RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MECOMQ03112 1051 aa17.64■□□□□ 0.41
CDK5RAP3-201ENST00000338399 DCAF8Q5TAQ9 597 aa17.64■□□□□ 0.41
CDK5RAP3-201ENST00000338399 RNF20Q5VTR2 975 aa17.64■□□□□ 0.41
CDK5RAP3-201ENST00000338399 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.41
CDK5RAP3-201ENST00000338399 STRBPQ96SI9 672 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-201ENST00000338399 ARMT1Q9H993 441 aa17.64■□□□□ 0.41
CDK5RAP3-201ENST00000338399 MAST2Q6P0Q8 1798 aa17.64■□□□□ 0.41
CDK5RAP3-201ENST00000338399 CD2BP2O95400 341 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-201ENST00000338399 LDHBP07195 334 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-201ENST00000338399 CCDC93Q567U6 631 aa17.63■□□□□ 0.41
CDK5RAP3-201ENST00000338399 SNX21Q969T3 373 aa17.63■□□□□ 0.41
CDK5RAP3-201ENST00000338399 CD2APQ9Y5K6 639 aa17.63■□□□□ 0.41
CDK5RAP3-201ENST00000338399 BRCA1P38398 1863 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-201ENST00000338399 NEK4P51957 841 aa17.63■□□□□ 0.41
CDK5RAP3-201ENST00000338399 GTF2IP78347 998 aa17.63■□□□□ 0.41
CDK5RAP3-201ENST00000338399 GRIK5Q16478 980 aa17.63■□□□□ 0.41
CDK5RAP3-201ENST00000338399 HSCBQ8IWL3 235 aa17.63■□□□□ 0.41
CDK5RAP3-201ENST00000338399 DBNDD1Q9H9R9 158 aa17.63■□□□□ 0.41
CDK5RAP3-201ENST00000338399 CYP21A2P08686 494 aa17.62■□□□□ 0.41
CDK5RAP3-201ENST00000338399 ADCK5Q3MIX3 580 aa17.62■□□□□ 0.41
CDK5RAP3-201ENST00000338399 GRIPAP1Q4V328 841 aa17.62■□□□□ 0.41
CDK5RAP3-201ENST00000338399 DZIP1Q86YF9 867 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-201ENST00000338399 RTKN2Q8IZC4 609 aa17.62■□□□□ 0.41
CDK5RAP3-201ENST00000338399 LCORLQ8N3X6 602 aa17.62■□□□□ 0.41
CDK5RAP3-201ENST00000338399 SUPT20HQ8NEM7 779 aa17.62■□□□□ 0.41
CDK5RAP3-201ENST00000338399 FBXW7Q969H0 707 aa17.62■□□□□ 0.41
CDK5RAP3-201ENST00000338399 UPF3BQ9BZI7 483 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-201ENST00000338399 TAF6LQ9Y6J9 622 aa17.62■□□□□ 0.41
CDK5RAP3-201ENST00000338399 FAM205AQ6ZU69 1335 aa17.61■□□□□ 0.41
CDK5RAP3-201ENST00000338399 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
CDK5RAP3-201ENST00000338399 DALRD3Q5D0E6 543 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-201ENST00000338399 MFSD14BQ5SR56 506 aa17.61■□□□□ 0.41
CDK5RAP3-201ENST00000338399 ST18O60284 1047 aa17.61■□□□□ 0.41
CDK5RAP3-201ENST00000338399 FGAP02671 866 aa17.61■□□□□ 0.41
CDK5RAP3-201ENST00000338399 APPP05067 770 aa17.61■□□□□ 0.41
CDK5RAP3-201ENST00000338399 AOC3Q16853 763 aa17.61■□□□□ 0.41
CDK5RAP3-201ENST00000338399 TTLL5Q6EMB2 1281 aa17.61■□□□□ 0.41
CDK5RAP3-201ENST00000338399 TBC1D22AQ8WUA7 517 aa17.61■□□□□ 0.41
CDK5RAP3-201ENST00000338399 JAKMIP1Q96N16 626 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-201ENST00000338399 DYNLL1P63167 89 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-201ENST00000338399 TSGA10IPQ3SY00 556 aa17.6■□□□□ 0.41
CDK5RAP3-201ENST00000338399 PODNQ7Z5L7 613 aa17.6■□□□□ 0.41
CDK5RAP3-201ENST00000338399 RIOK1Q9BRS2 568 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-201ENST00000338399 SPON1Q9HCB6 807 aa17.6■□□□□ 0.41
CDK5RAP3-201ENST00000338399 CTNNA3Q9UI47 895 aa17.6■□□□□ 0.41
CDK5RAP3-201ENST00000338399 MYH2Q9UKX2 1941 aa17.59■□□□□ 0.41
CDK5RAP3-201ENST00000338399 PATL2C9JE40 543 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-201ENST00000338399 PRKAB2O43741 272 aa17.59■□□□□ 0.41
CDK5RAP3-201ENST00000338399 CASTP20810 708 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-201ENST00000338399 KIAA2012Q0VF49 1180 aa17.59■□□□□ 0.41
CDK5RAP3-201ENST00000338399 GOLGB1Q14789 3259 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-201ENST00000338399 PPIP5K2O43314 1243 aa17.58■□□□□ 0.41
CDK5RAP3-201ENST00000338399 ECE2O60344 883 aa17.58■□□□□ 0.41
CDK5RAP3-201ENST00000338399 IGSF3O75054 1194 aa17.58■□□□□ 0.41
CDK5RAP3-201ENST00000338399 CPA1P15085 419 aa17.58■□□□□ 0.41
CDK5RAP3-201ENST00000338399 SOGA3Q5TF21 947 aa17.58■□□□□ 0.41
CDK5RAP3-201ENST00000338399 TMED8Q6PL24 325 aaPredicted RBP17.58■□□□□ 0.41
CDK5RAP3-201ENST00000338399 PSMD1Q99460 953 aa17.58■□□□□ 0.41
CDK5RAP3-201ENST00000338399 TM6SF1Q9BZW5 370 aa17.58■□□□□ 0.41
CDK5RAP3-201ENST00000338399 KCNQ5Q9NR82 932 aa17.58■□□□□ 0.41
CDK5RAP3-201ENST00000338399 SLC4A4Q9Y6R1 1079 aa17.58■□□□□ 0.41
CDK5RAP3-201ENST00000338399 SCN9AQ15858 1988 aa17.58■□□□□ 0.41
CDK5RAP3-201ENST00000338399 GNAT2P19087 354 aa17.58■□□□□ 0.4
CDK5RAP3-201ENST00000338399 DIXDC1Q155Q3 683 aa17.58■□□□□ 0.4
CDK5RAP3-201ENST00000338399 AATFQ9NY61 560 aaKnown RBP eCLIP17.58■□□□□ 0.4
CDK5RAP3-201ENST00000338399 RPAP1Q9BWH6 1393 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-201ENST00000338399 GSG1L2A8MUP6 293 aa17.57■□□□□ 0.4
CDK5RAP3-201ENST00000338399 PSMA5P28066 241 aa17.57■□□□□ 0.4
CDK5RAP3-201ENST00000338399 HAND2P61296 217 aa17.57■□□□□ 0.4
CDK5RAP3-201ENST00000338399 GSTO1P78417 241 aa17.57■□□□□ 0.4
CDK5RAP3-201ENST00000338399 KRT32Q14532 448 aa17.57■□□□□ 0.4
CDK5RAP3-201ENST00000338399 IFNL3Q8IZI9 196 aa17.57■□□□□ 0.4
CDK5RAP3-201ENST00000338399 ZSWIM6Q9HCJ5 1215 aa17.57■□□□□ 0.4
CDK5RAP3-201ENST00000338399 EPB41L4AQ9HCS5 686 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-201ENST00000338399 K7ELQ4 463 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 IMMTQ16891 758 aaKnown RBP17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 CERS5Q8N5B7 392 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 NLGN2Q8NFZ4 835 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 MXD3Q9BW11 206 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 CYP46A1Q9Y6A2 500 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 LAMA4Q16363 1823 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 LDHCP07864 332 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 COL9A3Q14050 684 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 ALX1Q15699 326 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 STOX1Q6ZVD7 989 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 RUFY3Q7L099 469 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 SDR42E1Q8WUS8 393 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 NAPBQ9H115 298 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 BCS1LQ9Y276 419 aa17.56■□□□□ 0.4
CDK5RAP3-201ENST00000338399 ZNF213O14771 459 aa17.55■□□□□ 0.4
CDK5RAP3-201ENST00000338399 BLOC1S2Q6QNY1 142 aa17.55■□□□□ 0.4
CDK5RAP3-201ENST00000338399 SPRYD3Q8NCJ5 442 aa17.55■□□□□ 0.4
CDK5RAP3-201ENST00000338399 NEK1Q96PY6 1258 aa17.55■□□□□ 0.4
CDK5RAP3-201ENST00000338399 FER1L6Q2WGJ9 1857 aa17.55■□□□□ 0.4
CDK5RAP3-201ENST00000338399 ZNF646O15015 1829 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 E7EWF7 191 aa17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 F8W031 263 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 TTC14Q96N46 770 aa17.54■□□□□ 0.4
CDK5RAP3-201ENST00000338399 NACAP1Q9BZK3 213 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms