RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 VGFO15240 615 aaPredicted RBP3.21□□□□□ -1.9
RGPD6-201ENST00000329516 FAM193AP78312 1265 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 AMPD2Q01433 879 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 FOXR1Q6PIV2 292 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 DBNLQ9UJU6 430 aaKnown RBP3.21□□□□□ -1.9
RGPD6-201ENST00000329516 MRVI1Q9Y6F6 885 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 MCM10Q7L590 875 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 PLCD3Q8N3E9 789 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 INCENPQ9NQS7 918 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 TBX22Q9Y458 520 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 DOCK1Q14185 1865 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 TCF20Q9UGU0 1960 aaKnown RBP3.21□□□□□ -1.9
RGPD6-201ENST00000329516 F6X3S4 739 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 PLCB2Q00722 1185 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 ZFPM1Q8IX07 1006 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 IFT43Q96FT9 208 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 CDK19Q9BWU1 502 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 EURLQ9NYK6 297 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 A0A0D9SFI3 127 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 DPF2Q92785 391 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 L2HGDHQ9H9P8 463 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 KDM2AQ9Y2K7 1162 aa3.21□□□□□ -1.9
RGPD6-201ENST00000329516 ZNF326Q5BKZ1 582 aaKnown RBP3.2□□□□□ -1.9
RGPD6-201ENST00000329516 PIK3R5Q8WYR1 880 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 MAP4K1Q92918 833 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 RSPO3Q9BXY4 272 aaPredicted RBP3.2□□□□□ -1.9
RGPD6-201ENST00000329516 EPB41L4AQ9HCS5 686 aaPredicted RBP3.2□□□□□ -1.9
RGPD6-201ENST00000329516 RTEL1Q9NZ71 1219 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 RTN2O75298 545 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 WDHD1O75717 1129 aaPredicted RBP3.2□□□□□ -1.9
RGPD6-201ENST00000329516 H2AFXP16104 143 aaPredicted RBP3.2□□□□□ -1.9
RGPD6-201ENST00000329516 PKN1Q16512 942 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 CLASRPQ8N2M8 674 aaKnown RBP3.2□□□□□ -1.9
RGPD6-201ENST00000329516 ZBTB47Q9UFB7 747 aaPredicted RBP3.2□□□□□ -1.9
RGPD6-201ENST00000329516 FLT1P17948 1338 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 IGSF3O75054 1194 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 SLC20A2Q08357 652 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 SHROOM1Q2M3G4 852 aaPredicted RBP3.2□□□□□ -1.9
RGPD6-201ENST00000329516 TNNI3KQ59H18 835 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 FBXW7Q969H0 707 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 FPGT-TNNI3KV9GXZ4 949 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 PLXNA3P51805 1871 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 CSRP3P50461 194 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 ASTE1Q2TB18 679 aaPredicted RBP3.2□□□□□ -1.9
RGPD6-201ENST00000329516 B3GNT9Q6UX72 402 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 PLA2G4DQ86XP0 818 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 SCN5AQ14524 2016 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 TP53BP1Q12888 1972 aaPredicted RBP3.2□□□□□ -1.9
RGPD6-201ENST00000329516 WDR83Q9BRX9 315 aaKnown RBP3.2□□□□□ -1.9
RGPD6-201ENST00000329516 CYB5RLQ6IPT4 315 aa3.2□□□□□ -1.9
RGPD6-201ENST00000329516 PRPF6O94906 941 aaKnown RBP3.19□□□□□ -1.9
RGPD6-201ENST00000329516 MYBL2P10244 700 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 TPM4P67936 248 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 FGFBP2Q9BYJ0 223 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 ADAM7Q9H2U9 754 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 PLXND1Q9Y4D7 1925 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 GRIN2DO15399 1336 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 PLXNB3Q9ULL4 1909 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 AGGF1Q8N302 714 aaeCLIP3.19□□□□□ -1.9
RGPD6-201ENST00000329516 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.19□□□□□ -1.9
RGPD6-201ENST00000329516 SHKBP1Q8TBC3 707 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 TELO2Q9Y4R8 837 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 ASTN1O14525 1302 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.19□□□□□ -1.9
RGPD6-201ENST00000329516 LRRN2O75325 713 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 CYP21A2P08686 494 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 IRX5P78411 483 aaPredicted RBP3.19□□□□□ -1.9
RGPD6-201ENST00000329516 NCBP1Q09161 790 aaKnown RBP3.19□□□□□ -1.9
RGPD6-201ENST00000329516 TTC22Q5TAA0 569 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 CEP135Q66GS9 1140 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 PI16Q6UXB8 463 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 PPP4R3CPQ6ZMV5 832 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 C14orf37Q86TY3 774 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 TXNRD3Q86VQ6 643 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 P2RY11Q96G91 374 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 HERPUD2Q9BSE4 406 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 CTNNA3Q9UI47 895 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 DOCK4Q8N1I0 1966 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 PDE1AP54750 535 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 TTC3P53804 2025 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 ARHGAP25P42331 645 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 ME3Q16798 604 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 DHX40Q8IX18 779 aaKnown RBP3.19□□□□□ -1.9
RGPD6-201ENST00000329516 STAG3Q9UJ98 1225 aa3.19□□□□□ -1.9
RGPD6-201ENST00000329516 SGSM2O43147 1006 aa3.18□□□□□ -1.9
RGPD6-201ENST00000329516 OFD1O75665 1012 aa3.18□□□□□ -1.9
RGPD6-201ENST00000329516 PPM1FP49593 454 aaPredicted RBP3.18□□□□□ -1.9
RGPD6-201ENST00000329516 SETQ01105 290 aaPredicted RBP3.18□□□□□ -1.9
RGPD6-201ENST00000329516 CTDSPL2Q05D32 466 aa3.18□□□□□ -1.9
RGPD6-201ENST00000329516 FAM69CQ0P6D2 419 aa3.18□□□□□ -1.9
RGPD6-201ENST00000329516 WDR59Q6PJI9 974 aa3.18□□□□□ -1.9
RGPD6-201ENST00000329516 ZBTB9Q96C00 473 aa3.18□□□□□ -1.9
RGPD6-201ENST00000329516 GJD2Q9UKL4 321 aa3.18□□□□□ -1.9
RGPD6-201ENST00000329516 DMTNQ08495 405 aa3.18□□□□□ -1.9
RGPD6-201ENST00000329516 RRP1BQ14684 758 aaKnown RBP3.18□□□□□ -1.9
RGPD6-201ENST00000329516 RNF111Q6ZNA4 994 aa3.18□□□□□ -1.9
RGPD6-201ENST00000329516 C7orf31Q8N865 590 aa3.18□□□□□ -1.9
RGPD6-201ENST00000329516 RBM27Q9P2N5 1060 aaKnown RBP3.18□□□□□ -1.9
RGPD6-201ENST00000329516 CASP8AP2Q9UKL3 1982 aa3.18□□□□□ -1.9
RGPD6-201ENST00000329516 UNC79Q9P2D8 2635 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms