RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 FRAT1Q92837 279 aaPredicted RBP18.33■□□□□ 0.52
TSPO-201ENST00000329563 PA2G4Q9UQ80 394 aaKnown RBP18.33■□□□□ 0.52
TSPO-201ENST00000329563 PPP1R12BO60237 982 aaPredicted RBP18.32■□□□□ 0.52
TSPO-201ENST00000329563 TM4SF4P48230 202 aa18.32■□□□□ 0.52
TSPO-201ENST00000329563 RBM5P52756 815 aaKnown RBP eCLIP18.32■□□□□ 0.52
TSPO-201ENST00000329563 SUPT20HL1Q3ZLR7 823 aa18.32■□□□□ 0.52
TSPO-201ENST00000329563 LDLRAD1Q5T700 205 aa18.32■□□□□ 0.52
TSPO-201ENST00000329563 SERPINA10Q9UK55 444 aa18.32■□□□□ 0.52
TSPO-201ENST00000329563 UNCXA6NJT0 531 aa18.31■□□□□ 0.52
TSPO-201ENST00000329563 ALDH1A1P00352 501 aa18.31■□□□□ 0.52
TSPO-201ENST00000329563 SPDYE2Q495Y8 402 aa18.31■□□□□ 0.52
TSPO-201ENST00000329563 CAVIN4Q5BKX8 364 aa18.31■□□□□ 0.52
TSPO-201ENST00000329563 NOM1Q5C9Z4 860 aaKnown RBP18.31■□□□□ 0.52
TSPO-201ENST00000329563 VPS37DQ86XT2 251 aa18.31■□□□□ 0.52
TSPO-201ENST00000329563 CDAN1Q8IWY9 1227 aa18.31■□□□□ 0.52
TSPO-201ENST00000329563 TDRD3Q9H7E2 651 aaKnown RBP18.31■□□□□ 0.52
TSPO-201ENST00000329563 VEZTQ9HBM0 779 aa18.31■□□□□ 0.52
TSPO-201ENST00000329563 ZNF70Q9UC06 446 aaPredicted RBP18.31■□□□□ 0.52
TSPO-201ENST00000329563 ANGEL1Q9UNK9 670 aaKnown RBP18.31■□□□□ 0.52
TSPO-201ENST00000329563 MYH13Q9UKX3 1938 aa18.31■□□□□ 0.52
TSPO-201ENST00000329563 OTOFQ9HC10 1997 aa18.3■□□□□ 0.52
TSPO-201ENST00000329563 CIAO1O76071 339 aa18.3■□□□□ 0.52
TSPO-201ENST00000329563 CRKP46108 304 aa18.3■□□□□ 0.52
TSPO-201ENST00000329563 MKRN3Q13064 507 aaKnown RBP18.3■□□□□ 0.52
TSPO-201ENST00000329563 TNFAIP1Q13829 316 aa18.3■□□□□ 0.52
TSPO-201ENST00000329563 PDE3AQ14432 1141 aa18.3■□□□□ 0.52
TSPO-201ENST00000329563 NBPF12Q5TAG4 269 aaPredicted RBP18.3■□□□□ 0.52
TSPO-201ENST00000329563 ATF7IPQ6VMQ6 1270 aa18.3■□□□□ 0.52
TSPO-201ENST00000329563 DZIP1LQ8IYY4 767 aaKnown RBP18.3■□□□□ 0.52
TSPO-201ENST00000329563 LPIN2Q92539 896 aa18.3■□□□□ 0.52
TSPO-201ENST00000329563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.3■□□□□ 0.52
TSPO-201ENST00000329563 NEFLP07196 543 aa18.29■□□□□ 0.52
TSPO-201ENST00000329563 IFIT1P09914 478 aaKnown RBP18.29■□□□□ 0.52
TSPO-201ENST00000329563 INHBEP58166 350 aa18.29■□□□□ 0.52
TSPO-201ENST00000329563 RASA3Q14644 834 aa18.29■□□□□ 0.52
TSPO-201ENST00000329563 MAP3K11Q16584 847 aa18.29■□□□□ 0.52
TSPO-201ENST00000329563 CLUAP1Q96AJ1 413 aa18.29■□□□□ 0.52
TSPO-201ENST00000329563 CLMNQ96JQ2 1002 aa18.29■□□□□ 0.52
TSPO-201ENST00000329563 TEPSINQ96N21 525 aa18.29■□□□□ 0.52
TSPO-201ENST00000329563 LAMB1P07942 1786 aa18.29■□□□□ 0.52
TSPO-201ENST00000329563 MANSC4A6NHS7 340 aaPredicted RBP18.28■□□□□ 0.52
TSPO-201ENST00000329563 ZBTB48P10074 688 aaPredicted RBP18.28■□□□□ 0.52
TSPO-201ENST00000329563 SLC10A4Q96EP9 437 aa18.28■□□□□ 0.52
TSPO-201ENST00000329563 COPRSQ9NQ92 184 aa18.28■□□□□ 0.52
TSPO-201ENST00000329563 FBXO3Q9UK99 471 aa18.28■□□□□ 0.52
TSPO-201ENST00000329563 FRAT2O75474 233 aaPredicted RBP18.27■□□□□ 0.52
TSPO-201ENST00000329563 TBC1D8O95759 1140 aa18.27■□□□□ 0.52
TSPO-201ENST00000329563 SLC5A1P13866 664 aa18.27■□□□□ 0.52
TSPO-201ENST00000329563 IREB2P48200 963 aaKnown RBP18.27■□□□□ 0.52
TSPO-201ENST00000329563 SPRYD7Q5W111 196 aa18.27■□□□□ 0.52
TSPO-201ENST00000329563 ZNF296Q8WUU4 475 aaPredicted RBP18.27■□□□□ 0.52
TSPO-201ENST00000329563 CFHR5Q9BXR6 569 aa18.27■□□□□ 0.52
TSPO-201ENST00000329563 USP2O75604 605 aaPredicted RBP18.26■□□□□ 0.51
TSPO-201ENST00000329563 ADORA1P30542 326 aa18.26■□□□□ 0.51
TSPO-201ENST00000329563 CACNB3P54284 484 aa18.26■□□□□ 0.51
TSPO-201ENST00000329563 MTX1Q13505 466 aa18.26■□□□□ 0.51
TSPO-201ENST00000329563 ATP2B3Q16720 1220 aa18.26■□□□□ 0.51
TSPO-201ENST00000329563 FTSJ3Q8IY81 847 aaKnown RBP18.26■□□□□ 0.51
TSPO-201ENST00000329563 TBC1D22AQ8WUA7 517 aa18.26■□□□□ 0.51
TSPO-201ENST00000329563 TCP10L2B9ZVM9 353 aa18.25■□□□□ 0.51
TSPO-201ENST00000329563 GPR25O00155 361 aa18.25■□□□□ 0.51
TSPO-201ENST00000329563 GNAI3P08754 354 aa18.25■□□□□ 0.51
TSPO-201ENST00000329563 IL15P40933 162 aaPredicted RBP18.25■□□□□ 0.51
TSPO-201ENST00000329563 HDLBPQ00341 1268 aaKnown RBP18.25■□□□□ 0.51
TSPO-201ENST00000329563 OTUD7BQ6GQQ9 843 aa18.25■□□□□ 0.51
TSPO-201ENST00000329563 APOBEC3HQ6NTF7 200 aaKnown RBP18.25■□□□□ 0.51
TSPO-201ENST00000329563 TMEM39BQ9GZU3 492 aa18.25■□□□□ 0.51
TSPO-201ENST00000329563 CEP126Q9P2H0 1117 aa18.25■□□□□ 0.51
TSPO-201ENST00000329563 SRGAP3O43295 1099 aa18.24■□□□□ 0.51
TSPO-201ENST00000329563 FKTNO75072 461 aa18.24■□□□□ 0.51
TSPO-201ENST00000329563 PHKA1P46020 1223 aa18.24■□□□□ 0.51
TSPO-201ENST00000329563 TNNI2P48788 182 aa18.24■□□□□ 0.51
TSPO-201ENST00000329563 TMEM57Q8N5G2 664 aa18.24■□□□□ 0.51
TSPO-201ENST00000329563 TEKT1Q969V4 418 aa18.24■□□□□ 0.51
TSPO-201ENST00000329563 ZDHHC15Q96MV8 337 aa18.24■□□□□ 0.51
TSPO-201ENST00000329563 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.24■□□□□ 0.51
TSPO-201ENST00000329563 PNMA6EA0A0J9YXQ4 647 aa18.23■□□□□ 0.51
TSPO-201ENST00000329563 PRDX5P30044 214 aa18.23■□□□□ 0.51
TSPO-201ENST00000329563 GJA5P36382 358 aa18.23■□□□□ 0.51
TSPO-201ENST00000329563 ANKRD13AQ8IZ07 590 aa18.23■□□□□ 0.51
TSPO-201ENST00000329563 MRIQ9BWK5 157 aa18.23■□□□□ 0.51
TSPO-201ENST00000329563 HPS5Q9UPZ3 1129 aa18.23■□□□□ 0.51
TSPO-201ENST00000329563 TNRC18O15417 2968 aaPredicted RBP18.23■□□□□ 0.51
TSPO-201ENST00000329563 SOX10P56693 466 aa18.22■□□□□ 0.51
TSPO-201ENST00000329563 TIMM10P62072 90 aa18.22■□□□□ 0.51
TSPO-201ENST00000329563 TFCP2Q12800 502 aa18.22■□□□□ 0.51
TSPO-201ENST00000329563 DIXDC1Q155Q3 683 aa18.22■□□□□ 0.51
TSPO-201ENST00000329563 WNK4Q96J92 1243 aa18.22■□□□□ 0.51
TSPO-201ENST00000329563 R3HDMLQ9H3Y0 253 aa18.22■□□□□ 0.51
TSPO-201ENST00000329563 CHMP4BQ9H444 224 aaKnown RBP18.22■□□□□ 0.51
TSPO-201ENST00000329563 HDAC5Q9UQL6 1122 aa18.22■□□□□ 0.51
TSPO-201ENST00000329563 RLBP1P12271 317 aa18.21■□□□□ 0.51
TSPO-201ENST00000329563 CCDC102BQ68D86 513 aa18.21■□□□□ 0.51
TSPO-201ENST00000329563 FBXO46Q6PJ61 603 aaPredicted RBP18.21■□□□□ 0.51
TSPO-201ENST00000329563 HHIPL2Q6UWX4 724 aa18.21■□□□□ 0.51
TSPO-201ENST00000329563 IFNL1Q8IU54 200 aa18.21■□□□□ 0.51
TSPO-201ENST00000329563 WDR66Q8TBY9 1149 aa18.21■□□□□ 0.51
TSPO-201ENST00000329563 SUGT1Q9Y2Z0 365 aa18.21■□□□□ 0.51
TSPO-201ENST00000329563 GNAI2P04899 355 aa18.2■□□□□ 0.5
TSPO-201ENST00000329563 ERICH6BQ5W0A0 696 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms