RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ZNF202O95125 648 aa18.82■□□□□ 0.6
CLIP4-201ENST00000320081 PHKG2P15735 406 aa18.82■□□□□ 0.6
CLIP4-201ENST00000320081 PRPF4BQ13523 1007 aaKnown RBP18.82■□□□□ 0.6
CLIP4-201ENST00000320081 CCDC191Q8NCU4 936 aa18.82■□□□□ 0.6
CLIP4-201ENST00000320081 BAG3O95817 575 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 NOP2P46087 812 aaKnown RBP18.81■□□□□ 0.6
CLIP4-201ENST00000320081 NAPAP54920 295 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 FAM182BQ5T319 152 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 SDR42E1Q8WUS8 393 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 CCDC113Q9H0I3 377 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 AATFQ9NY61 560 aaKnown RBP eCLIP18.81■□□□□ 0.6
CLIP4-201ENST00000320081 GUCA1BQ9UMX6 200 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 COBLO75128 1261 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 CHGBP05060 677 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 KRT40Q6A162 431 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 ZNF287Q9HBT7 754 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 SH3TC1Q8TE82 1336 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 HOXB7P09629 217 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 RHOXF2BP0C7M4 288 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 HSPD1P10809 573 aaKnown RBP18.81■□□□□ 0.6
CLIP4-201ENST00000320081 RHOXF2Q9BQY4 288 aa18.81■□□□□ 0.6
CLIP4-201ENST00000320081 FSD2A1L4K1 749 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 TMCO5BA8MYB1 307 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CAVIN2O95810 425 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 TNNI2P48788 182 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CCDC150Q8NCX0 1101 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 ADGBQ8N7X0 1667 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 ARHGEF5Q12774 1597 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 FGAP02671 866 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 ATP5JP18859 108 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 HLTFQ14527 1009 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CLSTN2Q9H4D0 955 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CWC15Q9P013 229 aaKnown RBP18.8■□□□□ 0.6
CLIP4-201ENST00000320081 VPS54Q9P1Q0 977 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 BCCIPQ9P287 314 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CNNM2Q9H8M5 875 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 SYNMO15061 1565 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 FAM47AQ5JRC9 791 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 TAF4BQ92750 862 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 CLIC6Q96NY7 704 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 LUC7LQ9NQ29 371 aaKnown RBP18.8■□□□□ 0.6
CLIP4-201ENST00000320081 HELLSQ9NRZ9 838 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 KCNH3Q9ULD8 1083 aa18.8■□□□□ 0.6
CLIP4-201ENST00000320081 PIK3AP1Q6ZUJ8 805 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 GNPATO15228 680 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 SASH1O94885 1247 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 EPHA10Q5JZY3 1008 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 KRI1Q8N9T8 703 aaKnown RBP18.79■□□□□ 0.6
CLIP4-201ENST00000320081 PAXBP1Q9Y5B6 917 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 ERBB4Q15303 1308 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 ZNF75DP51815 510 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 TMEM266Q2M3C6 531 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 CALML4Q96GE6 196 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 ZSWIM6Q9HCJ5 1215 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 PCDH11XQ9BZA7 1347 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 PCDH11YQ9BZA8 1340 aa18.79■□□□□ 0.6
CLIP4-201ENST00000320081 IGSF1Q8N6C5 1336 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 LETM2Q2VYF4 491 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 SLU7O95391 586 aaKnown RBP18.78■□□□□ 0.6
CLIP4-201ENST00000320081 GOLGA6L10A6NI86 522 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 GYG1P46976 350 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 PNOCQ13519 176 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 SYNE4Q8N205 404 aa18.78■□□□□ 0.6
CLIP4-201ENST00000320081 ECM2O94769 699 aaPredicted RBP18.77■□□□□ 0.6
CLIP4-201ENST00000320081 BCAMP50895 628 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 MYL5Q02045 173 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 SCRN1Q12765 414 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 WDR78Q5VTH9 848 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 PYCARDQ9ULZ3 195 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 GOLGA8FQ08AF8 430 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 RAD51AP2Q09MP3 1159 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 GOLGA8DPQ0D2H9 430 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 HS1BP3Q53T59 392 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 AIFM3Q96NN9 605 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 TMOD2Q9NZR1 351 aa18.77■□□□□ 0.6
CLIP4-201ENST00000320081 DNAJC21Q5F1R6 531 aaKnown RBP18.77■□□□□ 0.59
CLIP4-201ENST00000320081 ZNF569Q5MCW4 686 aa18.77■□□□□ 0.59
CLIP4-201ENST00000320081 SRRTQ9BXP5 876 aaKnown RBP18.77■□□□□ 0.59
CLIP4-201ENST00000320081 GREM2Q9H772 168 aa18.77■□□□□ 0.59
CLIP4-201ENST00000320081 EXOC1Q9NV70 894 aa18.77■□□□□ 0.59
CLIP4-201ENST00000320081 NFE2L3Q9Y4A8 694 aa18.77■□□□□ 0.59
CLIP4-201ENST00000320081 ARHGEF10O15013 1369 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 NEFHP12036 1026 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 HINFPQ9BQA5 517 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 SAMM50Q9Y512 469 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 PHKA1P46020 1223 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 ELF2Q15723 593 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 TMTC2Q8N394 836 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 PSMB7Q99436 277 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 XPO4Q9C0E2 1151 aaKnown RBP18.76■□□□□ 0.59
CLIP4-201ENST00000320081 AXIN2Q9Y2T1 843 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 FANCCQ00597 558 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 BLZF1Q9H2G9 400 aa18.76■□□□□ 0.59
CLIP4-201ENST00000320081 BTBD18B2RXH4 712 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 BRAPQ7Z569 592 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 CDR1P51861 262 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 UBXN1Q04323 297 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 MAP4K1Q92918 833 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 FEZ1Q99689 392 aa18.75■□□□□ 0.59
CLIP4-201ENST00000320081 RAB34Q9BZG1 259 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms