543 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 CTSBP07858 339 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 TXKP42681 527 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 PDE3BQ13370 1112 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 ORC1Q13415 861 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 KIAA0319Q5VV43 1072 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 DYMQ7RTS9 669 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 ZAR1Q86SH2 424 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 C14orf37Q86TY3 774 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 ABI1Q8IZP0 508 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 SHISA5Q8N114 240 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 EZH1Q92800 747 aaPredicted RBP4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 CORO1BQ9BR76 489 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 EHD4Q9H223 541 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 ZNF576Q9H609 170 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 ZFYVE1Q9HBF4 777 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 NPHS2Q9NP85 383 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 RAD18Q9NS91 495 aa4.89□□□□□ -1.63
RNU4-42P-201ENST00000364738 FAM170BA6NMN3 283 aa4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 CYP26A1O43174 497 aa4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 CPNE3O75131 537 aaKnown RBP4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 ECEL1O95672 775 aa4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 NFICP08651 508 aa4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 ADMP35318 185 aa4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 ARHGAP4P98171 946 aa4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 MAP7Q14244 749 aa4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 VSIG10LQ86VR7 867 aa4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 FMNL2Q96PY5 1086 aa4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 TRIM56Q9BRZ2 755 aaKnown RBP4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 RNF114Q9Y508 228 aa4.88□□□□□ -1.63
RNU4-42P-201ENST00000364738 ITPKAP23677 461 aa4.87□□□□□ -1.63
RNU4-42P-201ENST00000364738 PDE3AQ14432 1141 aa4.87□□□□□ -1.63
RNU4-42P-201ENST00000364738 ECM1Q16610 540 aa4.87□□□□□ -1.63
RNU4-42P-201ENST00000364738 TMC1Q8TDI8 760 aa4.87□□□□□ -1.63
RNU4-42P-201ENST00000364738 FAM129BQ96TA1 746 aa4.87□□□□□ -1.63
RNU4-42P-201ENST00000364738 SEMA6CQ9H3T2 930 aa4.87□□□□□ -1.63
RNU4-42P-201ENST00000364738 FAM105AQ9NUU6 356 aa4.87□□□□□ -1.63
RNU4-42P-201ENST00000364738 CCDC39Q9UFE4 941 aa4.87□□□□□ -1.63
RNU4-42P-201ENST00000364738 ADGRE2Q9UHX3 823 aa4.87□□□□□ -1.63
RNU4-42P-201ENST00000364738 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.86□□□□□ -1.63
RNU4-42P-201ENST00000364738 PRNPP04156 253 aa4.86□□□□□ -1.63
RNU4-42P-201ENST00000364738 ASPAP45381 313 aa4.86□□□□□ -1.63
RNU4-42P-201ENST00000364738 DUSP27Q5VZP5 1158 aa4.86□□□□□ -1.63
RNU4-42P-201ENST00000364738 FBXL18Q96ME1 805 aa4.86□□□□□ -1.63
RNU4-42P-201ENST00000364738 ACSS3Q9H6R3 686 aa4.86□□□□□ -1.63
RNU4-42P-201ENST00000364738 LRRC4CQ9HCJ2 640 aa4.86□□□□□ -1.63
RNU4-42P-201ENST00000364738 ABCB6Q9NP58 842 aa4.86□□□□□ -1.63
RNU4-42P-201ENST00000364738 BSDC1Q9NW68 430 aaPredicted RBP4.86□□□□□ -1.63
RNU4-42P-201ENST00000364738 DAGLAQ9Y4D2 1042 aa4.86□□□□□ -1.63
RNU4-42P-201ENST00000364738 BTBD11A6QL63 1104 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 EIF1AYO14602 144 aaKnown RBP4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 GPR182O15218 404 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 AOC2O75106 756 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 GADD45BO75293 160 aaPredicted RBP4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 CYP27A1Q02318 531 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 AP3B2Q13367 1082 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 PRPF40BQ6NWY9 871 aaKnown RBP4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 ZNF765Q7L2R6 523 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 TP53INP2Q8IXH6 220 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 FLCNQ8NFG4 579 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 GATA6Q92908 595 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 CCDC74AQ96AQ1 378 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 CITED4Q96RK1 184 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 WDR18Q9BV38 432 aa4.85□□□□□ -1.63
RNU4-42P-201ENST00000364738 PTPN12Q05209 780 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms