RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 RFC4P35249 363 aa27.78■■■□□ 2.04
USP25-203ENST00000351097 TPTE2Q6XPS3 522 aa27.78■■■□□ 2.04
USP25-203ENST00000351097 CELF1Q92879 486 aaKnown RBP27.78■■■□□ 2.04
USP25-203ENST00000351097 C4AP0C0L4 1744 aa27.78■■■□□ 2.04
USP25-203ENST00000351097 TFIP11Q9UBB9 837 aaKnown RBP27.77■■■□□ 2.04
USP25-203ENST00000351097 E7EWF7 191 aa27.77■■■□□ 2.04
USP25-203ENST00000351097 BRF1Q92994 677 aa27.77■■■□□ 2.04
USP25-203ENST00000351097 NLRP3Q96P20 1036 aa27.77■■■□□ 2.04
USP25-203ENST00000351097 WWC3Q9ULE0 1092 aa27.77■■■□□ 2.04
USP25-203ENST00000351097 ZNF532Q9HCE3 1301 aa27.76■■■□□ 2.04
USP25-203ENST00000351097 PDE6AP16499 860 aa27.76■■■□□ 2.03
USP25-203ENST00000351097 RESTQ13127 1097 aa27.76■■■□□ 2.03
USP25-203ENST00000351097 MPNDQ8N594 471 aa27.76■■■□□ 2.03
USP25-203ENST00000351097 PIBF1Q8WXW3 757 aa27.76■■■□□ 2.03
USP25-203ENST00000351097 DDX19AQ9NUU7 478 aaKnown RBP27.76■■■□□ 2.03
USP25-203ENST00000351097 CCDC24Q8N4L8 307 aa27.76■■■□□ 2.03
USP25-203ENST00000351097 FAM200AQ8TCP9 573 aa27.76■■■□□ 2.03
USP25-203ENST00000351097 LLPHQ9BRT6 129 aaKnown RBP27.76■■■□□ 2.03
USP25-203ENST00000351097 CTNNA3Q9UI47 895 aa27.76■■■□□ 2.03
USP25-203ENST00000351097 TAF1P21675 1872 aa27.76■■■□□ 2.03
USP25-203ENST00000351097 TCRBV5S4A2TA0A5A2 114 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 FGAP02671 866 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 FGD1P98174 961 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 DHX32Q7L7V1 743 aaKnown RBP27.75■■■□□ 2.03
USP25-203ENST00000351097 ZNF830Q96NB3 372 aaPredicted RBP27.75■■■□□ 2.03
USP25-203ENST00000351097 DACT1Q9NYF0 836 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 MINPP1Q9UNW1 487 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 MYO5AQ9Y4I1 1855 aaKnown RBP27.75■■■□□ 2.03
USP25-203ENST00000351097 H3BQV1 296 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 PLCB2Q00722 1185 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 IFFO2Q5TF58 517 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 SASS6Q6UVJ0 657 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 KRT27Q7Z3Y8 459 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 SMARCC2Q8TAQ2 1214 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 TNMDQ9H2S6 317 aa27.75■■■□□ 2.03
USP25-203ENST00000351097 ZSCAN16Q9H4T2 348 aaPredicted RBP27.75■■■□□ 2.03
USP25-203ENST00000351097 PFKFB2O60825 505 aa27.74■■■□□ 2.03
USP25-203ENST00000351097 TYRO3Q06418 890 aa27.74■■■□□ 2.03
USP25-203ENST00000351097 SCRN1Q12765 414 aa27.74■■■□□ 2.03
USP25-203ENST00000351097 CAMK4Q16566 473 aa27.74■■■□□ 2.03
USP25-203ENST00000351097 TTC12Q9H892 705 aaPredicted RBP27.74■■■□□ 2.03
USP25-203ENST00000351097 UQCRHLA0A096LP55 91 aa27.73■■■□□ 2.03
USP25-203ENST00000351097 WTIPA6NIX2 430 aaPredicted RBP27.73■■■□□ 2.03
USP25-203ENST00000351097 AP5Z1O43299 807 aa27.73■■■□□ 2.03
USP25-203ENST00000351097 UQCRHP07919 91 aa27.73■■■□□ 2.03
USP25-203ENST00000351097 EXOSC10Q01780 885 aaKnown RBP27.73■■■□□ 2.03
USP25-203ENST00000351097 LRRC2Q9BYS8 371 aa27.73■■■□□ 2.03
USP25-203ENST00000351097 MRVI1Q9Y6F6 885 aa27.73■■■□□ 2.03
USP25-203ENST00000351097 A0A1B0GUL6 1792 aa27.72■■■□□ 2.03
USP25-203ENST00000351097 ZNF804BA4D1E1 1349 aa27.72■■■□□ 2.03
USP25-203ENST00000351097 LAMA4Q16363 1823 aa27.72■■■□□ 2.03
USP25-203ENST00000351097 UBE4AQ14139 1066 aa27.72■■■□□ 2.03
USP25-203ENST00000351097 IMMTQ16891 758 aaKnown RBP27.72■■■□□ 2.03
USP25-203ENST00000351097 RBM43Q6ZSC3 357 aaKnown RBP27.72■■■□□ 2.03
USP25-203ENST00000351097 DDX11Q96FC9 970 aa27.72■■■□□ 2.03
USP25-203ENST00000351097 CLSTN2Q9H4D0 955 aa27.72■■■□□ 2.03
USP25-203ENST00000351097 ADRA2BP18089 450 aa27.71■■■□□ 2.03
USP25-203ENST00000351097 RPS8P62241 208 aaKnown RBP27.71■■■□□ 2.03
USP25-203ENST00000351097 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.7■■■□□ 2.03
USP25-203ENST00000351097 HAND2P61296 217 aa27.7■■■□□ 2.03
USP25-203ENST00000351097 MAP3K12Q12852 859 aa27.7■■■□□ 2.03
USP25-203ENST00000351097 NFIXQ14938 502 aa27.7■■■□□ 2.03
USP25-203ENST00000351097 PGBD1Q96JS3 809 aa27.7■■■□□ 2.03
USP25-203ENST00000351097 BRWD3Q6RI45 1802 aa27.7■■■□□ 2.03
USP25-203ENST00000351097 DOCK2Q92608 1830 aa27.7■■■□□ 2.03
USP25-203ENST00000351097 TRIM37O94972 964 aa27.7■■■□□ 2.02
USP25-203ENST00000351097 NOLC1Q14978 699 aaKnown RBP eCLIP27.7■■■□□ 2.02
USP25-203ENST00000351097 AGXT2Q9BYV1 514 aa27.7■■■□□ 2.02
USP25-203ENST00000351097 CFAP45Q9UL16 551 aa27.7■■■□□ 2.02
USP25-203ENST00000351097 CARMIL3Q8ND23 1372 aa27.7■■■□□ 2.02
USP25-203ENST00000351097 TPM3P06753 285 aa27.69■■■□□ 2.02
USP25-203ENST00000351097 TM4SF1P30408 202 aa27.69■■■□□ 2.02
USP25-203ENST00000351097 GYG1P46976 350 aa27.69■■■□□ 2.02
USP25-203ENST00000351097 SLC27A3Q5K4L6 730 aa27.69■■■□□ 2.02
USP25-203ENST00000351097 MAGEB6Q8N7X4 407 aa27.69■■■□□ 2.02
USP25-203ENST00000351097 NSUN7Q8NE18 718 aaKnown RBP27.69■■■□□ 2.02
USP25-203ENST00000351097 BICD2Q8TD16 824 aa27.69■■■□□ 2.02
USP25-203ENST00000351097 HMGN5P82970 282 aaKnown RBP27.69■■■□□ 2.02
USP25-203ENST00000351097 NAA16Q6N069 864 aaPredicted RBP27.69■■■□□ 2.02
USP25-203ENST00000351097 CKAP2LQ8IYA6 745 aa27.69■■■□□ 2.02
USP25-203ENST00000351097 UBE2Q2Q8WVN8 375 aa27.69■■■□□ 2.02
USP25-203ENST00000351097 KIF3AQ9Y496 699 aa27.68■■■□□ 2.02
USP25-203ENST00000351097 NR1I2O75469 434 aa27.67■■■□□ 2.02
USP25-203ENST00000351097 APOBRQ0VD83 1088 aa27.67■■■□□ 2.02
USP25-203ENST00000351097 STRBPQ96SI9 672 aaKnown RBP27.67■■■□□ 2.02
USP25-203ENST00000351097 IQSEC3Q9UPP2 1182 aaPredicted RBP27.67■■■□□ 2.02
USP25-203ENST00000351097 GOLGA6L6A8MZA4 724 aa27.66■■■□□ 2.02
USP25-203ENST00000351097 ZNF213O14771 459 aa27.66■■■□□ 2.02
USP25-203ENST00000351097 AIDAQ96BJ3 306 aa27.66■■■□□ 2.02
USP25-203ENST00000351097 SPTLC3Q9NUV7 552 aa27.66■■■□□ 2.02
USP25-203ENST00000351097 TNRC6CQ9HCJ0 1690 aaKnown RBP27.66■■■□□ 2.02
USP25-203ENST00000351097 DYNC1I1O14576 645 aa27.66■■■□□ 2.02
USP25-203ENST00000351097 NPHP1O15259 732 aa27.66■■■□□ 2.02
USP25-203ENST00000351097 ANO6Q4KMQ2 910 aa27.66■■■□□ 2.02
USP25-203ENST00000351097 DNTTIP2Q5QJE6 756 aaKnown RBP27.66■■■□□ 2.02
USP25-203ENST00000351097 CHST3Q7LGC8 479 aa27.66■■■□□ 2.02
USP25-203ENST00000351097 PDCL3Q9H2J4 239 aa27.66■■■□□ 2.02
USP25-203ENST00000351097 UBR3Q6ZT12 1888 aa27.66■■■□□ 2.02
USP25-203ENST00000351097 PTPDC1A2A3K4 754 aa27.65■■■□□ 2.02
USP25-203ENST00000351097 CTDNEP1O95476 244 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms