RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 CRKP46108 304 aa12.67□□□□□ -0.38
SNRPD2-201ENST00000342669 LRRC24Q50LG9 513 aa12.67□□□□□ -0.38
SNRPD2-201ENST00000342669 OTUD7BQ6GQQ9 843 aa12.67□□□□□ -0.38
SNRPD2-201ENST00000342669 FBXO46Q6PJ61 603 aaPredicted RBP12.67□□□□□ -0.38
SNRPD2-201ENST00000342669 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
SNRPD2-201ENST00000342669 DZIP1LQ8IYY4 767 aaKnown RBP12.67□□□□□ -0.38
SNRPD2-201ENST00000342669 ANKRD13AQ8IZ07 590 aa12.67□□□□□ -0.38
SNRPD2-201ENST00000342669 ANKRD44Q8N8A2 993 aa12.67□□□□□ -0.38
SNRPD2-201ENST00000342669 TBC1D22AQ8WUA7 517 aa12.67□□□□□ -0.38
SNRPD2-201ENST00000342669 R3HDMLQ9H3Y0 253 aa12.67□□□□□ -0.38
SNRPD2-201ENST00000342669 OTOFQ9HC10 1997 aa12.67□□□□□ -0.38
SNRPD2-201ENST00000342669 PDE8BO95263 885 aa12.66□□□□□ -0.38
SNRPD2-201ENST00000342669 TNNI2P48788 182 aa12.66□□□□□ -0.38
SNRPD2-201ENST00000342669 CHAF1AQ13111 956 aaPredicted RBP12.66□□□□□ -0.38
SNRPD2-201ENST00000342669 SSH1Q8WYL5 1049 aa12.66□□□□□ -0.38
SNRPD2-201ENST00000342669 IQSEC3Q9UPP2 1182 aaPredicted RBP12.66□□□□□ -0.38
SNRPD2-201ENST00000342669 CENPFP49454 3210 aa12.65□□□□□ -0.38
SNRPD2-201ENST00000342669 TCP10L2B9ZVM9 353 aa12.65□□□□□ -0.38
SNRPD2-201ENST00000342669 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
SNRPD2-201ENST00000342669 USP44Q9H0E7 712 aa12.65□□□□□ -0.38
SNRPD2-201ENST00000342669 IGF2BP3O00425 579 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNRPD2-201ENST00000342669 IFIT1P09914 478 aaKnown RBP12.64□□□□□ -0.39
SNRPD2-201ENST00000342669 GJA5P36382 358 aa12.64□□□□□ -0.39
SNRPD2-201ENST00000342669 C1QBPQ07021 282 aaKnown RBP12.64□□□□□ -0.39
SNRPD2-201ENST00000342669 SLFN5Q08AF3 891 aa12.64□□□□□ -0.39
SNRPD2-201ENST00000342669 PUM3Q15397 648 aaKnown RBP12.64□□□□□ -0.39
SNRPD2-201ENST00000342669 VGLL2Q8N8G2 317 aa12.64□□□□□ -0.39
SNRPD2-201ENST00000342669 KLHDC4Q8TBB5 520 aa12.64□□□□□ -0.39
SNRPD2-201ENST00000342669 TEKT1Q969V4 418 aa12.64□□□□□ -0.39
SNRPD2-201ENST00000342669 ELP3Q9H9T3 547 aa12.64□□□□□ -0.39
SNRPD2-201ENST00000342669 AK9Q5TCS8 1911 aa12.64□□□□□ -0.39
SNRPD2-201ENST00000342669 BCAMP50895 628 aa12.63□□□□□ -0.39
SNRPD2-201ENST00000342669 GRIK5Q16478 980 aa12.63□□□□□ -0.39
SNRPD2-201ENST00000342669 ALDH1L2Q3SY69 923 aa12.63□□□□□ -0.39
SNRPD2-201ENST00000342669 OPTNQ96CV9 577 aa12.63□□□□□ -0.39
SNRPD2-201ENST00000342669 TEPSINQ96N21 525 aa12.63□□□□□ -0.39
SNRPD2-201ENST00000342669 TMEM39BQ9GZU3 492 aa12.63□□□□□ -0.39
SNRPD2-201ENST00000342669 TMOD2Q9NZR1 351 aa12.63□□□□□ -0.39
SNRPD2-201ENST00000342669 SUGT1Q9Y2Z0 365 aa12.63□□□□□ -0.39
SNRPD2-201ENST00000342669 TRIM17Q9Y577 477 aa12.63□□□□□ -0.39
SNRPD2-201ENST00000342669 CSADQ9Y600 493 aa12.63□□□□□ -0.39
SNRPD2-201ENST00000342669 MAST3O60307 1309 aa12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 TESPA1A2RU30 521 aaPredicted RBP12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 SLC34A2O95436 690 aa12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 SLC5A1P13866 664 aa12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 MAP3K9P80192 1104 aa12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 CRHR2Q13324 411 aa12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 ERO1AQ96HE7 468 aa12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 ZDHHC15Q96MV8 337 aa12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 MRIQ9BWK5 157 aa12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 SMC4Q9NTJ3 1288 aa12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 HTTP42858 3142 aa12.62□□□□□ -0.39
SNRPD2-201ENST00000342669 EYA2O00167 538 aa12.61□□□□□ -0.39
SNRPD2-201ENST00000342669 FGFR2P21802 821 aa12.61□□□□□ -0.39
SNRPD2-201ENST00000342669 VGLL4Q14135 290 aa12.61□□□□□ -0.39
SNRPD2-201ENST00000342669 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.61□□□□□ -0.39
SNRPD2-201ENST00000342669 OTOP1Q7RTM1 612 aa12.61□□□□□ -0.39
SNRPD2-201ENST00000342669 CDAN1Q8IWY9 1227 aa12.61□□□□□ -0.39
SNRPD2-201ENST00000342669 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.61□□□□□ -0.395e-7■■□□□ 11.9
SNRPD2-201ENST00000342669 LPIN2Q92539 896 aa12.61□□□□□ -0.39
SNRPD2-201ENST00000342669 HOOK2Q96ED9 719 aa12.61□□□□□ -0.39
SNRPD2-201ENST00000342669 PTPN18Q99952 460 aa12.61□□□□□ -0.39
SNRPD2-201ENST00000342669 RFX5P48382 616 aaPredicted RBP12.6□□□□□ -0.39
SNRPD2-201ENST00000342669 GTF2A2P52657 109 aa12.6□□□□□ -0.39
SNRPD2-201ENST00000342669 CACNB3P54284 484 aa12.6□□□□□ -0.39
SNRPD2-201ENST00000342669 SP3Q02447 781 aa12.6□□□□□ -0.39
SNRPD2-201ENST00000342669 FKBP1CQ5VVH2 108 aa12.6□□□□□ -0.39
SNRPD2-201ENST00000342669 HHIPL2Q6UWX4 724 aa12.6□□□□□ -0.39
SNRPD2-201ENST00000342669 FAM83AQ86UY5 434 aa12.6□□□□□ -0.39
SNRPD2-201ENST00000342669 WDR66Q8TBY9 1149 aa12.6□□□□□ -0.39
SNRPD2-201ENST00000342669 CDCA7LQ96GN5 454 aa12.6□□□□□ -0.39
SNRPD2-201ENST00000342669 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
SNRPD2-201ENST00000342669 MKI67P46013 3256 aaKnown RBP12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 CCL15-CCL14A0A0B4J2E2 113 aa12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 CT47B1P0C2W7 299 aaPredicted RBP12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 UBTFL1P0CB47 393 aaPredicted RBP12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 CCL15Q16663 113 aa12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 INTS3Q68E01 1043 aaKnown RBP12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 APOBEC3HQ6NTF7 200 aaKnown RBP12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 CD99L2Q8TCZ2 262 aa12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 OTUD5Q96G74 571 aa12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 EFCC1Q9HA90 598 aa12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 ZFYVE28Q9HCC9 887 aa12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 HDAC5Q9UQL6 1122 aa12.59□□□□□ -0.39
SNRPD2-201ENST00000342669 WDHD1O75717 1129 aaPredicted RBP12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 ARHGEF6Q15052 776 aa12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 TAF1CQ15572 869 aaPredicted RBP12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 DCAF15Q66K64 600 aa12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 ATG9AQ7Z3C6 839 aa12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 ERO1BQ86YB8 467 aa12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 TRMT2AQ8IZ69 625 aaKnown RBP12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 BRI3BPQ8WY22 251 aa12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 WRNIP1Q96S55 665 aa12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 SIL1Q9H173 461 aa12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 GNL3LQ9NVN8 582 aaKnown RBP12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 CEP126Q9P2H0 1117 aa12.58□□□□□ -0.4
SNRPD2-201ENST00000342669 PTPN22Q9Y2R2 807 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms