RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 BCL2L12Q9HB09 334 aa26.53■■□□□ 1.84
LDB1-201ENST00000361198 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.53■■□□□ 1.84
LDB1-201ENST00000361198 TAF1P21675 1872 aa26.52■■□□□ 1.84
LDB1-201ENST00000361198 TBC1D9BQ66K14 1250 aa26.52■■□□□ 1.84
LDB1-201ENST00000361198 NAA16Q6N069 864 aaPredicted RBP26.52■■□□□ 1.84
LDB1-201ENST00000361198 NKX2-3Q8TAU0 364 aa26.52■■□□□ 1.84
LDB1-201ENST00000361198 R3HCC1Q9Y3T6 440 aaKnown RBP26.52■■□□□ 1.84
LDB1-201ENST00000361198 SF3B3Q15393 1217 aaKnown RBP26.51■■□□□ 1.84
LDB1-201ENST00000361198 FAM182BQ5T319 152 aa26.51■■□□□ 1.84
LDB1-201ENST00000361198 USP21Q9UK80 565 aa26.51■■□□□ 1.84
LDB1-201ENST00000361198 KIF3AQ9Y496 699 aa26.51■■□□□ 1.84
LDB1-201ENST00000361198 KLF18A0A0U1RQI7 1052 aa26.51■■□□□ 1.83
LDB1-201ENST00000361198 FDPSP14324 419 aaKnown RBP26.5■■□□□ 1.83
LDB1-201ENST00000361198 TRDNQ13061 729 aa26.5■■□□□ 1.83
LDB1-201ENST00000361198 GIMAP6Q6P9H5 292 aa26.5■■□□□ 1.83
LDB1-201ENST00000361198 ANKRD18AQ8IVF6 992 aa26.5■■□□□ 1.83
LDB1-201ENST00000361198 HPS5Q9UPZ3 1129 aa26.5■■□□□ 1.83
LDB1-201ENST00000361198 KDM4AO75164 1064 aa26.5■■□□□ 1.83
LDB1-201ENST00000361198 ADCY5O95622 1261 aa26.5■■□□□ 1.83
LDB1-201ENST00000361198 CHMP4CQ96CF2 233 aa26.5■■□□□ 1.83
LDB1-201ENST00000361198 WDR19Q8NEZ3 1342 aa26.5■■□□□ 1.83
LDB1-201ENST00000361198 CARMIL3Q8ND23 1372 aa26.49■■□□□ 1.83
LDB1-201ENST00000361198 MBD4O95243 580 aa26.49■■□□□ 1.83
LDB1-201ENST00000361198 PRKCSHP14314 528 aaPredicted RBP26.49■■□□□ 1.83
LDB1-201ENST00000361198 LIG1P18858 919 aa26.49■■□□□ 1.83
LDB1-201ENST00000361198 BTAF1O14981 1849 aa26.49■■□□□ 1.83
LDB1-201ENST00000361198 WTIPA6NIX2 430 aaPredicted RBP26.49■■□□□ 1.83
LDB1-201ENST00000361198 PATL2C9JE40 543 aaKnown RBP26.49■■□□□ 1.83
LDB1-201ENST00000361198 EPB41L4AQ9HCS5 686 aaPredicted RBP26.49■■□□□ 1.83
LDB1-201ENST00000361198 CASZ1Q86V15 1759 aa26.48■■□□□ 1.83
LDB1-201ENST00000361198 GOLGA8BA8MQT2 603 aa26.48■■□□□ 1.83
LDB1-201ENST00000361198 GTF2E1P29083 439 aaPredicted RBP26.48■■□□□ 1.83
LDB1-201ENST00000361198 KIAA2012Q0VF49 1180 aa26.48■■□□□ 1.83
LDB1-201ENST00000361198 CYB5R4Q7L1T6 521 aa26.48■■□□□ 1.83
LDB1-201ENST00000361198 RAB11FIP4Q86YS3 637 aa26.48■■□□□ 1.83
LDB1-201ENST00000361198 ARMT1Q9H993 441 aa26.48■■□□□ 1.83
LDB1-201ENST00000361198 SRP68Q9UHB9 627 aaKnown RBP26.48■■□□□ 1.83
LDB1-201ENST00000361198 IQSEC3Q9UPP2 1182 aaPredicted RBP26.48■■□□□ 1.83
LDB1-201ENST00000361198 RPS6KA4O75676 772 aa26.48■■□□□ 1.83
LDB1-201ENST00000361198 ALX1Q15699 326 aa26.48■■□□□ 1.83
LDB1-201ENST00000361198 RC3H1Q5TC82 1133 aaKnown RBP26.48■■□□□ 1.83
LDB1-201ENST00000361198 IFNL3Q8IZI9 196 aa26.48■■□□□ 1.83
LDB1-201ENST00000361198 NARFQ9UHQ1 456 aa26.48■■□□□ 1.83
LDB1-201ENST00000361198 SCN7AQ01118 1682 aa26.48■■□□□ 1.83
LDB1-201ENST00000361198 GOLGA6L4A6NEF3 574 aa26.47■■□□□ 1.83
LDB1-201ENST00000361198 ADD1P35611 737 aaKnown RBP26.47■■□□□ 1.83
LDB1-201ENST00000361198 BSDC1Q9NW68 430 aaPredicted RBP26.47■■□□□ 1.83
LDB1-201ENST00000361198 GUCY1B3Q02153 619 aa26.46■■□□□ 1.83
LDB1-201ENST00000361198 PGBD1Q96JS3 809 aa26.46■■□□□ 1.83
LDB1-201ENST00000361198 RGL2O15211 777 aa26.46■■□□□ 1.83
LDB1-201ENST00000361198 SLC10A5Q5PT55 438 aa26.46■■□□□ 1.83
LDB1-201ENST00000361198 B4E1Z4 1266 aa26.45■■□□□ 1.83
LDB1-201ENST00000361198 GNPATO15228 680 aa26.45■■□□□ 1.83
LDB1-201ENST00000361198 GYG1P46976 350 aa26.45■■□□□ 1.83
LDB1-201ENST00000361198 CELF1Q92879 486 aaKnown RBP26.45■■□□□ 1.83
LDB1-201ENST00000361198 CFAP45Q9UL16 551 aa26.45■■□□□ 1.83
LDB1-201ENST00000361198 ZMYM6O95789 1325 aa26.45■■□□□ 1.83
LDB1-201ENST00000361198 MYH15Q9Y2K3 1946 aa26.45■■□□□ 1.82
LDB1-201ENST00000361198 DHX16O60231 1041 aaKnown RBP26.45■■□□□ 1.82
LDB1-201ENST00000361198 NAPBQ9H115 298 aa26.45■■□□□ 1.82
LDB1-201ENST00000361198 INCENPQ9NQS7 918 aa26.45■■□□□ 1.82
LDB1-201ENST00000361198 LRP2BPQ9P2M1 347 aa26.45■■□□□ 1.82
LDB1-201ENST00000361198 ANGEL1Q9UNK9 670 aaKnown RBP26.45■■□□□ 1.82
LDB1-201ENST00000361198 MINPP1Q9UNW1 487 aa26.45■■□□□ 1.82
LDB1-201ENST00000361198 ZNF804BA4D1E1 1349 aa26.45■■□□□ 1.82
LDB1-201ENST00000361198 NEDD4P46934 1319 aa26.45■■□□□ 1.82
LDB1-201ENST00000361198 A0A1B0GUL6 1792 aa26.44■■□□□ 1.82
LDB1-201ENST00000361198 GSG1L2A8MUP6 293 aa26.44■■□□□ 1.82
LDB1-201ENST00000361198 LCORLQ8N3X6 602 aa26.44■■□□□ 1.82
LDB1-201ENST00000361198 CCNL1Q9UK58 526 aaPredicted RBP26.44■■□□□ 1.82
LDB1-201ENST00000361198 THSD7AQ9UPZ6 1657 aa26.44■■□□□ 1.82
LDB1-201ENST00000361198 PRKAB2O43741 272 aa26.44■■□□□ 1.82
LDB1-201ENST00000361198 CEBPZQ03701 1054 aaKnown RBP26.44■■□□□ 1.82
LDB1-201ENST00000361198 UBE4AQ14139 1066 aa26.44■■□□□ 1.82
LDB1-201ENST00000361198 AMIGO3Q86WK7 504 aa26.44■■□□□ 1.82
LDB1-201ENST00000361198 CCDC192P0DO97 292 aa26.43■■□□□ 1.82
LDB1-201ENST00000361198 PIBF1Q8WXW3 757 aa26.43■■□□□ 1.82
LDB1-201ENST00000361198 SETDB2Q96T68 719 aa26.43■■□□□ 1.82
LDB1-201ENST00000361198 DACT1Q9NYF0 836 aa26.43■■□□□ 1.82
LDB1-201ENST00000361198 SH2B2O14492 632 aaPredicted RBP26.42■■□□□ 1.82
LDB1-201ENST00000361198 FTOQ9C0B1 505 aaKnown RBP eCLIP26.42■■□□□ 1.824e-9■□□□□ 10.6
LDB1-201ENST00000361198 SPATA31A6Q5VVP1 1343 aa26.42■■□□□ 1.82
LDB1-201ENST00000361198 NHSQ6T4R5 1651 aa26.42■■□□□ 1.82
LDB1-201ENST00000361198 ZPR1O75312 459 aa26.42■■□□□ 1.82
LDB1-201ENST00000361198 CTDSPL2Q05D32 466 aa26.42■■□□□ 1.82
LDB1-201ENST00000361198 MIGA1Q8NAN2 632 aa26.42■■□□□ 1.82
LDB1-201ENST00000361198 NUP62CLQ9H1M0 184 aa26.42■■□□□ 1.82
LDB1-201ENST00000361198 PNPLA7Q6ZV29 1317 aa26.41■■□□□ 1.82
LDB1-201ENST00000361198 CPLX1O14810 134 aa26.41■■□□□ 1.82
LDB1-201ENST00000361198 CAMK4Q16566 473 aa26.41■■□□□ 1.82
LDB1-201ENST00000361198 ILDR1Q86SU0 546 aaPredicted RBP26.41■■□□□ 1.82
LDB1-201ENST00000361198 NYXQ9GZU5 481 aa26.41■■□□□ 1.82
LDB1-201ENST00000361198 SENP2Q9HC62 589 aa26.41■■□□□ 1.82
LDB1-201ENST00000361198 TACC3Q9Y6A5 838 aa26.41■■□□□ 1.82
LDB1-201ENST00000361198 OTUD7BQ6GQQ9 843 aa26.41■■□□□ 1.82
LDB1-201ENST00000361198 SASS6Q6UVJ0 657 aa26.41■■□□□ 1.82
LDB1-201ENST00000361198 NBPF5PQ86XG9 351 aaPredicted RBP26.41■■□□□ 1.82
LDB1-201ENST00000361198 ORC3Q9UBD5 711 aaPredicted RBP26.41■■□□□ 1.82
LDB1-201ENST00000361198 ABCF2Q9UG63 623 aa26.41■■□□□ 1.82
LDB1-201ENST00000361198 SLC4A4Q9Y6R1 1079 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms