RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 CDAN1Q8IWY9 1227 aa18.97■□□□□ 0.63
GDPD3-201ENST00000360688 ELP3Q9H9T3 547 aa18.97■□□□□ 0.63
GDPD3-201ENST00000360688 ZNF521Q96K83 1311 aa18.96■□□□□ 0.63
GDPD3-201ENST00000360688 MKI67P46013 3256 aaKnown RBP18.96■□□□□ 0.63
GDPD3-201ENST00000360688 TESPA1A2RU30 521 aaPredicted RBP18.96■□□□□ 0.63
GDPD3-201ENST00000360688 CRKP46108 304 aa18.96■□□□□ 0.63
GDPD3-201ENST00000360688 CRHR2Q13324 411 aa18.96■□□□□ 0.63
GDPD3-201ENST00000360688 LRRC24Q50LG9 513 aa18.96■□□□□ 0.63
GDPD3-201ENST00000360688 OTUD7BQ6GQQ9 843 aa18.96■□□□□ 0.63
GDPD3-201ENST00000360688 ANKRD44Q8N8A2 993 aa18.96■□□□□ 0.63
GDPD3-201ENST00000360688 PTPN18Q99952 460 aa18.96■□□□□ 0.63
GDPD3-201ENST00000360688 IQSEC3Q9UPP2 1182 aaPredicted RBP18.96■□□□□ 0.63
GDPD3-201ENST00000360688 TCP10L2B9ZVM9 353 aa18.95■□□□□ 0.62
GDPD3-201ENST00000360688 MRPL50Q8N5N7 158 aaKnown RBP18.95■□□□□ 0.62
GDPD3-201ENST00000360688 OPTNQ96CV9 577 aa18.95■□□□□ 0.62
GDPD3-201ENST00000360688 TMEM39BQ9GZU3 492 aa18.95■□□□□ 0.62
GDPD3-201ENST00000360688 TNNI2P48788 182 aa18.94■□□□□ 0.62
GDPD3-201ENST00000360688 CHAF1AQ13111 956 aaPredicted RBP18.94■□□□□ 0.62
GDPD3-201ENST00000360688 METTL24Q5JXM2 366 aa18.94■□□□□ 0.62
GDPD3-201ENST00000360688 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.94■□□□□ 0.62
GDPD3-201ENST00000360688 VPS37DQ86XT2 251 aa18.94■□□□□ 0.62
GDPD3-201ENST00000360688 VGLL2Q8N8G2 317 aa18.94■□□□□ 0.62
GDPD3-201ENST00000360688 ERO1AQ96HE7 468 aa18.94■□□□□ 0.62
GDPD3-201ENST00000360688 MS4A4AQ96JQ5 239 aa18.94■□□□□ 0.62
GDPD3-201ENST00000360688 KIAA0100Q14667 2235 aaKnown RBP18.94■□□□□ 0.62
GDPD3-201ENST00000360688 PDE8BO95263 885 aa18.93■□□□□ 0.62
GDPD3-201ENST00000360688 HDLBPQ00341 1268 aaKnown RBP18.93■□□□□ 0.62
GDPD3-201ENST00000360688 CAVIN4Q5BKX8 364 aa18.93■□□□□ 0.62
GDPD3-201ENST00000360688 CD99L2Q8TCZ2 262 aa18.93■□□□□ 0.62
GDPD3-201ENST00000360688 TBC1D22AQ8WUA7 517 aa18.93■□□□□ 0.62
GDPD3-201ENST00000360688 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
GDPD3-201ENST00000360688 FRAT2O75474 233 aaPredicted RBP18.92■□□□□ 0.62
GDPD3-201ENST00000360688 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.92■□□□□ 0.62
GDPD3-201ENST00000360688 KLHDC4Q8TBB5 520 aa18.92■□□□□ 0.62
GDPD3-201ENST00000360688 MYH13Q9UKX3 1938 aa18.92■□□□□ 0.62
GDPD3-201ENST00000360688 RBBP6Q7Z6E9 1792 aaKnown RBP18.91■□□□□ 0.62
GDPD3-201ENST00000360688 MAP3K9P80192 1104 aa18.91■□□□□ 0.62
GDPD3-201ENST00000360688 SP3Q02447 781 aa18.91■□□□□ 0.62
GDPD3-201ENST00000360688 VGLL4Q14135 290 aa18.91■□□□□ 0.62
GDPD3-201ENST00000360688 BRI3BPQ8WY22 251 aa18.91■□□□□ 0.62
GDPD3-201ENST00000360688 PTPN22Q9Y2R2 807 aa18.91■□□□□ 0.62
GDPD3-201ENST00000360688 PTPRCP08575 1304 aa18.91■□□□□ 0.62
GDPD3-201ENST00000360688 BRCA2P51587 3418 aa18.9■□□□□ 0.62
GDPD3-201ENST00000360688 BCAMP50895 628 aa18.9■□□□□ 0.62
GDPD3-201ENST00000360688 CACNB3P54284 484 aa18.9■□□□□ 0.62
GDPD3-201ENST00000360688 CAP1Q01518 475 aa18.9■□□□□ 0.62
GDPD3-201ENST00000360688 INTS3Q68E01 1043 aaKnown RBP18.9■□□□□ 0.62
GDPD3-201ENST00000360688 TEKT1Q969V4 418 aa18.9■□□□□ 0.62
GDPD3-201ENST00000360688 USP44Q9H0E7 712 aa18.9■□□□□ 0.62
GDPD3-201ENST00000360688 EFCC1Q9HA90 598 aa18.9■□□□□ 0.62
GDPD3-201ENST00000360688 POTEFA5A3E0 1075 aa18.89■□□□□ 0.61
GDPD3-201ENST00000360688 SSH1Q8WYL5 1049 aa18.89■□□□□ 0.61
GDPD3-201ENST00000360688 ZDHHC15Q96MV8 337 aa18.89■□□□□ 0.61
GDPD3-201ENST00000360688 MRIQ9BWK5 157 aa18.89■□□□□ 0.61
GDPD3-201ENST00000360688 CSADQ9Y600 493 aa18.89■□□□□ 0.61
GDPD3-201ENST00000360688 KIF16BQ96L93 1317 aa18.88■□□□□ 0.61
GDPD3-201ENST00000360688 CCL15-CCL14A0A0B4J2E2 113 aa18.88■□□□□ 0.61
GDPD3-201ENST00000360688 FGFR2P21802 821 aa18.88■□□□□ 0.61
GDPD3-201ENST00000360688 GTF2A2P52657 109 aa18.88■□□□□ 0.61
GDPD3-201ENST00000360688 CCL15Q16663 113 aa18.88■□□□□ 0.61
GDPD3-201ENST00000360688 OTUD5Q96G74 571 aa18.88■□□□□ 0.61
GDPD3-201ENST00000360688 PUM3Q15397 648 aaKnown RBP18.87■□□□□ 0.61
GDPD3-201ENST00000360688 TAF1CQ15572 869 aaPredicted RBP18.87■□□□□ 0.61
GDPD3-201ENST00000360688 APOBEC3HQ6NTF7 200 aaKnown RBP18.87■□□□□ 0.61
GDPD3-201ENST00000360688 FAM83AQ86UY5 434 aa18.87■□□□□ 0.61
GDPD3-201ENST00000360688 ARMC5Q96C12 935 aa18.87■□□□□ 0.61
GDPD3-201ENST00000360688 PCDH10Q9P2E7 1040 aa18.87■□□□□ 0.61
GDPD3-201ENST00000360688 SUGT1Q9Y2Z0 365 aa18.87■□□□□ 0.61
GDPD3-201ENST00000360688 MAST3O60307 1309 aa18.86■□□□□ 0.61
GDPD3-201ENST00000360688 SPDYE5A6NIY4 337 aa18.86■□□□□ 0.61
GDPD3-201ENST00000360688 IFIT1P09914 478 aaKnown RBP18.86■□□□□ 0.61
GDPD3-201ENST00000360688 FKBP1CQ5VVH2 108 aa18.86■□□□□ 0.61
GDPD3-201ENST00000360688 FAM43AQ8N2R8 423 aa18.86■□□□□ 0.61
GDPD3-201ENST00000360688 ZFYVE28Q9HCC9 887 aa18.86■□□□□ 0.61
GDPD3-201ENST00000360688 TMOD2Q9NZR1 351 aa18.86■□□□□ 0.61
GDPD3-201ENST00000360688 SNCAIPQ9Y6H5 919 aa18.86■□□□□ 0.61
GDPD3-201ENST00000360688 E9PSI1 815 aa18.85■□□□□ 0.61
GDPD3-201ENST00000360688 RFX5P48382 616 aaPredicted RBP18.85■□□□□ 0.61
GDPD3-201ENST00000360688 HHIPL2Q6UWX4 724 aa18.85■□□□□ 0.61
GDPD3-201ENST00000360688 AK9Q5TCS8 1911 aa18.85■□□□□ 0.61
GDPD3-201ENST00000360688 EYA2O00167 538 aa18.84■□□□□ 0.61
GDPD3-201ENST00000360688 ERO1BQ86YB8 467 aa18.84■□□□□ 0.61
GDPD3-201ENST00000360688 ZKSCAN4Q969J2 545 aaPredicted RBP18.84■□□□□ 0.61
GDPD3-201ENST00000360688 WRNIP1Q96S55 665 aa18.84■□□□□ 0.61
GDPD3-201ENST00000360688 RPAP1Q9BWH6 1393 aaPredicted RBP18.84■□□□□ 0.61
GDPD3-201ENST00000360688 SLC5A1P13866 664 aa18.83■□□□□ 0.61
GDPD3-201ENST00000360688 SLFN5Q08AF3 891 aa18.83■□□□□ 0.61
GDPD3-201ENST00000360688 HOOK2Q96ED9 719 aa18.83■□□□□ 0.61
GDPD3-201ENST00000360688 ZSWIM8A7E2V4 1837 aa18.83■□□□□ 0.6
GDPD3-201ENST00000360688 IRF6O14896 467 aa18.82■□□□□ 0.6
GDPD3-201ENST00000360688 CETPP11597 493 aa18.82■□□□□ 0.6
GDPD3-201ENST00000360688 ARHGEF6Q15052 776 aa18.82■□□□□ 0.6
GDPD3-201ENST00000360688 ATG9AQ7Z3C6 839 aa18.82■□□□□ 0.6
GDPD3-201ENST00000360688 WDR66Q8TBY9 1149 aa18.82■□□□□ 0.6
GDPD3-201ENST00000360688 LPIN2Q92539 896 aa18.82■□□□□ 0.6
GDPD3-201ENST00000360688 BTBD19C9JJ37 291 aa18.81■□□□□ 0.6
GDPD3-201ENST00000360688 EN2P19622 333 aaPredicted RBP18.81■□□□□ 0.6
GDPD3-201ENST00000360688 ALDH1L2Q3SY69 923 aa18.81■□□□□ 0.6
GDPD3-201ENST00000360688 DCAF15Q66K64 600 aa18.81■□□□□ 0.6
GDPD3-201ENST00000360688 ZNF333Q96JL9 665 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms